Homologs of EX31_RS24355 from Rahnella sp. WP5

multidrug efflux RND transporter permease subunit
SEED: RND efflux system, inner membrane transporter CmeB

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rahnella sp. WP5 EX31_RS24355 multidrug efflux RND transporter permease subunit insig. 100 100
o Enterobacter sp. TBS_079 MPMX20_01142 Efflux pump membrane transporter BepG insig. 61 100
o Enterobacter asburiae PDN3 EX28DRAFT_2418 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 61 100
o Klebsiella michiganensis M5al BWI76_RS07505 hydrophobe/amphiphile efflux-1 family RND transporter insig. 60 100
o Sinorhizobium meliloti 1021 SMa1662 Cation/multidrug efflux pump insig. 53 100
o Shewanella loihica PV-4 Shew_1164 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) insig. 50 100
o Marinobacter adhaerens HP15 HP15_933 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family insig. 49 99
o Rhodopseudomonas palustris CGA009 TX73_021205 multidrug efflux RND transporter permease subunit insig. 47 99
  Sinorhizobium meliloti 1021 SM_b21498 acriflavin resistance protein insig. 47 99
  Rhodopseudomonas palustris CGA009 TX73_000495 multidrug efflux RND transporter permease subunit insig. 47 99
  Shewanella loihica PV-4 Shew_3796 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) insig. 44 100
  Pseudomonas sp. S08-1 OH686_07370 RND efflux system, inner membrane transporter cofit 43 100
  Desulfovibrio vulgaris Hildenborough JW710 DVU0061 multidrug resistance protein, putative (TIGR) strong 42 99
  Dechlorosoma suillum PS Dsui_1871 hydrophobe/amphiphile efflux-1 (HAE1) family transporter strong 43 99
  Desulfovibrio vulgaris Miyazaki F DvMF_2163 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) strong 44 99
o Rhizobium sp. OAE497 ABIE40_RS23875 multidrug efflux RND transporter permease subunit insig. 43 100
  Desulfovibrio vulgaris Miyazaki F DvMF_0036 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) insig. 43 99
  Desulfovibrio vulgaris Hildenborough JW710 DVU3248 AcrB/AcrD/AcrF family protein (TIGR) insig. 43 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02440 multidrug efflux RND transporter permease subunit insig. 41 100
o Phocaeicola dorei CL03T12C01 ABI39_RS01690 multidrug efflux RND transporter permease subunit insig. 41 100
  Herbaspirillum seropedicae SmR1 HSERO_RS02410 acriflavine resistance protein B strong 43 99
  Pseudomonas syringae pv. syringae B728a Psyr_2865 Hydrophobe/amphiphile efflux-1 HAE1 insig. 43 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2865 Hydrophobe/amphiphile efflux-1 HAE1 insig. 43 99
  Burkholderia phytofirmans PsJN BPHYT_RS20640 multidrug efflux RND transporter permease subunit insig. 43 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS07690 multidrug efflux RND transporter permease subunit insig. 42 100
o Bacteroides thetaiotaomicron VPI-5482 BT0886 putative cation efflux pump (NCBI ptt file) sig. 42 99
  Pseudomonas fluorescens FW300-N2C3 AO356_00695 multidrug transporter insig. 43 99
  Sinorhizobium meliloti 1021 SMc03971 multidrug-efflux system transmembrane protein insig. 42 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01393 hydrophobic/amphiphilic exporter-1, HAE1 family insig. 43 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_222 RND efflux system, inner membrane transporter CmeB insig. 43 99
  Rhodopseudomonas palustris CGA009 TX73_015325 efflux RND transporter permease subunit insig. 42 99
  Pseudomonas syringae pv. syringae B728a Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 sig. 42 100
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 strong 42 100
  Pseudomonas fluorescens SBW25 PFLU_RS20135 multidrug efflux RND transporter permease subunit insig. 43 100
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20135 multidrug efflux RND transporter permease subunit insig. 43 100
  Herbaspirillum seropedicae SmR1 HSERO_RS23055 multidrug transporter insig. 42 100
o Bacteroides ovatus ATCC 8483 BACOVA_02607 RND transporter, HAE1 family cofit 42 99
  Pseudomonas simiae WCS417 PS417_18285 multidrug transporter insig. 43 99
  Klebsiella michiganensis M5al BWI76_RS06775 multidrug efflux RND transporter permease subunit strong 42 98
  Pseudomonas sp. S08-1 OH686_01005 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 42 100
o Bacteroides stercoris CC31F HMPREF1181_RS14290 efflux RND transporter permease subunit insig. 42 99
  Sinorhizobium meliloti 1021 SMc02867 multidrug-efflux system transmembrane protein strong 42 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05160 multidrug efflux RND transporter permease subunit insig. 42 100
  Magnetospirillum magneticum AMB-1 AMB_RS17325 multidrug efflux RND transporter permease subunit insig. 42 99
  Pseudomonas sp. S08-1 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 41 100
  Pseudomonas fluorescens FW300-N2C3 AO356_27605 transporter strong 41 100
  Escherichia coli BL21 ECD_00413 multidrug efflux system protein strong 42 98
  Escherichia fergusonii Becca EFB2_03596 Multidrug efflux pump subunit AcrB insig. 42 98
