Homologs of GFF1334 from Sphingobium sp. HT1-2

Recombinase
SEED: Resolvase/integrase Bin

188 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF1334 Recombinase cofit 100 100
o Rhizobium sp. OAE497 ABIE40_RS04405 recombinase family protein insig. 63 99
  Ralstonia solanacearum UW163 UW163_RS01540 recombinase family protein insig. 38 91
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_24180 resolvase cofit 35 94
  Erwinia tracheiphila SCR3 LU632_RS07385 recombinase family protein insig. 35 94
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS22940 recombinase family protein cofit 34 95
  Pseudomonas aeruginosa PA14 IKLFDK_19370 Site-specific DNA recombinase SpoIVCA/DNA invertase PinE sig. 34 90
  Escherichia coli BL21 ECD_01345 Rac prophage; putative site-specific recombinase no data 35 93
  Escherichia coli ECOR27 NOLOHH_18610 pinR Serine recombinase PinR cofit 35 93
  Escherichia coli BL21 ECD_01504 Qin prophage; putative site-specific recombinase no data 35 93
  Escherichia coli BW25113 b1374 pinR Rac prophage; predicted site-specific recombinase (NCBI) no data 35 93
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02167 Tn3 family transposase ISYps3 cofit 35 93
  Escherichia coli BW25113 b1545 pinQ Qin prophage; predicted site-specific recombinase (NCBI) insig. 35 93
  Shewanella sp. ANA-3 Shewana3_4319 resolvase domain-containing protein (RefSeq) insig. 34 90
  Klebsiella pneumoniae MKP103 KDGMDA_00315 Transposon Tn21 resolvase insig. 34 90
  Erwinia amylovora T8 OLJFJH_00050 resolvase no data 35 93
  Erwinia amylovora T8 OLJFJH_00195 resolvase no data 35 93
  Sphingobium sp. HT1-2 GFF3388 Mobile element protein cofit 34 90
  Alteromonas macleodii MIT1002 MIT1002_02482 DNA-invertase hin insig. 33 93
  Ralstonia solanacearum PSI07 RPSI07_RS15555 recombinase family protein insig. 35 92
  Azospirillum sp. SherDot2 MPMX19_01561 DNA-invertase hin insig. 36 91
  Azospirillum sp. SherDot2 MPMX19_01313 DNA-invertase hin insig. 37 91
  Azospirillum sp. SherDot2 MPMX19_06438 DNA-invertase hin insig. 33 91
  Acinetobacter radioresistens SK82 MPMX26_03181 DNA-invertase hin insig. 30 89
  Acinetobacter radioresistens SK82 MPMX26_03126 DNA-invertase hin insig. 29 89
  Rhodospirillum rubrum S1H Rru_B0010 Resolvase (NCBI) insig. 34 90
  Pseudomonas segetis P6 ACVTMO_RS14675 recombinase family protein insig. 31 92
  Dinoroseobacter shibae DFL-12 Dshi_3680 Resolvase domain (RefSeq) no data 34 94
  Dinoroseobacter shibae DFL-12 Dshi_3876 Resolvase domain (RefSeq) no data 34 94
  Dinoroseobacter shibae DFL-12 Dshi_4081 Resolvase domain (RefSeq) no data 34 94
  Dechlorosoma suillum PS Dsui_0771 site-specific recombinase, DNA invertase Pin insig. 32 91
  Pseudomonas stutzeri RCH2 Psest_3156 Site-specific recombinases, DNA invertase Pin homologs insig. 30 93
  Escherichia coli ECOR38 HEPCGN_26710 spoIVCA DNA-invertase insig. 34 90
  Escherichia coli ECRC101 MCAODC_20820 spoIVCA DNA-invertase insig. 33 95
  Escherichia fergusonii Becca EFB2_03222 DNA-invertase hin insig. 34 90
  Klebsiella pneumoniae MRSN742743 KFA93_RS23845 recombinase family protein no data 35 90
  Escherichia coli ECRC100 OKFHMN_11730 spoIVCA resolvase insig. 36 91
