Homologs of GFF1645 from Variovorax sp. SCN45

Sigma factor PvdS, controling pyoverdin biosynthesis
SEED: Sigma factor PvdS, controling pyoverdin biosynthesis
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF1645 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 100 100
o Variovorax sp. OAS795 ABID97_RS21515 sigma-70 family RNA polymerase sigma factor no data 57 98
o Herbaspirillum seropedicae SmR1 HSERO_RS11705 extracytoplasmic-function sigma-70 factor insig. 46 93
o Azospirillum sp. SherDot2 MPMX19_03247 putative RNA polymerase sigma factor FecI insig. 41 91
o Azospirillum brasilense Sp245 AZOBR_RS23325 RNA polymerase sigma70 insig. 41 91
o Pseudomonas putida KT2440 PP_4244 alternative sigma factor sig. 37 95
  Burkholderia phytofirmans PsJN BPHYT_RS20215 RNA polymerase sigma 70 sig. 38 90
o Pseudomonas sp. BP01 JOY50_RS00025 RNA polymerase factor sigma-70 insig. 37 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS15840 RNA polymerase factor sigma-70 sig. 37 93
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04111 hypothetical protein insig. 38 90
o Pseudomonas sp. SVBP6 COO64_RS18740 RNA polymerase factor sigma-70 cofit 36 95
o Pseudomonas orientalis W4I3 QF045_RS21700 RNA polymerase factor sigma-70 no data 38 90
o Pseudomonas fluorescens SBW25 PFLU_RS21525 RNA polymerase factor sigma-70 insig. 38 90
o Pseudomonas fluorescens SBW25-INTG PFLU_RS21525 RNA polymerase factor sigma-70 sig. 38 90
o Pseudomonas simiae WCS417 PS417_19555 RNA polymerase sigma70 strong 38 90
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2293 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 37 90
o Pseudomonas sp. DMC3 GFF4554 hypothetical protein cofit 37 90
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_216 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 37 90
o Pseudomonas fluorescens FW300-N2E3 AO353_19345 RNA polymerase subunit sigma-70 insig. 37 90
o Pseudomonas sp. RS175 PFR28_01023 hypothetical protein sig. 37 90
o Pseudomonas fluorescens FW300-N2C3 AO356_02895 RNA polymerase subunit sigma-70 strong 37 90
o Pseudomonas aeruginosa MRSN321 DY961_RS18585 pvdS;inference=COORDINATES pyoverdine signaling pathway sigma factor PvdS insig. 36 95
o Pseudomonas aeruginosa PA14 IKLFDK_11920 pyoverdine signaling pathway sigma factor PvdS sig. 36 95
o Pseudomonas aeruginosa PUPa3 DQ20_RS59800 pvdS;inference=COORDINATES pyoverdine signaling pathway sigma factor PvdS insig. 36 95
  Pseudomonas syringae pv. syringae B728a Psyr_1943 Sigma-70 region 2 strong 38 90
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1943 Sigma-70 region 2 sig. 38 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2404 Sigma factor PvdS, controling pyoverdin biosynthesis sig. 37 88
  Pseudomonas sp. S08-1 OH686_01025 hypothetical protein insig. 33 89
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 35 92
  Sphingobium sp. HT1-2 GFF5333 sigma factor cofit 32 83
  Xanthobacter sp. DMC5 GFF2704 putative RNA polymerase sigma factor FecI insig. 28 85
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 31 93
  Rhodospirillum rubrum S1H Rru_A2397 Sigma-24 (FecI) (NCBI) insig. 32 85
  Klebsiella pneumoniae MKP103 KDGMDA_00205 RNA polymerase sigma factor FecI insig. 27 95
  Variovorax sp. SCN45 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 27 88
  Pseudomonas sp. RS175 PFR28_02540 putative RNA polymerase sigma factor FecI insig. 30 88
  Pseudomonas sp. BP01 JOY50_RS04635 sigma-70 family RNA polymerase sigma factor insig. 35 75
  Rhodospirillum rubrum S1H Rru_A0883 Sigma-24 (FecI) (NCBI) insig. 34 89
  Pseudomonas orientalis W4I3 QF045_RS00470 RNA polymerase sigma factor insig. 30 85
  Pseudomonas fluorescens FW300-N2C3 AO356_05230 RNA polymerase subunit sigma-24 insig. 32 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_398 FIG006045: Sigma factor, ECF subfamily insig. 31 93
