Homologs of DDA3937_RS03405 from Dickeya dadantii 3937

helix-turn-helix transcriptional regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dickeya dadantii 3937 DDA3937_RS03405 helix-turn-helix transcriptional regulator insig. 100 100
o Dickeya dianthicola 67-19 HGI48_RS03475 winged helix-turn-helix transcriptional regulator insig. 94 100
o Dickeya dianthicola ME23 DZA65_RS03585 helix-turn-helix transcriptional regulator insig. 94 100
o Agrobacterium fabrum C58 Atu0948 hypothetical protein insig. 65 94
o Pectobacterium carotovorum WPP14 HER17_RS03945 helix-turn-helix transcriptional regulator insig. 60 90
  Azospirillum sp. SherDot2 MPMX19_01622 hypothetical protein insig. 57 90
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08140 helix-turn-helix domain-containing protein insig. 52 93
  Rhodospirillum rubrum S1H Rru_A2523 Predicted transcriptional regulator (NCBI) insig. 50 94
  Dickeya dadantii 3937 DDA3937_RS08960 helix-turn-helix transcriptional regulator insig. 57 80
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0359 transcriptional regulator, HxlR family insig. 54 90
  Rhizobium sp. OAE497 ABIE40_RS11410 helix-turn-helix domain-containing protein insig. 47 85
  Pectobacterium carotovorum WPP14 HER17_RS21785 helix-turn-helix transcriptional regulator insig. 44 94
  Rhodopseudomonas palustris CGA009 TX73_014000 helix-turn-helix domain-containing protein insig. 46 85
  Serratia liquefaciens MT49 IAI46_19180 helix-turn-helix transcriptional regulator insig. 44 91
  Pseudomonas fluorescens FW300-N2C3 AO356_27405 MarR family transcriptional regulator insig. 42 90
  Pectobacterium carotovorum WPP14 HER17_RS13865 helix-turn-helix transcriptional regulator insig. 42 95
  Pseudomonas sp. RS175 PFR28_01735 hypothetical protein insig. 41 90
o Burkholderia phytofirmans PsJN BPHYT_RS22405 HxlR family transcriptional regulator no data 42 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_868 Transcriptional regulator, HxlR family insig. 41 90
  Dickeya dianthicola 67-19 HGI48_RS09920 helix-turn-helix transcriptional regulator insig. 40 86
  Dickeya dianthicola ME23 DZA65_RS10255 helix-turn-helix transcriptional regulator insig. 40 86
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS03700 helix-turn-helix domain-containing protein insig. 42 90
  Paraburkholderia graminis OAS925 ABIE53_005750 DNA-binding HxlR family transcriptional regulator sig. 42 90
  Dickeya dadantii 3937 DDA3937_RS21340 helix-turn-helix transcriptional regulator insig. 41 92
  Dickeya dadantii 3937 DDA3937_RS09915 winged helix-turn-helix transcriptional regulator insig. 40 86
  Agrobacterium fabrum C58 Atu2000 hypothetical protein insig. 43 92
  Bacteroides stercoris CC31F HMPREF1181_RS00710 helix-turn-helix transcriptional regulator cofit 45 86
  Herbaspirillum seropedicae SmR1 HSERO_RS02830 transcription regulator protein insig. 45 87
  Cupriavidus basilensis FW507-4G11 RR42_RS25400 MarR family transcriptional regulator insig. 41 90
o Paraburkholderia sabiae LMG 24235 QEN71_RS10925 helix-turn-helix domain-containing protein insig. 45 90
  Rahnella sp. WP5 EX31_RS07540 helix-turn-helix transcriptional regulator insig. 49 82
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS20580 transcriptional regulator insig. 42 83
  Ralstonia solanacearum UW163 UW163_RS18595 transcriptional regulator insig. 42 83
  Rhizobium sp. OAE497 ABIE40_RS28255 helix-turn-helix domain-containing protein insig. 45 82
  Agrobacterium fabrum C58 Atu5437 hypothetical protein insig. 43 83
  Paraburkholderia graminis OAS925 ABIE53_001118 DNA-binding HxlR family transcriptional regulator sig. 43 85
  Dechlorosoma suillum PS Dsui_2666 putative transcriptional regulator insig. 41 94
  Rhizobium sp. OAE497 ABIE40_RS29330 helix-turn-helix domain-containing protein cofit 47 83
  Azospirillum sp. SherDot2 MPMX19_06988 hypothetical protein insig. 44 82
  Caulobacter crescentus NA1000 CCNA_03479 MarR-family transcriptional regulator strong 43 84
  Caulobacter crescentus NA1000 Δfur CCNA_03479 MarR-family transcriptional regulator cofit 43 84
  Sinorhizobium meliloti 1021 SMc01493 hypothetical protein insig. 41 89
  Erwinia tracheiphila SCR3 LU632_RS04480 helix-turn-helix transcriptional regulator insig. 49 80
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00038 transcriptional regulator, HxlR family insig. 45 81
  Ralstonia solanacearum PSI07 RPSI07_RS09260 transcriptional regulator insig. 44 86
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.408.1 Redox-sensing transcriptional regulator QorR, putative insig. 42 90
  Rahnella sp. WP5 EX31_RS02235 helix-turn-helix transcriptional regulator insig. 45 83
  Escherichia coli BL21 ECD_04084 DUF24 family HxlR-type putative transcriptional regulator insig. 42 87
  Escherichia fergusonii Becca EFB2_04316 hypothetical protein insig. 42 87