  Escherichia coli ECRC101 MCAODC_02245 spoIVCA resolvase insig. 36 91
  Escherichia coli ECRC102 NIAGMN_09580 spoIVCA resolvase insig. 36 91
  Escherichia coli ECRC99 KEDOAH_16415 spoIVCA resolvase no data 36 91
  Variovorax sp. SCN45 GFF7081 Mobile element protein no data 34 90
  Klebsiella michiganensis M5al BWI76_RS12375 DNA-invertase hin sig. 35 90
  Escherichia coli ECOR38 HEPCGN_04245 DNA-invertase insig. 34 90
  Erwinia tracheiphila SCR3 LU632_RS04400 recombinase family protein insig. 32 90
  Enterobacter sp. TBS_079 MPMX20_04745 Transposon Tn3 resolvase insig. 34 89
  Azospirillum sp. SherDot2 MPMX19_05448 DNA-invertase hin insig. 33 92
  Escherichia coli ECRC100 OKFHMN_09410 pinE site-specific DNA recombinase cofit 34 81
  Escherichia coli ECRC98 JDDGAC_13045 pinE site-specific DNA recombinase insig. 34 81
  Escherichia coli ECRC98 JDDGAC_09160 spoIVCA DNA-invertase strong 33 95
  Escherichia coli Nissle 1917 ECOLIN_RS26325 recombinase family protein insig. 34 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12085 recombinase family protein insig. 34 93
  Escherichia coli BW25113 b1158 pin e14 prophage; site-specific DNA recombinase (NCBI) sig. 32 94
  Escherichia coli ECRC101 MCAODC_00110 pinE site-specific DNA recombinase insig. 33 94
  Escherichia coli ECRC102 NIAGMN_07460 pinE site-specific DNA recombinase insig. 33 94
  Shewanella oneidensis MR-1 SOA0019 ISSod9, DNA-invertase (NCBI ptt file) no data 32 90
  Shewanella oneidensis MR-1 SOA0170 ISSod9, DNA-invertase (NCBI ptt file) no data 32 90
  Dinoroseobacter shibae DFL-12 Dshi_3683 Resolvase domain (RefSeq) insig. 34 94
  Magnetospirillum magneticum AMB-1 AMB_RS10415 recombinase family protein insig. 33 89
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1543 DNA-invertase insig. 31 92
  Pseudomonas syringae pv. syringae B728a Psyr_2668 Helix-turn-helix, Fis-type insig. 34 90
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2668 Helix-turn-helix, Fis-type insig. 34 90
  Rhodopseudomonas palustris CGA009 TX73_023600 recombinase family protein insig. 35 92
  Escherichia coli ECOR38 HEPCGN_24370 DNA invertase insig. 32 90
  Azospirillum sp. SherDot2 MPMX19_06460 DNA-invertase hin insig. 33 91
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS23515 recombinase family protein cofit 33 90
  Magnetospirillum magneticum AMB-1 AMB_RS16510 recombinase family protein cofit 32 92
  Sphingobium sp. HT1-2 GFF5317 hypothetical protein cofit 32 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3230.1 Phage DNA invertase insig. 34 91
  Erwinia tracheiphila SCR3 LU632_RS10615 recombinase family protein insig. 31 90
  Shewanella loihica PV-4 Shew_3862 resolvase domain-containing protein (RefSeq) insig. 32 91
  Sphingobium sp. HT1-2 GFF3226 Serine recombinase, PinQ/PinR-type cofit 33 90
  Shewanella loihica PV-4 Shew_0991 resolvase domain-containing protein (RefSeq) no data 33 94
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS22225 recombinase family protein insig. 29 93
  Enterobacter asburiae PDN3 EX28DRAFT_3112 Site-specific recombinases, DNA invertase Pin homologs insig. 30 90
  Dinoroseobacter shibae DFL-12 Dshi_4084 Resolvase domain (RefSeq) insig. 31 94