  Pseudomonas fluorescens SBW25 PFLU_RS27705 RNA polymerase sigma factor insig. 30 85
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27705 RNA polymerase sigma factor insig. 30 85
  Escherichia coli BL21 ECD_04159 RNA polymerase sigma-19 factor, fec operon-specific; ECF sigma factor insig. 27 95
  Escherichia coli Nissle 1917 ECOLIN_RS25750 RNA polymerase sigma factor FecI insig. 27 95
  Escherichia coli BW25113 b4293 fecI KpLE2 phage-like element; RNA polymerase, sigma 19 factor (NCBI) strong 27 95
  Escherichia coli ECOR38 HEPCGN_09830 fecI RNA polymerase sigma factor FecI insig. 27 95
  Azospirillum brasilense Sp245 AZOBR_RS29160 putative RNA polymerase sigma-70 factor ECF subfamily insig. 31 90
  Xanthobacter sp. DMC5 GFF2135 putative RNA polymerase sigma factor FecI insig. 30 86
  Klebsiella michiganensis M5al BWI76_RS11395 RNA polymerase sigma factor FecI strong 26 86
  Pseudomonas fluorescens FW300-N2C3 AO356_14080 RNA polymerase subunit sigma insig. 29 82
  Pseudomonas sp. BP01 JOY50_RS26335 sigma-70 family RNA polymerase sigma factor insig. 30 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2900 FIG006045: Sigma factor, ECF subfamily insig. 30 87
  Pseudomonas simiae WCS417 PS417_26065 RNA polymerase sigma factor insig. 29 85
  Pseudomonas segetis P6 ACVTMO_RS15980 sigma-70 family RNA polymerase sigma factor insig. 28 95
  Pseudomonas simiae WCS417 PS417_22700 RNA polymerase subunit sigma-24 strong 30 87
  Pseudomonas sp. BP01 JOY50_RS07315 sigma-70 family RNA polymerase sigma factor insig. 29 93
  Variovorax sp. SCN45 GFF96 RNA polymerase ECF-type sigma factor insig. 29 84
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02135 putative RNA polymerase sigma factor FecI cofit 27 90
  Cupriavidus basilensis FW507-4G11 RR42_RS28810 RNA polymerase sigma factor no data 34 81
  Bacteroides ovatus ATCC 8483 BACOVA_03554 RNA polymerase sigma-70 factor cofit 28 83
  Pseudomonas sp. SVBP6 COO64_RS22780 RNA polymerase sigma factor insig. 28 85
  Pseudomonas simiae WCS417 PS417_09655 RNA polymerase sigma factor insig. 27 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4748 RNA polymerase sigma-70 factor, ECF subfamily insig. 31 65
  Pseudomonas sp. BP01 JOY50_RS10270 RNA polymerase sigma factor no data 31 88
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 32 77
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05333 putative RNA polymerase sigma factor FecI insig. 32 68
  Pseudomonas fluorescens SBW25 PFLU_RS24340 sigma-70 family RNA polymerase sigma factor insig. 30 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24340 sigma-70 family RNA polymerase sigma factor strong 30 87
  Pseudomonas putida KT2440 PP_3577 RNA polymerase, sigma 19 factor insig. 29 93
  Pseudomonas sp. SVBP6 COO64_RS10870 sigma-70 family RNA polymerase sigma factor insig. 29 96
  Pseudomonas sp. BP01 JOY50_RS17880 RNA polymerase sigma factor insig. 28 90
  Pseudomonas sp. SVBP6 COO64_RS14455 sigma-70 family RNA polymerase sigma factor insig. 37 70
  Pseudomonas sp. DMC3 GFF87 putative RNA polymerase sigma factor FecI insig. 31 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1135 RNA polymerase sigma-70 factor, ECF subfamily insig. 30 65
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2474 RNA polymerase sigma-70 factor, ECF subfamily insig. 32 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2440 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 29 82
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0584 RNA polymerase sigma factor, sigma-70 family insig. 34 69
  Azospirillum sp. SherDot2 MPMX19_03082 ECF RNA polymerase sigma factor SigE insig. 30 90
  Pseudomonas simiae WCS417 PS417_09740 RNA polymerase subunit sigma-24 insig. 30 82
  Variovorax sp. SCN45 GFF5284 RNA polymerase ECF-type sigma factor insig. 34 79
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04694 ECF RNA polymerase sigma factor SigE cofit 30 87