  Escherichia coli ECOR27 NOLOHH_04310 ytfH Uncharacterized HTH-type transcriptional regulator YtfH insig. 42 87
  Escherichia coli ECRC101 OKFHMN_12050 ytfH Uncharacterized HTH-type transcriptional regulator YtfH insig. 42 87
  Escherichia coli ECRC101 MCAODC_02565 ytfH Uncharacterized HTH-type transcriptional regulator YtfH insig. 42 87
  Escherichia coli ECRC102 NIAGMN_09900 ytfH Uncharacterized HTH-type transcriptional regulator YtfH insig. 42 87
  Escherichia coli ECRC62 BNILDI_07210 ytfH Uncharacterized HTH-type transcriptional regulator YtfH insig. 42 87
  Escherichia coli ECRC99 KEDOAH_16105 ytfH Uncharacterized HTH-type transcriptional regulator YtfH no data 42 87
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03821 hypothetical protein insig. 42 87
  Escherichia coli BW25113 b4212 ytfH orf, hypothetical protein (VIMSS) insig. 42 87
  Dickeya dianthicola 67-19 HGI48_RS04010 helix-turn-helix transcriptional regulator insig. 45 81
  Burkholderia phytofirmans PsJN BPHYT_RS32965 HxlR family transcriptional regulator no data 42 82
  Escherichia coli ECRC98 JDDGAC_15690 hxlR transcriptional regulator no data 42 87
  Escherichia coli Nissle 1917 ECOLIN_RS24470 helix-turn-helix domain-containing protein insig. 41 87
  Ralstonia solanacearum GMI1000 RS_RS10720 transcriptional regulator no data 42 81
  Escherichia coli ECOR38 HEPCGN_10245 hxlR transcriptional regulator cofit 41 87
  Pseudomonas syringae pv. syringae B728a Psyr_2312 Protein of unknown function DUF24 insig. 37 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2312 Protein of unknown function DUF24 no data 37 93
  Bosea sp. OAE506 ABIE41_RS00345 helix-turn-helix domain-containing protein insig. 43 78
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF865 Redox-sensing transcriptional regulator QorR insig. 39 92
  Alteromonas macleodii MIT1002 MIT1002_02508 putative HTH-type transcriptional regulator YtcD insig. 45 78
  Pantoea sp. MT58 IAI47_03465 helix-turn-helix transcriptional regulator insig. 39 86
  Dickeya dadantii 3937 DDA3937_RS04740 helix-turn-helix transcriptional regulator insig. 43 79
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19660 transcriptional regulator no data 41 74
  Ralstonia solanacearum UW163 UW163_RS19515 transcriptional regulator insig. 41 74
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14215 helix-turn-helix domain-containing protein no data 41 83
  Klebsiella michiganensis M5al BWI76_RS02725 HxlR family transcriptional regulator strong 42 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4113 Redox-sensing transcriptional regulator QorR insig. 41 84
  Dickeya dianthicola 67-19 HGI48_RS04665 helix-turn-helix transcriptional regulator insig. 40 83
  Dickeya dianthicola ME23 DZA65_RS04605 helix-turn-helix transcriptional regulator insig. 40 83
  Pseudomonas sp. RS175 PFR28_04678 hypothetical protein insig. 41 84
  Pseudomonas fluorescens FW300-N2C3 AO356_11245 transcriptional regulator insig. 41 84
  Enterobacter sp. TBS_079 MPMX20_00490 hypothetical protein insig. 40 87
  Enterobacter asburiae PDN3 EX28DRAFT_3399 transcriptional regulator, HxlR family insig. 41 87
  Caulobacter crescentus NA1000 CCNA_01913 MarR-family transcriptional regulator strong 40 94
  Caulobacter crescentus NA1000 Δfur CCNA_01913 MarR-family transcriptional regulator insig. 40 94
  Bacteroides ovatus ATCC 8483 BACOVA_03842 transcriptional regulator, HxlR family insig. 43 82
  Pectobacterium carotovorum WPP14 HER17_RS17855 helix-turn-helix transcriptional regulator insig. 44 84
  Bacteroides thetaiotaomicron VPI-5482 BT1262 putative transcriptional regulator (NCBI ptt file) insig. 41 84
  Ralstonia solanacearum GMI1000 RS_RS21160 transcriptional regulator insig. 40 71
  Azospirillum brasilense Sp245 AZOBR_RS31330 HxlR family transcriptional regulator insig. 38 86
  Herbaspirillum seropedicae SmR1 HSERO_RS02875 transcriptional regulator strong 44 83
  Ralstonia solanacearum PSI07 RPSI07_RS03550 transcriptional regulator insig. 39 71
  Klebsiella michiganensis M5al BWI76_RS13050 transcriptional regulator sig. 32 92
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14800 helix-turn-helix transcriptional regulator insig. 42 79
  Bosea sp. OAE506 ABIE41_RS23565 helix-turn-helix domain-containing protein insig. 37 78
  Phocaeicola dorei CL03T12C01 ABI39_RS10515 helix-turn-helix transcriptional regulator insig. 42 79
  Bifidobacterium breve UCC2003 BBR_RS11295 transcriptional regulator insig. 41 74
  Ralstonia sp. UNC404CL21Col ABZR87_RS21495 helix-turn-helix domain-containing protein insig. 41 78
  Serratia liquefaciens MT49 IAI46_09870 helix-turn-helix transcriptional regulator no data 39 79
  Rhizobium sp. OAE497 ABIE40_RS05840 helix-turn-helix domain-containing protein insig. 39 77
  Agrobacterium fabrum C58 Atu0997 hypothetical protein strong 40 77
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0659 transcriptional regulator, HxlR family insig. 37 81