Homologs of PS417_12920 from Pseudomonas simiae WCS417

endoribonuclease
SEED: RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_12920 endoribonuclease insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS13590 RidA family protein insig. 86 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS13590 RidA family protein insig. 86 100
o Pseudomonas syringae pv. syringae B728a Psyr_3399 Endoribonuclease L-PSP insig. 65 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3399 Endoribonuclease L-PSP insig. 65 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_353 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 65 95
o Pseudomonas fluorescens FW300-N2C3 AO356_26795 reactive intermediate/imine deaminase insig. 66 94
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4209 Translation initiation inhibitor insig. 60 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03858 2-iminobutanoate/2-iminopropanoate deaminase cofit 62 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS16635 RidA family protein insig. 53 94
o Ralstonia solanacearum UW163 UW163_RS17990 RidA family protein insig. 53 94
o Ralstonia solanacearum PSI07 RPSI07_RS06815 RidA family protein insig. 52 94
o Sphingobium sp. HT1-2 GFF2064 RidA/YER057c/UK114 superfamily protein cofit 48 97
o Paraburkholderia graminis OAS925 ABIE53_003968 2-iminobutanoate/2-iminopropanoate deaminase insig. 47 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS19585 RidA family protein insig. 46 100
o Ralstonia solanacearum GMI1000 RS_RS24425 RidA family protein insig. 50 94
o Ralstonia sp. UNC404CL21Col ABZR87_RS17675 RidA family protein insig. 51 89
o Burkholderia phytofirmans PsJN BPHYT_RS15355 endoribonuclease L-PSP insig. 46 92
o Cupriavidus basilensis FW507-4G11 RR42_RS33455 endoribonuclease L-PSP insig. 44 99
  Burkholderia phytofirmans PsJN BPHYT_RS29300 endoribonuclease L-PSP insig. 41 96
o Variovorax sp. OAS795 ABID97_RS21535 RidA family protein no data 44 88
o Herbaspirillum seropedicae SmR1 HSERO_RS05705 endoribonuclease L-PSP insig. 46 88
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06511 reactive intermediate/imine deaminase insig. 43 88
  Methylophilus sp. DMC18 GFF1301 2-iminobutanoate/2-iminopropanoate deaminase cofit 41 96
  Ralstonia sp. UNC404CL21Col ABZR87_RS05790 RidA family protein insig. 42 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS38550 RidA family protein insig. 45 94
  Marinobacter adhaerens HP15 HP15_306 YjgF-like protein strong 35 94
  Pseudomonas fluorescens FW300-N2C3 AO356_16860 reactive intermediate/imine deaminase strong 39 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5297 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein insig. 39 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_12735 RidA family protein cofit 37 94
  Shewanella oneidensis MR-1 SO1404 endoribonuclease L-PSP, putative (NCBI ptt file) insig. 35 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS41190 RidA family protein no data 36 96
  Alteromonas macleodii MIT1002 MIT1002_00109 Putative reactive intermediate deaminase TdcF strong 33 94
  Shewanella oneidensis MR-1 SO0358 endoribonuclease L-PSP, putative (NCBI ptt file) strong 31 94
  Shewanella loihica PV-4 Shew_3500 putative endoribonuclease L-PSP (RefSeq) strong 31 94
  Fusobacterium nucleatum SB010 HUW76_10065 RidA family protein strong 38 97
  Cellulophaga baltica 18 M666_RS12150 RidA family protein insig. 34 94
  Lysobacter sp. OAE881 ABIE51_RS17260 RidA family protein strong 33 94
  Pseudomonas segetis P6 ACVTMO_RS00185 RidA family protein strong 37 95
  Shewanella sp. ANA-3 Shewana3_2971 putative endoribonuclease L-PSP (RefSeq) sig. 33 94
  Pseudomonas sp. S08-1 OH686_13545 RidA/YER057c/UK114 superfamily protein strong 35 93
  Acinetobacter radioresistens SK82 MPMX26_02797 2-iminobutanoate/2-iminopropanoate deaminase strong 36 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 35 95
  Shewanella sp. ANA-3 Shewana3_3813 putative endoribonuclease L-PSP (RefSeq) cofit 31 94
  Pseudomonas sp. SVBP6 COO64_RS01560 RidA family protein strong 34 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_779 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 34 95
  Pseudomonas fluorescens FW300-N2E3 AO353_09285 reactive intermediate/imine deaminase strong 34 95
  Escherichia coli BL21 ECD_02980 putative reactive intermediate deaminase insig. 34 94
  Escherichia fergusonii Becca EFB2_00701 Putative reactive intermediate deaminase TdcF insig. 34 94
  Escherichia coli ECOR27 NOLOHH_10200 tdcF enamine/imine deaminase insig. 34 94