  Escherichia coli ECOR27 NOLOHH_01140 acrB efflux RND transporter permease AcrB cofit 42 98
  Escherichia coli ECOR38 HEPCGN_06820 acrB efflux RND transporter permease AcrB strong 42 98
  Escherichia coli ECRC62 BNILDI_22555 acrB efflux RND transporter permease AcrB cofit 42 98
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03212 Multidrug efflux pump subunit AcrB cofit 42 98
  Escherichia coli Nissle 1917 ECOLIN_RS02750 efflux RND transporter permease AcrB sig. 42 98
  Escherichia coli BW25113 b0462 acrB multidrug efflux system protein (NCBI) strong 42 98
  Escherichia coli ECRC100 OKFHMN_08205 acrB efflux RND transporter permease AcrB cofit 42 98
  Escherichia coli ECRC101 MCAODC_27430 acrB efflux RND transporter permease AcrB cofit 42 98
  Escherichia coli ECRC102 NIAGMN_06260 acrB efflux RND transporter permease AcrB insig. 42 98
  Escherichia coli ECRC99 KEDOAH_19760 acrB efflux RND transporter permease AcrB no data 42 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4246 RND efflux system, inner membrane transporter CmeB insig. 41 99
  Pseudomonas fluorescens SBW25 PFLU_RS14260 efflux RND transporter permease subunit insig. 41 100
  Pseudomonas fluorescens SBW25-INTG PFLU_RS14260 efflux RND transporter permease subunit insig. 41 100
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2116 RND efflux system, inner membrane transporter CmeB insig. 43 98
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00010 multidrug efflux RND transporter permease subunit insig. 42 99
  Phocaeicola dorei CL03T12C01 ABI39_RS18725 multidrug efflux RND transporter permease subunit insig. 42 100
  Rhizobium sp. OAE497 ABIE40_RS14935 efflux RND transporter permease subunit insig. 42 100
  Burkholderia phytofirmans PsJN BPHYT_RS29005 transporter insig. 43 100
  Enterobacter asburiae PDN3 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family cofit 42 98
  Paraburkholderia graminis OAS925 ABIE53_005788 multidrug efflux pump insig. 40 99
  Variovorax sp. SCN45 GFF429 RND efflux system, inner membrane transporter insig. 42 99
  Pseudomonas putida KT2440 PP_3426 Multidrug efflux RND transporter MexF sig. 41 100
  Enterobacter sp. TBS_079 MPMX20_01064 Multidrug efflux pump subunit AcrB strong 42 98
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08425 efflux RND transporter permease subunit insig. 39 100
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4379 RND efflux system, inner membrane transporter CmeB sig. 42 98
  Pseudomonas stutzeri RCH2 Psest_2144 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family sig. 42 100
  Pseudomonas simiae WCS417 PS417_13190 transporter insig. 40 100
  Enterobacter asburiae PDN3 EX28DRAFT_0191 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 40 99
  Agrobacterium fabrum C58 Atu3202 RND multidrug efflux transporter strong 42 98
  Azospirillum brasilense Sp245 AZOBR_RS30185 multidrug transporter insig. 41 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS02525 efflux RND transporter permease subunit strong 41 99
  Serratia liquefaciens MT49 IAI46_13385 efflux RND transporter permease subunit insig. 42 100
  Pseudomonas simiae WCS417 PS417_06770 multidrug transporter strong 41 100
  Escherichia fergusonii Becca EFB2_01418 Multidrug efflux pump subunit AcrB insig. 41 99
  Escherichia coli ECRC62 BNILDI_12460 acrD multidrug efflux RND transporter permease AcrD insig. 41 99
  Castellaniella sp019104865 MT123 ABCV34_RS04225 efflux RND transporter permease subunit strong 41 99
  Escherichia coli BL21 ECD_02361 aminoglycoside/multidrug efflux system insig. 41 99
  Escherichia coli ECOR27 NOLOHH_13650 acrD multidrug efflux RND transporter permease AcrD cofit 41 99
  Escherichia coli ECOR38 HEPCGN_21140 acrD multidrug efflux RND transporter permease AcrD insig. 41 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01261 Multidrug efflux pump subunit AcrB insig. 41 99
  Escherichia coli BW25113 b2470 acrD aminoglycoside/multidrug efflux system (NCBI) strong 41 99
  Escherichia coli Nissle 1917 ECOLIN_RS14090 multidrug efflux RND transporter permease AcrD insig. 41 99
  Shewanella sp. ANA-3 Shewana3_1993 acriflavin resistance protein (RefSeq) cofit 42 100
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03655 multidrug efflux RND transporter permease subunit strong 42 99
  Klebsiella michiganensis M5al BWI76_RS25585 multidrug efflux RND transporter permease subunit insig. 42 98
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4772 RND efflux system, inner membrane transporter CmeB strong 42 98
  Pseudomonas fluorescens FW300-N2E3 AO353_26845 acriflavine resistance protein B strong 42 98
  Pseudomonas stutzeri RCH2 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 41 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3060 Multidrug efflux transporter MexF insig. 41 100
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4864 Multidrug efflux transporter MexF insig. 41 100
  Escherichia coli ECRC100 OKFHMN_21970 acrD multidrug efflux RND transporter permease AcrD cofit 41 99
  Escherichia coli ECRC101 MCAODC_12500 acrD multidrug efflux RND transporter permease AcrD insig. 41 99