Homologs of PS417_06660 from Pseudomonas simiae WCS417

endoribonuclease
SEED: RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein

85 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_06660 endoribonuclease insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS06690 RidA family protein insig. 94 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06690 RidA family protein insig. 94 100
o Cupriavidus basilensis FW507-4G11 RR42_RS26810 endoribonuclease insig. 56 100
o Magnetospirillum magneticum AMB-1 AMB_RS13835 RidA family protein insig. 53 99
o Rhizobium sp. OAE497 ABIE40_RS08890 RidA family protein insig. 49 99
o Rhodospirillum rubrum S1H Rru_A2457 Endoribonuclease L-PSP (NCBI) no data 51 97
o Bosea sp. OAE506 ABIE41_RS18195 RidA family protein insig. 48 97
o Agrobacterium fabrum C58 Atu1372 hypothetical protein strong 49 99
o Sinorhizobium meliloti 1021 SMc02103 hypothetical protein insig. 47 99
o Rhodopseudomonas palustris CGA009 TX73_016220 RidA family protein sig. 51 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08380 RidA family protein strong 44 97
o Dinoroseobacter shibae DFL-12 Dshi_0137 Endoribonuclease L-PSP (RefSeq) strong 46 100
o Xanthobacter sp. DMC5 GFF387 hypothetical protein sig. 46 99
o Azospirillum brasilense Sp245 AZOBR_RS05145 endoribonuclease sig. 45 99
o Azospirillum sp. SherDot2 MPMX19_00535 hypothetical protein insig. 45 99
o Caulobacter crescentus NA1000 CCNA_02241 endoribonuclease L-PSP strong 45 97
o Caulobacter crescentus NA1000 Δfur CCNA_02241 endoribonuclease L-PSP insig. 45 97
o Phaeobacter inhibens DSM 17395 PGA1_c29320 putative endoribonuclease L-PSP sig. 44 96
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1690 Putative translation initiation inhibitor, yjgF family no data 45 97
o Acidovorax sp. GW101-3H11 Ac3H11_268 Bona fide RidA/YjgF/TdcF/RutC subgroup sig. 42 97
o Ralstonia solanacearum GMI1000 RS_RS04880 RidA family protein no data 41 98
o Sphingobium sp. HT1-2 GFF3346 RidA/YER057c/UK114 superfamily, group 1 cofit 50 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS24665 RidA family protein insig. 40 97
o Pseudomonas sp. SVBP6 COO64_RS23680 RidA family protein insig. 43 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01472 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 42 97
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2685 Putative translation initiation inhibitor, yjgF family strong 47 99
o Burkholderia phytofirmans PsJN BPHYT_RS05960 endoribonuclease L-PSP strong 39 97
o Ralstonia solanacearum PSI07 RPSI07_RS19360 RidA family protein no data 41 98
o Herbaspirillum seropedicae SmR1 HSERO_RS09045 translation initiation inhibitor protein no data 37 97
  Agrobacterium fabrum C58 Atu3265 hypothetical protein insig. 40 96
o Paraburkholderia graminis OAS925 ABIE53_001398 enamine deaminase RidA (YjgF/YER057c/UK114 family) strong 39 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00270 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family strong 38 97
  Pseudomonas fluorescens FW300-N2E3 AO353_14625 hypothetical protein insig. 44 85
  Cupriavidus basilensis FW507-4G11 RR42_RS14585 L-PSP family endoribonuclease sig. 41 97
o Cellulophaga baltica 18 M666_RS04690 RidA family protein insig. 40 95
  Burkholderia phytofirmans PsJN BPHYT_RS13395 endoribonuclease L-PSP insig. 40 92
  Burkholderia phytofirmans PsJN BPHYT_RS10460 endoribonuclease no data 41 94
o Ralstonia sp. UNC404CL21Col ABZR87_RS09820 RidA family protein insig. 40 98
o Pseudomonas sp. BP01 JOY50_RS05210 RidA family protein no data 41 97
  Mycobacterium tuberculosis H37Rv Rv3678c Conserved protein no data 41 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14100 RidA family protein no data 40 98
