Homologs of GFF195 from Variovorax sp. SCN45

RidA/YER057c/UK114 superfamily, group 1
SEED: Putative translation initiation inhibitor, yjgF family

79 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF195 RidA/YER057c/UK114 superfamily, group 1 insig. 100 100
o Pseudomonas fluorescens FW300-N2E3 AO353_14625 hypothetical protein insig. 59 94
o Acidovorax sp. GW101-3H11 Ac3H11_3793 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 63 92
o Pseudomonas fluorescens SBW25 PFLU_RS16860 RidA family protein insig. 50 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS16860 RidA family protein strong 50 97
o Pseudomonas simiae WCS417 PS417_14845 endoribonuclease L-PSP insig. 49 97
o Pseudomonas sp. DMC3 GFF4390 hypothetical protein insig. 48 89
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4927 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein insig. 46 92
o Cupriavidus basilensis FW507-4G11 RR42_RS26810 endoribonuclease insig. 43 88
o Pseudomonas aeruginosa MRSN321 DY961_RS08425 RidA family protein insig. 44 83
o Pseudomonas aeruginosa PUPa3 DQ20_RS44425 RidA family protein insig. 44 83
o Pseudomonas aeruginosa PA14 IKLFDK_03535 RidA family protein insig. 44 83
  Sinorhizobium meliloti 1021 SMc02103 hypothetical protein insig. 39 87
  Mycobacterium tuberculosis H37Rv Rv3678c Conserved protein no data 48 77
  Burkholderia phytofirmans PsJN BPHYT_RS13395 endoribonuclease L-PSP insig. 43 80
  Rhodopseudomonas palustris CGA009 TX73_016220 RidA family protein sig. 46 76
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2685 Putative translation initiation inhibitor, yjgF family strong 42 73
  Rhizobium sp. OAE497 ABIE40_RS08890 RidA family protein insig. 38 89
  Xanthobacter sp. DMC5 GFF387 hypothetical protein sig. 39 78
  Magnetospirillum magneticum AMB-1 AMB_RS13835 RidA family protein insig. 38 85
  Cellulophaga baltica 18 M666_RS04690 RidA family protein insig. 38 78
  Agrobacterium fabrum C58 Atu3265 hypothetical protein insig. 37 98
  Pseudomonas sp. BP01 JOY50_RS05210 RidA family protein no data 40 90
  Burkholderia phytofirmans PsJN BPHYT_RS10460 endoribonuclease no data 44 77
  Agrobacterium fabrum C58 Atu1372 hypothetical protein strong 36 87
  Pseudomonas sp. BP01 JOY50_RS05535 RidA family protein no data 42 80
  Azospirillum sp. SherDot2 MPMX19_00535 hypothetical protein insig. 41 74
  Rhodospirillum rubrum S1H Rru_A2457 Endoribonuclease L-PSP (NCBI) no data 40 76
  Azospirillum brasilense Sp245 AZOBR_RS05145 endoribonuclease sig. 41 72
  Rhizobium sp. OAE497 ABIE40_RS26075 RidA family protein insig. 36 97
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08380 RidA family protein strong 38 87
  Variovorax sp. SCN45 GFF4151 RidA/YER057c/UK114 superfamily, group 1 insig. 41 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS24665 RidA family protein insig. 39 76
  Sphingobium sp. HT1-2 GFF3346 RidA/YER057c/UK114 superfamily, group 1 cofit 40 71
  Caulobacter crescentus NA1000 CCNA_02241 endoribonuclease L-PSP strong 39 78
  Caulobacter crescentus NA1000 Δfur CCNA_02241 endoribonuclease L-PSP insig. 39 78
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2090 Putative translation initiation inhibitor, yjgF family insig. 34 88
  Phaeobacter inhibens DSM 17395 PGA1_c29320 putative endoribonuclease L-PSP sig. 35 85
  Bosea sp. OAE506 ABIE41_RS21995 RidA family protein insig. 34 90
  Dinoroseobacter shibae DFL-12 Dshi_0137 Endoribonuclease L-PSP (RefSeq) strong 37 85