  Enterobacter sp. TBS_079 MPMX20_04027 Serine recombinase PinR insig. 33 91
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04373 Transposon Tn3 resolvase insig. 28 94
  Klebsiella pneumoniae MKP103 KDGMDA_00030 Transposon Tn1331 resolvase no data 28 94
  Klebsiella pneumoniae MKP103 KDGMDA_02085 Transposon Tn1331 resolvase no data 28 94
  Escherichia fergusonii Becca EFB2_03773 DNA-invertase hin insig. 35 94
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS16275 recombinase family protein insig. 33 95
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_19155 DNA-invertase no data 32 92
  Escherichia coli ECRC100 OKFHMN_22480 spoIVCA serine recombinase cofit 30 94
  Escherichia coli ECRC101 MCAODC_13010 spoIVCA serine recombinase insig. 30 94
  Escherichia coli ECRC102 NIAGMN_20255 spoIVCA serine recombinase insig. 30 94
  Escherichia coli ECRC98 JDDGAC_26440 spoIVCA serine recombinase insig. 30 94
  Escherichia coli ECRC99 KEDOAH_05730 spoIVCA serine recombinase no data 30 94
  Klebsiella pneumoniae MKP103 KDGMDA_19850 DNA-invertase sig. 35 72
  Escherichia coli ECOR27 NOLOHH_15375 recombinase family protein sig. 32 91
  Methylophilus sp. DMC18 GFF745 Tn3 family transposase ISYps3 insig. 31 92
  Klebsiella pneumoniae MRSN742743 KFA93_RS25820 recombinase family protein no data 30 90
  Dickeya dianthicola ME23 DZA65_RS03530 recombinase family protein insig. 32 91
  Azospirillum brasilense Sp245 AZOBR_RS32770 invertase no data 31 91
  Sphingobium sp. HT1-2 GFF5292 Phage DNA invertase cofit 30 90
  Methanococcus maripaludis S2 MMP_RS03990 recombinase family protein insig. 28 90
  Methanococcus maripaludis JJ MMJJ_RS02615 recombinase family protein no data 29 90
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1246 RlgA insig. 35 66
  Azospirillum brasilense Sp245 AZOBR_RS20835 DNA resolvase no data 34 92
  Dechlorosoma suillum PS Dsui_2500 site-specific recombinase, DNA invertase Pin cofit 34 94
  Variovorax sp. SCN45 GFF7128 Mobile element protein no data 32 70
  Pseudomonas segetis P6 ACVTMO_RS13675 recombinase family protein insig. 30 92
  Vibrio cholerae E7946 ATCC 55056 CSW01_18145 resolvase cofit 29 100
  Sphingobium sp. HT1-2 GFF5326 Phage integrase, site-specific serine recombinase cofit 31 90
  Pseudomonas putida KT2440 PP_5490 site-specific DNA recombinase insig. 31 91
  Sphingobium sp. HT1-2 GFF845 RlgA cofit 29 91
  Magnetospirillum magneticum AMB-1 AMB_RS16710 recombinase family protein insig. 29 89
  Pseudomonas sp. SVBP6 COO64_RS22175 recombinase family protein insig. 33 91
  Escherichia coli ECRC98 JDDGAC_05745 spoIVCA Hin recombinase insig. 32 90
  Shewanella sp. ANA-3 Shewana3_2637 resolvase domain-containing protein (RefSeq) insig. 31 94
  Sinorhizobium meliloti 1021 SMc02287 DNA-invertase insig. 30 90
  Erwinia tracheiphila SCR3 LU632_RS24590 recombinase family protein insig. 27 89
  Pseudomonas orientalis W4I3 QF045_RS23030 recombinase family protein insig. 32 92
  Sphingobium sp. HT1-2 GFF1176 Serine recombinase, PinQ/PinR-type cofit 31 96
  Kangiella aquimarina DSM 16071 B158DRAFT_0960 Site-specific recombinases, DNA invertase Pin homologs insig. 29 91
  Erwinia tracheiphila SCR3 LU632_RS26065 recombinase family protein insig. 28 92