o Ralstonia solanacearum UW163 UW163_RS15710 RidA family protein insig. 40 98
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10595 NAD(P)H:quinone oxidoreductase, type IV insig. 38 96
  Pseudomonas sp. DMC3 GFF4390 hypothetical protein insig. 39 85
  Ralstonia sp. UNC404CL21Col ABZR87_RS08380 RidA family protein insig. 38 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4927 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein insig. 39 85
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5556 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 38 97
  Rhizobium sp. OAE497 ABIE40_RS26075 RidA family protein insig. 41 99
  Variovorax sp. SCN45 GFF2690 RidA/YER057c/UK114 superfamily, group 1 no data 40 97
  Variovorax sp. OAS795 ABID97_RS20010 RidA family protein no data 40 97
  Pseudomonas simiae WCS417 PS417_14845 endoribonuclease L-PSP insig. 46 81
  Pseudomonas fluorescens SBW25 PFLU_RS16860 RidA family protein insig. 45 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16860 RidA family protein strong 45 81
  Bosea sp. OAE506 ABIE41_RS21995 RidA family protein insig. 36 98
  Variovorax sp. SCN45 GFF195 RidA/YER057c/UK114 superfamily, group 1 insig. 42 80
  Burkholderia phytofirmans PsJN BPHYT_RS35560 endoribonuclease L-PSP insig. 41 96
  Acidovorax sp. GW101-3H11 Ac3H11_3793 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 38 96
  Pseudomonas sp. BP01 JOY50_RS05535 RidA family protein no data 35 97
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2090 Putative translation initiation inhibitor, yjgF family insig. 34 97
  Pseudomonas aeruginosa PA14 IKLFDK_03535 RidA family protein insig. 41 77
  Pseudomonas aeruginosa MRSN321 DY961_RS08425 RidA family protein insig. 41 77
  Pseudomonas aeruginosa PUPa3 DQ20_RS44425 RidA family protein insig. 41 77
  Variovorax sp. SCN45 GFF116 RidA/YER057c/UK114 superfamily, group 1 insig. 43 96
  Variovorax sp. SCN45 GFF3327 RidA/YER057c/UK114 superfamily, group 1 insig. 37 96
  Shewanella oneidensis MR-1 SO1960 conserved hypothetical protein (NCBI ptt file) insig. 36 85
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3623 Endoribonuclease L-PSP insig. 34 98
  Variovorax sp. SCN45 GFF4151 RidA/YER057c/UK114 superfamily, group 1 insig. 34 97
  Variovorax sp. OAS795 ABID97_RS02865 RidA family protein insig. 40 74
  Variovorax sp. OAS795 ABID97_RS01340 RidA family protein insig. 28 83
  Desulfovibrio vulgaris Hildenborough JW710 DVU2647 endoribonuclease, L-PSP family (TIGR) sig. 32 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS41190 RidA family protein no data 30 91
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1205.1 hypothetical protein cofit 31 85
  Pseudomonas fluorescens SBW25 PFLU_RS29515 RidA family protein strong 27 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29515 RidA family protein strong 27 83
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00035 2-iminobutanoate/2-iminopropanoate deaminase strong 27 83
  Pseudomonas orientalis W4I3 QF045_RS02190 RidA family protein strong 27 83
  Pseudomonas simiae WCS417 PS417_27835 endoribonuclease strong 27 83
  Pseudomonas sp. RS175 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase strong 27 83
  Pseudomonas stutzeri RCH2 Psest_3818 endoribonuclease L-PSP, putative strong 26 83
  Pseudomonas sp. BP01 JOY50_RS08980 RidA family protein cofit 27 83
  Marinobacter adhaerens HP15 HP15_306 YjgF-like protein strong 26 86
  Alteromonas macleodii MIT1002 MIT1002_00109 Putative reactive intermediate deaminase TdcF strong 27 85
  Pseudomonas putida KT2440 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase strong 27 83
  Shewanella loihica PV-4 Shew_3500 putative endoribonuclease L-PSP (RefSeq) strong 28 86