  Pseudomonas sp. RS175 PFR28_04114 putative RNA polymerase sigma factor FecI insig. 28 85
  Pseudomonas fluorescens FW300-N2C3 AO356_21710 RNA polymerase subunit sigma insig. 32 81
  Pseudomonas sp. SVBP6 COO64_RS03795 RNA polymerase sigma factor insig. 31 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2098 heme uptake regulator insig. 31 95
  Pseudomonas orientalis W4I3 QF045_RS24870 sigma-70 family RNA polymerase sigma factor insig. 30 87
  Variovorax sp. SCN45 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 29 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_604 FIG006045: Sigma factor, ECF subfamily insig. 28 87
  Paraburkholderia graminis OAS925 ABIE53_002674 RNA polymerase sigma factor (sigma-70 family) insig. 28 91
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09455 RNA polymerase sigma factor insig. 33 85
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19630 RNA polymerase sigma factor sig. 29 72
  Ralstonia solanacearum UW163 UW163_RS19545 RNA polymerase sigma factor insig. 29 72
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2727 FIG006045: Sigma factor, ECF subfamily insig. 28 79
  Pseudomonas putida KT2440 PP_0352 RNA polymerase sigma-70 factor, ECF subfamily sig. 27 90
  Pectobacterium carotovorum WPP14 HER17_RS17615 sigma-70 family RNA polymerase sigma factor insig. 26 86
  Variovorax sp. SCN45 GFF6854 RNA polymerase ECF-type sigma factor insig. 30 90
  Pseudomonas sp. SVBP6 COO64_RS08375 sigma-70 family RNA polymerase sigma factor insig. 29 82
  Pseudomonas sp. RS175 PFR28_02859 putative RNA polymerase sigma factor FecI insig. 29 89
  Pseudomonas sp. DMC3 GFF2767 putative RNA polymerase sigma factor FecI insig. 30 95
  Pseudomonas sp. BP01 JOY50_RS02515 sigma-70 family RNA polymerase sigma factor insig. 27 82
  Variovorax sp. SCN45 GFF794 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 29 87
  Methylophilus sp. DMC18 GFF1862 putative RNA polymerase sigma factor FecI insig. 27 91
  Pseudomonas fluorescens FW300-N2C3 AO356_07625 RNA polymerase subunit sigma insig. 32 77
  Ralstonia solanacearum GMI1000 RS_RS21190 RNA polymerase sigma factor cofit 29 72
  Ralstonia solanacearum PSI07 RPSI07_RS03580 RNA polymerase sigma factor insig. 29 72
  Sphingobium sp. HT1-2 GFF2715 sigma factor insig. 29 89
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13620 RNA polymerase subunit sigma insig. 32 80
  Bacteroides thetaiotaomicron VPI-5482 BT4402 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 25 86
  Pseudomonas sp. DMC3 GFF1353 putative RNA polymerase sigma factor FecI cofit 30 82
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 30 77
  Serratia liquefaciens MT49 IAI46_11745 sigma-70 family RNA polymerase sigma factor no data 26 88
  Pseudomonas sp. RS175 PFR28_00559 ECF RNA polymerase sigma factor SigE insig. 30 87
  Sinorhizobium meliloti 1021 SMc04203 RNA polymerase sigma factor FECI protein insig. 27 84
  Sphingobium sp. HT1-2 GFF5314 hypothetical protein cofit 26 80
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0778 RNA polymerase sigma factor, sigma-70 family insig. 32 78
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02847 putative RNA polymerase sigma factor FecI no data 29 91
  Pseudomonas syringae pv. syringae B728a Psyr_1107 Sigma-70 region 2 insig. 29 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1107 Sigma-70 region 2 insig. 29 85
  Methylophilus sp. DMC18 GFF230 hypothetical protein insig. 28 76
  Pseudomonas orientalis W4I3 QF045_RS12270 sigma-70 family RNA polymerase sigma factor insig. 27 82
  Bacteroides ovatus ATCC 8483 BACOVA_04866 RNA polymerase sigma-70 factor insig. 26 82
  Herbaspirillum seropedicae SmR1 HSERO_RS14150 RNA polymerase sigma factor insig. 31 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_118 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 28 82
  Pseudomonas aeruginosa MRSN321 DY961_RS18835 RNA polymerase sigma factor sig. 27 94