  Azospirillum brasilense Sp245 AZOBR_RS27370 resolvase no data 33 80
  Azospirillum sp. SherDot2 MPMX19_06437 DNA-invertase hin insig. 31 95
  Agrobacterium fabrum C58 Atu6046 DNA invertase insig. 32 87
  Erwinia tracheiphila SCR3 LU632_RS25210 recombinase family protein insig. 28 90
  Paraburkholderia graminis OAS925 ABIE53_000503 DNA invertase Pin-like site-specific DNA recombinase sig. 34 75
  Pseudomonas stutzeri RCH2 Psest_4383 Site-specific recombinases, DNA invertase Pin homologs sig. 31 91
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_15845 resolvase cofit 27 89
  Magnetospirillum magneticum AMB-1 AMB_RS15985 recombinase family protein cofit 28 79
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15975 master DNA invertase Mpi family serine-type recombinase insig. 27 89
  Dinoroseobacter shibae DFL-12 Dshi_4105 Resolvase domain (RefSeq) insig. 31 84
  Synechocystis sp000284455 PCC 6803 SGL_RS01270 recombinase family protein insig. 29 92
  Paraburkholderia sabiae LMG 24235 QEN71_RS33400 helix-turn-helix domain-containing protein no data 29 93
  Dinoroseobacter shibae DFL-12 Dshi_3853 Resolvase domain (RefSeq) insig. 33 73
  Escherichia coli ECOR27 NOLOHH_00080 Resolvase/invertase-type recombinase catalytic domain-containing protein insig. 31 90
  Cupriavidus basilensis FW507-4G11 RR42_RS00040 recombinase insig. 31 91
  Fusobacterium nucleatum SB010 HUW76_10835 recombinase family protein cofit 29 95
  Pseudomonas sp. DMC3 GFF4127 Putative transposon Tn552 DNA-invertase bin3 insig. 27 90
  Dinoroseobacter shibae DFL-12 Dshi_4026 Resolvase domain (RefSeq) insig. 31 84
  Pseudomonas fluorescens FW300-N2E3 AO353_02920 serine recombinase insig. 28 90
  Escherichia coli ECRC62 BNILDI_21055 DNA-invertase cofit 27 89
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_15700 Resolvase no data 28 90
  Escherichia coli ECOR38 HEPCGN_26960 Putative DNA-invertase insig. 36 46
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_20800 DNA invertase RlgA no data 32 61
  Synechocystis sp000284455 PCC 6803 SGL_RS00860 recombinase family protein insig. 30 90
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07920 recombinase family protein sig. 27 92
  Klebsiella pneumoniae MKP103 KDGMDA_01735 serine recombinase insig. 26 92
  Azospirillum sp. SherDot2 MPMX19_06678 hypothetical protein no data 33 73
  Variovorax sp. OAS795 ABID97_RS17765 recombinase family protein insig. 29 90
  Klebsiella pneumoniae MRSN742743 KFA93_RS25410 recombinase family protein no data 27 91
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS22920 recombinase family protein cofit 26 89
  Sphingobium sp. HT1-2 GFF5286 hypothetical protein cofit 29 92
  Paraburkholderia graminis OAS925 ABIE53_000504 DNA invertase Pin-like site-specific DNA recombinase sig. 42 43
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10435 hypothetical protein insig. 29 74
  Shewanella oneidensis MR-1 SOA0086 site-specific recombinase, resolvase family (NCBI ptt file) insig. 28 92
  Erwinia tracheiphila SCR3 LU632_RS17430 recombinase family protein insig. 27 91
  Erwinia tracheiphila SCR3 LU632_RS07360 recombinase family protein insig. 26 92