  Burkholderia phytofirmans PsJN BPHYT_RS05960 endoribonuclease L-PSP strong 36 76
  Paraburkholderia graminis OAS925 ABIE53_001398 enamine deaminase RidA (YjgF/YER057c/UK114 family) strong 36 76
  Acidovorax sp. GW101-3H11 Ac3H11_268 Bona fide RidA/YjgF/TdcF/RutC subgroup sig. 37 76
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00270 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family strong 36 76
  Cupriavidus basilensis FW507-4G11 RR42_RS14585 L-PSP family endoribonuclease sig. 40 75
  Herbaspirillum seropedicae SmR1 HSERO_RS09045 translation initiation inhibitor protein no data 37 76
  Ralstonia solanacearum GMI1000 RS_RS04880 RidA family protein no data 38 77
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5556 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 34 88
  Variovorax sp. SCN45 GFF116 RidA/YER057c/UK114 superfamily, group 1 insig. 38 76
  Pseudomonas sp. SVBP6 COO64_RS23680 RidA family protein insig. 34 77
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10595 NAD(P)H:quinone oxidoreductase, type IV insig. 33 77
  Burkholderia phytofirmans PsJN BPHYT_RS35560 endoribonuclease L-PSP insig. 40 73
  Pseudomonas simiae WCS417 PS417_06660 endoribonuclease insig. 42 76
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01472 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 35 85
  Pseudomonas fluorescens SBW25 PFLU_RS06690 RidA family protein insig. 40 76
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06690 RidA family protein insig. 40 76
  Bosea sp. OAE506 ABIE41_RS18195 RidA family protein insig. 32 88
  Ralstonia sp. UNC404CL21Col ABZR87_RS09820 RidA family protein insig. 35 73
  Variovorax sp. OAS795 ABID97_RS20010 RidA family protein no data 32 74
  Variovorax sp. SCN45 GFF2690 RidA/YER057c/UK114 superfamily, group 1 no data 31 74
  Variovorax sp. SCN45 GFF3327 RidA/YER057c/UK114 superfamily, group 1 insig. 35 71
  Ralstonia solanacearum PSI07 RPSI07_RS19360 RidA family protein no data 35 70
  Ralstonia sp. UNC404CL21Col ABZR87_RS08380 RidA family protein insig. 32 75
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14100 RidA family protein no data 34 73
  Ralstonia solanacearum UW163 UW163_RS15710 RidA family protein insig. 34 73
  Variovorax sp. OAS795 ABID97_RS02865 RidA family protein insig. 36 74
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1690 Putative translation initiation inhibitor, yjgF family no data 38 72
  Variovorax sp. OAS795 ABID97_RS01340 RidA family protein insig. 30 75
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3623 Endoribonuclease L-PSP insig. 33 87
  Shewanella oneidensis MR-1 SO1960 conserved hypothetical protein (NCBI ptt file) insig. 25 77
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11845 RidA family protein strong 30 77
  Shewanella sp. ANA-3 Shewana3_3813 putative endoribonuclease L-PSP (RefSeq) cofit 28 78
  Shewanella oneidensis MR-1 SO0358 endoribonuclease L-PSP, putative (NCBI ptt file) strong 28 78
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 26 77
  Pseudomonas sp. DMC3 GFF420 2-iminobutanoate/2-iminopropanoate deaminase strong 25 77
  Pseudomonas fluorescens FW300-N2C3 AO356_12475 reactive intermediate/imine deaminase strong 25 77
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1205.1 hypothetical protein cofit 32 77
  Pseudomonas putida KT2440 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase strong 26 77
  Pseudomonas sp. BP01 JOY50_RS08980 RidA family protein cofit 26 77