  Pseudomonas aeruginosa PA14 IKLFDK_06170 RNA polymerase subunit sigma no data 27 94
  Pseudomonas aeruginosa PUPa3 DQ20_RS52975 RNA polymerase sigma factor insig. 27 94
  Pseudomonas orientalis W4I3 QF045_RS24135 sigma-70 family RNA polymerase sigma factor insig. 27 65
  Pseudomonas syringae pv. syringae B728a Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 28 86
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 28 86
  Pseudomonas sp. DMC3 GFF5154 hypothetical protein insig. 27 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3412 FIG006045: Sigma factor, ECF subfamily insig. 32 77
  Pectobacterium carotovorum WPP14 HER17_RS15360 sigma-70 family RNA polymerase sigma factor insig. 31 72
  Dechlorosoma suillum PS Dsui_1673 RNA polymerase sigma factor, sigma-70 family no data 27 88
  Bacteroides ovatus ATCC 8483 BACOVA_03855 RNA polymerase sigma-70 factor insig. 26 82
  Pseudomonas fluorescens FW300-N2E3 AO353_03435 RNA polymerase subunit sigma-24 insig. 28 92
  Dickeya dadantii 3937 DDA3937_RS03525 sigma-70 family RNA polymerase sigma factor insig. 25 85
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05575 RNA polymerase sigma-70 factor insig. 25 89
  Pseudomonas sp. RS175 PFR28_00037 putative RNA polymerase sigma factor FecI insig. 34 77
  Pseudomonas sp. BP01 JOY50_RS12755 sigma-70 family RNA polymerase sigma factor insig. 36 80
  Variovorax sp. SCN45 GFF1723 Extracytoplasmic function (ECF) sigma factor VreI no data 31 78
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3924 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 29 71
  Variovorax sp. SCN45 GFF791 RNA polymerase sigma factor RpoE insig. 27 87
  Rhodopseudomonas palustris CGA009 TX73_012350 RNA polymerase sigma factor insig. 31 93
  Pseudomonas orientalis W4I3 QF045_RS08085 sigma-70 family RNA polymerase sigma factor insig. 30 73
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_29 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 27 82
  Pseudomonas fluorescens SBW25 PFLU_RS13600 sigma-70 family RNA polymerase sigma factor insig. 28 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13600 sigma-70 family RNA polymerase sigma factor insig. 28 91
  Bacteroides thetaiotaomicron VPI-5482 BT4250 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 27 74
  Pseudomonas aeruginosa MRSN321 DY961_RS16685 sigma-70 family RNA polymerase sigma factor sig. 29 73
  Pseudomonas aeruginosa PA14 IKLFDK_10240 RNA polymerase subunit sigma sig. 29 73
  Pseudomonas aeruginosa PUPa3 DQ20_RS38970 sigma-70 family RNA polymerase sigma factor insig. 29 73
  Pseudomonas fluorescens FW300-N2C3 AO356_21215 RNA polymerase subunit sigma-24 insig. 27 82
  Pseudomonas stutzeri RCH2 Psest_0650 RNA polymerase sigma factor, sigma-70 family insig. 31 88
  Pseudomonas simiae WCS417 PS417_12935 RNA polymerase sigma factor insig. 28 91
  Pseudomonas sp. BP01 JOY50_RS22200 sigma-70 family RNA polymerase sigma factor insig. 27 93
  Azospirillum brasilense Sp245 AZOBR_RS30810 RNA polymerase sigma70 insig. 30 84
  Pseudomonas sp. SVBP6 COO64_RS10835 sigma-70 family RNA polymerase sigma factor insig. 29 93
  Rhodopseudomonas palustris CGA009 TX73_006880 sigma-70 family RNA polymerase sigma factor insig. 29 78
  Pseudomonas sp. SVBP6 COO64_RS04525 RNA polymerase sigma factor insig. 29 87
  Variovorax sp. SCN45 GFF4185 RNA polymerase ECF-type sigma factor insig. 32 90
  Pseudomonas aeruginosa MRSN321 DY961_RS22365 RNA polymerase sigma factor insig. 30 65
  Pseudomonas aeruginosa PA14 IKLFDK_23065 RNA polymerase sigma factor sig. 30 65
  Pseudomonas aeruginosa PUPa3 DQ20_RS36960 RNA polymerase sigma factor insig. 30 65
  Pseudomonas sp. SVBP6 COO64_RS19180 sigma-70 family RNA polymerase sigma factor insig. 29 93
  Pseudomonas sp. BP01 JOY50_RS11380 RNA polymerase sigma factor insig. 28 87