  Escherichia coli ECOR38 HEPCGN_17255 tdcF enamine/imine deaminase insig. 34 94
  Escherichia coli ECRC100 OKFHMN_18420 tdcF enamine/imine deaminase insig. 34 94
  Escherichia coli ECRC101 MCAODC_08935 tdcF enamine/imine deaminase insig. 34 94
  Escherichia coli ECRC102 NIAGMN_16185 tdcF enamine/imine deaminase insig. 34 94
  Escherichia coli ECRC62 BNILDI_01325 tdcF enamine/imine deaminase insig. 34 94
  Escherichia coli ECRC98 JDDGAC_22055 tdcF enamine/imine deaminase insig. 34 94
  Escherichia coli ECRC99 KEDOAH_09725 tdcF enamine/imine deaminase no data 34 94
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00587 Putative reactive intermediate deaminase TdcF insig. 34 94
  Escherichia coli Nissle 1917 ECOLIN_RS17920 enamine/imine deaminase insig. 34 94
  Escherichia coli BW25113 b3113 yhaR orf, hypothetical protein (VIMSS) strong 34 94
  Pseudomonas fluorescens SBW25 PFLU_RS29515 RidA family protein strong 34 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29515 RidA family protein strong 34 95
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00035 2-iminobutanoate/2-iminopropanoate deaminase strong 34 95
  Pseudomonas orientalis W4I3 QF045_RS02190 RidA family protein strong 34 95
  Pseudomonas simiae WCS417 PS417_27835 endoribonuclease strong 34 95
  Pseudomonas aeruginosa MRSN321 DY961_RS12585 RidA family protein strong 34 94
  Pseudomonas aeruginosa PA14 IKLFDK_26760 reactive intermediate/imine deaminase strong 34 94
  Pseudomonas aeruginosa PUPa3 DQ20_RS49540 RidA family protein strong 34 94
  Pseudomonas sp. DMC3 GFF420 2-iminobutanoate/2-iminopropanoate deaminase strong 34 95
  Pseudomonas fluorescens FW300-N2C3 AO356_12475 reactive intermediate/imine deaminase strong 34 95
  Pseudomonas sp. BP01 JOY50_RS08980 RidA family protein cofit 35 95
  Dechlorosoma suillum PS Dsui_0312 endoribonuclease L-PSP, putative no data 36 94
  Acinetobacter baumannii LAC-4 RR41_RS01650 RidA family protein sig. 35 94
  Pseudomonas sp. RS175 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase strong 34 95
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18400 RidA family protein strong 36 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2112 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 33 94
  Azospirillum brasilense Sp245 AZOBR_RS04910 endoribonuclease L-PSP insig. 40 94
  Escherichia coli BL21 ECD_04111 enamine/imine deaminase, reaction intermediate detoxification strong 37 96
  Escherichia fergusonii Becca EFB2_04290 2-iminobutanoate/2-iminopropanoate deaminase sig. 37 96
  Escherichia coli ECOR27 NOLOHH_04135 ridA 2-iminobutanoate/2-iminopropanoate deaminase insig. 37 96
  Escherichia coli ECOR38 HEPCGN_10070 ridA 2-iminobutanoate/2-iminopropanoate deaminase insig. 37 96
  Escherichia coli ECRC100 OKFHMN_11875 ridA 2-iminobutanoate/2-iminopropanoate deaminase cofit 37 96
  Escherichia coli ECRC101 MCAODC_02380 ridA 2-iminobutanoate/2-iminopropanoate deaminase strong 37 96
  Escherichia coli ECRC102 NIAGMN_09725 ridA 2-iminobutanoate/2-iminopropanoate deaminase strong 37 96
  Escherichia coli ECRC62 BNILDI_07375 ridA 2-iminobutanoate/2-iminopropanoate deaminase cofit 37 96
  Escherichia coli ECRC98 JDDGAC_15515 ridA 2-iminobutanoate/2-iminopropanoate deaminase cofit 37 96
  Escherichia coli ECRC99 KEDOAH_16280 ridA 2-iminobutanoate/2-iminopropanoate deaminase no data 37 96
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03791 2-iminobutanoate/2-iminopropanoate deaminase insig. 37 96
  Escherichia coli Nissle 1917 ECOLIN_RS24615 2-iminobutanoate/2-iminopropanoate deaminase insig. 37 96
  Escherichia coli BW25113 b4243 yjgF orf, hypothetical protein (VIMSS) strong 37 96
  Shewanella amazonensis SB2B Sama_0263 YjgF-like protein (RefSeq) strong 31 94
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1327 endoribonuclease L-PSP, putative sig. 31 94
  Klebsiella pneumoniae MKP103 KDGMDA_10250 reactive intermediate/imine deaminase insig. 42 92
  Azospirillum brasilense Sp245 AZOBR_RS32435 dfrA insig. 39 95
  Bacteroides stercoris CC31F HMPREF1181_RS10885 RidA family protein strong 39 97
  Phocaeicola dorei CL03T12C01 ABI39_RS14715 RidA family protein strong 36 94
  Pseudomonas putida KT2440 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase strong 34 94
  Pseudomonas stutzeri RCH2 Psest_3818 endoribonuclease L-PSP, putative strong 34 94
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS20925 endoribonuclease L-PSP strong 37 100
  Ralstonia solanacearum UW163 UW163_RS22060 endoribonuclease L-PSP insig. 37 100