  Azospirillum brasilense Sp245 AZOBR_RS32940 DNA invertase no data 31 73
  Agrobacterium fabrum C58 Atu3849 resolvase insig. 29 90
  Dickeya dianthicola 67-19 HGI48_RS15525 recombinase family protein insig. 31 90
  Bacteroides stercoris CC31F HMPREF1181_RS10855 master DNA invertase Mpi family serine-type recombinase insig. 26 92
  Erwinia tracheiphila SCR3 LU632_RS12190 recombinase family protein insig. 27 91
  Erwinia amylovora T8 OLJFJH_02700 recombinase family protein insig. 26 91
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_25760 Recombinase family protein cofit 26 89
  Erwinia tracheiphila SCR3 LU632_RS10670 recombinase family protein sig. 26 89
  Alteromonas macleodii MIT1002 MIT1002_04146 Putative transposon Tn552 DNA-invertase bin3 insig. 26 90
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_24035 spoIVCA resolvase cofit 27 91
  Dinoroseobacter shibae DFL-12 Dshi_3748 Resolvase domain (RefSeq) insig. 32 73
  Rahnella sp. WP5 EX31_RS16410 recombinase family protein insig. 28 90
  Dickeya dadantii 3937 DDA3937_RS12095 recombinase family protein insig. 32 90
  Sphingobium sp. HT1-2 GFF5199 hypothetical protein cofit 30 92
  Azospirillum brasilense Sp245 AZOBR_RS30300 resolvase insig. 32 80
  Sphingobium sp. HT1-2 GFF5191 Resolvase/Integrase TinR protein insig. 33 94
  Dickeya dianthicola ME23 DZA65_RS16340 recombinase family protein insig. 31 90
  Dechlorosoma suillum PS Dsui_2526 site-specific recombinase, DNA invertase Pin insig. 28 89
  Fusobacterium nucleatum SB010 HUW76_02900 recombinase family protein cofit 21 90
  Pseudomonas stutzeri RCH2 Psest_4043 Site-specific recombinases, DNA invertase Pin homologs insig. 30 91
  Pseudomonas segetis P6 ACVTMO_RS00950 recombinase family protein insig. 29 68
  Pseudomonas stutzeri RCH2 Psest_4396 Site-specific recombinases, DNA invertase Pin homologs strong 26 90
  Dickeya dianthicola 67-19 HGI48_RS12185 recombinase family protein insig. 31 90
  Sphingobium sp. HT1-2 GFF4321 Phage integrase, site-specific serine recombinase cofit 28 90
  Dechlorosoma suillum PS Dsui_2492 site-specific recombinase, DNA invertase Pin insig. 28 89
  Shewanella oneidensis MR-1 SOA0077 site-specific recombinase, resolvase family (NCBI ptt file) insig. 28 91
  Azospirillum sp. SherDot2 MPMX19_06322 hypothetical protein insig. 36 48
  Dickeya dianthicola ME23 DZA65_RS12635 recombinase family protein insig. 31 90
  Sphingobium sp. HT1-2 GFF4499 hypothetical protein cofit 30 92
  Escherichia coli BL21 ECD_00849 putative DNA-invertase insig. 43 34
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_24935 recombinase family protein insig. 25 79
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_04810 recombinase family protein no data 28 89
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_09975 recombinase family protein no data 28 89
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11160 master DNA invertase Mpi family serine-type recombinase insig. 36 44
  Phocaeicola dorei CL03T12C01 ABI39_RS05885 master DNA invertase Mpi family serine-type recombinase insig. 36 44
  Rhodospirillum rubrum S1H Rru_B0022 Resolvase-like (NCBI) insig. 33 65
  Erwinia tracheiphila SCR3 LU632_RS12025 recombinase family protein insig. 25 79