  Pseudomonas putida KT2440 PP_1008 RNA polymerase subunit sigma-24 strong 28 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3565 heme uptake regulator insig. 27 95
  Herbaspirillum seropedicae SmR1 HSERO_RS22395 RNA polymerase sigma factor insig. 27 89
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1886 FIG006045: Sigma factor, ECF subfamily insig. 26 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15190 RNA polymerase sigma-70 factor insig. 24 87
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 33 74
  Ralstonia solanacearum GMI1000 RS_RS19160 RNA polymerase sigma factor sig. 31 68
  Cupriavidus basilensis FW507-4G11 RR42_RS31145 RNA polymerase sigma factor insig. 30 81
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_21 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis sig. 29 78
  Pseudomonas sp. DMC3 GFF1889 putative RNA polymerase sigma factor FecI cofit 26 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_563 RNA polymerase sigma-70 factor insig. 22 87
  Pseudomonas sp. BP01 JOY50_RS26950 sigma-70 family RNA polymerase sigma factor insig. 32 81
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 29 68
  Pseudomonas orientalis W4I3 QF045_RS19140 sigma-70 family RNA polymerase sigma factor insig. 29 77
  Pseudomonas aeruginosa MRSN321 DY961_RS28585 sigma-70 family RNA polymerase sigma factor insig. 28 80
  Pseudomonas aeruginosa PA14 IKLFDK_09340 RNA polymerase subunit sigma no data 28 80
  Pseudomonas aeruginosa PUPa3 DQ20_RS38070 sigma-70 family RNA polymerase sigma factor no data 28 80
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 27 86
  Pseudomonas sp. DMC3 GFF2735 putative RNA polymerase sigma factor FecI cofit 26 89
  Pseudomonas sp. SVBP6 COO64_RS02925 RNA polymerase sigma factor insig. 27 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0532 RNA polymerase sigma factor, sigma-70 family insig. 34 63
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0766 RNA polymerase sigma factor, sigma-70 family insig. 30 71
  Pseudomonas sp. RS175 PFR28_02867 putative RNA polymerase sigma factor FecI insig. 29 78
  Alteromonas macleodii MIT1002 MIT1002_03202 Sigma-K factor insig. 28 90
  Sphingobium sp. HT1-2 GFF4091 hypothetical protein insig. 27 83
  Dechlorosoma suillum PS Dsui_2948 RNA polymerase sigma factor, sigma-70 family insig. 27 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_6050 RNA polymerase sigma-70 factor, ECF subfamily insig. 26 93
  Pseudomonas fluorescens SBW25 PFLU_RS11840 RNA polymerase sigma factor insig. 29 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11840 RNA polymerase sigma factor sig. 29 90
  Pseudomonas sp. RS175 PFR28_00232 putative RNA polymerase sigma factor FecI insig. 24 89
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09910 hypothetical protein insig. 31 69
  Dechlorosoma suillum PS Dsui_2977 RNA polymerase sigma factor, sigma-70 family insig. 30 70
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4951 FIG006045: Sigma factor, ECF subfamily insig. 29 89
  Variovorax sp. SCN45 GFF1727 no description insig. 29 88
  Pseudomonas sp. BP01 JOY50_RS12990 sigma-70 family RNA polymerase sigma factor insig. 28 84
  Pseudomonas sp. DMC3 GFF759 putative RNA polymerase sigma factor FecI insig. 28 79
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01226 putative RNA polymerase sigma factor FecI cofit 27 73
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06415 RNA polymerase sigma factor insig. 26 86
  Pseudomonas putida KT2440 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily strong 25 94
  Pseudomonas aeruginosa MRSN321 DY961_RS10260 sigma-70 family RNA polymerase sigma factor insig. 28 72
  Pseudomonas aeruginosa PUPa3 DQ20_RS51795 sigma-70 family RNA polymerase sigma factor insig. 28 72
  Methylophilus sp. DMC18 GFF1839 hypothetical protein insig. 28 75
  Pseudomonas fluorescens SBW25 PFLU_RS05170 sigma-70 family RNA polymerase sigma factor insig. 28 73
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05170 sigma-70 family RNA polymerase sigma factor strong 28 73
  Variovorax sp. SCN45 GFF1525 RNA polymerase ECF-type sigma factor insig. 25 89
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02400 RNA polymerase sigma factor cofit 29 71
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09605 RNA polymerase sigma-70 factor insig. 29 74
  Pseudomonas sp. BP01 JOY50_RS19220 RNA polymerase sigma factor insig. 26 85
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.715.1 RNA polymerase sigma factor insig. 29 74
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21465 RNA polymerase sigma factor insig. 29 76
  Ralstonia solanacearum UW163 UW163_RS17725 RNA polymerase sigma factor insig. 29 76
  Pseudomonas aeruginosa PUPa3 DQ20_RS41200 RNA polymerase sigma factor insig. 29 97
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00175 putative RNA polymerase sigma factor FecI cofit 29 82
  Pseudomonas orientalis W4I3 QF045_RS02910 sigma-70 family RNA polymerase sigma factor insig. 26 68
  Pseudomonas fluorescens SBW25 PFLU_RS30180 sigma-70 family RNA polymerase sigma factor insig. 27 82
  Pseudomonas fluorescens SBW25-INTG PFLU_RS30180 sigma-70 family RNA polymerase sigma factor insig. 27 82
  Pseudomonas aeruginosa MRSN321 DY961_RS15880 RNA polymerase sigma factor sig. 29 97
  Pseudomonas aeruginosa PA14 IKLFDK_17505 RNA polymerase subunit sigma-70 insig. 29 97
  Pseudomonas aeruginosa PA14 IKLFDK_29070 RNA polymerase subunit sigma insig. 28 72
  Pseudomonas fluorescens FW300-N2C3 AO356_26280 RNA polymerase subunit sigma insig. 27 93
  Pseudomonas putida KT2440 PP_0667 RNA polymerase sigma-70 factor, ECF subfamily insig. 27 91
  Variovorax sp. SCN45 GFF4261 RNA polymerase ECF-type sigma factor insig. 26 84
  Rhodopseudomonas palustris CGA009 TX73_006850 RNA polymerase sigma factor insig. 30 90
  Pseudomonas sp. BP01 JOY50_RS12920 RNA polymerase sigma factor insig. 29 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2751 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 27 98
  Pseudomonas sp. BP01 JOY50_RS02475 sigma-70 family RNA polymerase sigma factor no data 35 72
  Pseudomonas sp. SVBP6 COO64_RS25100 sigma-70 family RNA polymerase sigma factor insig. 32 78
  Pseudomonas stutzeri RCH2 Psest_4339 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog strong 31 81
  Ralstonia solanacearum PSI07 RPSI07_RS01670 RNA polymerase sigma factor insig. 29 68
  Bacteroides ovatus ATCC 8483 BACOVA_03283 RNA polymerase sigma-70 factor insig. 26 80
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_133 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis insig. 28 77
  Pseudomonas fluorescens FW300-N2C3 AO356_16910 RNA polymerase subunit sigma insig. 24 89
  Rhodopseudomonas palustris CGA009 TX73_006920 RNA polymerase sigma factor insig. 29 79
  Pseudomonas simiae WCS417 PS417_11245 RNA polymerase subunit sigma-24 insig. 29 90
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 28 68
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14155 RNA polymerase sigma-70 factor insig. 27 80
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05735 RNA polymerase sigma-70 factor insig. 26 85
  Pseudomonas syringae pv. syringae B728a Psyr_2580 Sigma-70 region 2 no data 26 92
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2580 Sigma-70 region 2 insig. 26 92
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09540 sigma-70 family RNA polymerase sigma factor no data 25 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1008 FIG006045: Sigma factor, ECF subfamily insig. 25 73
  Methylophilus sp. DMC18 GFF1078 hypothetical protein insig. 24 68
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5307 FIG006045: Sigma factor, ECF subfamily strong 23 89
  Variovorax sp. SCN45 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 28 91