Homologs of CA265_RS06880 from Pedobacter sp. GW460-11-11-14-LB5

RND transporter
SEED: RND efflux system, outer membrane lipoprotein, NodT family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06880 RND transporter strong 100 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0540 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family cofit 69 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08720 RND transporter insig. 66 100
o Cellulophaga baltica 18 M666_RS00645 TolC family protein insig. 58 99
o Methylophilus sp. DMC18 GFF2275 Toluene efflux pump outer membrane protein TtgF strong 52 97
o Alteromonas macleodii MIT1002 MIT1002_00868 Toluene efflux pump outer membrane protein TtgF precursor insig. 48 96
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2780 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family strong 38 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05050 RND transporter sig. 35 100
o Phocaeicola dorei CL03T12C01 ABI39_RS18015 efflux transporter outer membrane subunit insig. 33 98
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12550 efflux transporter outer membrane subunit insig. 34 100
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS08420 efflux transporter outer membrane subunit insig. 34 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06010 efflux transporter outer membrane subunit sig. 33 98
  Cellulophaga baltica 18 M666_RS04030 efflux transporter outer membrane subunit insig. 33 99
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2471 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family cofit 31 99
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23005 hypothetical protein strong 33 90
  Phocaeicola dorei CL03T12C01 ABI39_RS01280 efflux transporter outer membrane subunit insig. 30 96
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02095 efflux transporter outer membrane subunit strong 30 96
  Bacteroides thetaiotaomicron VPI-5482 BT0306 outer membrane protein oprM precursor (NCBI ptt file) strong 29 99
  Bacteroides stercoris CC31F HMPREF1181_RS04570 efflux transporter outer membrane subunit sig. 30 100
  Bacteroides ovatus ATCC 8483 BACOVA_00423 efflux transporter, outer membrane factor lipoprotein, NodT family strong 28 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS09200 efflux transporter outer membrane subunit insig. 30 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS03460 efflux transporter outer membrane subunit insig. 29 90
  Bacteroides ovatus ATCC 8483 BACOVA_01390 efflux transporter, outer membrane factor lipoprotein, NodT family insig. 31 93
  Desulfovibrio vulgaris Miyazaki F DvMF_2162 RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) strong 30 90
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01355 efflux transporter outer membrane subunit cofit 31 90
  Burkholderia phytofirmans PsJN BPHYT_RS20645 RND transporter insig. 30 98
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00015 efflux transporter outer membrane subunit sig. 29 100
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01876 outer membrane protein, multidrug efflux system insig. 27 100
  Desulfovibrio vulgaris Hildenborough JW710 DVU0062 RND efflux system, outer membrane protein, NodT family (TIGR) strong 27 99
o Enterobacter sp. TBS_079 MPMX20_02191 Outer membrane protein OprM insig. 29 99
  Bacteroides thetaiotaomicron VPI-5482 BT2942 putative multidrug resistance protein (NCBI ptt file) sig. 30 91
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13665 TolC family protein insig. 28 100
  Bacteroides ovatus ATCC 8483 BACOVA_01993 efflux transporter, outer membrane factor lipoprotein, NodT family strong 30 97
  Paraburkholderia graminis OAS925 ABIE53_005789 multidrug efflux system outer membrane protein insig. 28 100
  Phocaeicola dorei CL03T12C01 ABI39_RS18730 efflux transporter outer membrane subunit insig. 27 96
  Bacteroides ovatus ATCC 8483 BACOVA_02875 efflux transporter, outer membrane factor lipoprotein, NodT family cofit 29 91
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05155 efflux transporter outer membrane subunit sig. 27 98
  Bacteroides thetaiotaomicron VPI-5482 BT3337 RND efflux system, outer membrane component BipA (from data) strong 31 91
  Phocaeicola dorei CL03T12C01 ABI39_RS08285 TolC family protein insig. 30 96
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00680 TolC family protein insig. 30 96
o Enterobacter asburiae PDN3 EX28DRAFT_1355 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family insig. 29 98
  Bacteroides stercoris CC31F HMPREF1181_RS02355 TolC family protein cofit 30 97
  Bacteroides thetaiotaomicron VPI-5482 BT1965 multidrug efflux pump channel protein (NCBI ptt file) insig. 30 93
  Lysobacter sp. OAE881 ABIE51_RS10130 efflux transporter outer membrane subunit insig. 28 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS02530 efflux transporter outer membrane subunit strong 28 92
  Serratia liquefaciens MT49 IAI46_16730 efflux transporter outer membrane subunit insig. 27 99
  Pantoea sp. MT58 IAI47_12395 efflux transporter outer membrane subunit insig. 27 99
  Pseudomonas segetis P6 MPMX49_00684 Outer membrane protein OprM insig. 29 91
o Ralstonia solanacearum GMI1000 RS_RS21025 adeC/adeK/oprM family multidrug efflux complex outer membrane factor insig. 29 90
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04945 efflux transporter outer membrane subunit cofit 27 99
  Pseudomonas aeruginosa PA14 IKLFDK_23285 multidrug efflux RND transporter outer membrane channel subunit OprM insig. 28 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04169 outer membrane protein, multidrug efflux system strong 27 90
o Shewanella sp. ANA-3 Shewana3_1994 outer membrane efflux protein (RefSeq) insig. 26 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS29860 efflux transporter outer membrane subunit insig. 27 91
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19800 adeC/adeK/oprM family multidrug efflux complex outer membrane factor insig. 29 90
  Ralstonia solanacearum UW163 UW163_RS19375 adeC/adeK/oprM family multidrug efflux complex outer membrane factor insig. 29 90
  Herbaspirillum seropedicae SmR1 HSERO_RS02405 multidrug transporter strong 27 98
o Variovorax sp. SCN45 GFF3820 Efflux transport system, outer membrane factor (OMF) lipoprotein insig. 27 98
  Dechlorosoma suillum PS Dsui_1870 efflux transporter, outer membrane factor lipoprotein, NodT family strong 27 89
  Klebsiella pneumoniae MKP103 KDGMDA_20785 transporter insig. 28 96
  Klebsiella michiganensis M5al BWI76_RS13175 NodT family RND efflux system outer membrane lipoprotein insig. 28 96
  Acinetobacter radioresistens SK82 MPMX26_00688 Outer membrane protein OprM strong 25 98
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1795.1 RND efflux system, outer membrane lipoprotein CmeC insig. 29 90
  Cupriavidus basilensis FW507-4G11 RR42_RS32425 multidrug transporter insig. 28 89
  Erwinia amylovora T8 OLJFJH_15745 transporter insig. 27 98
  Variovorax sp. SCN45 GFF3724 Efflux transport system, outer membrane factor (OMF) lipoprotein insig. 30 89
  Ralstonia solanacearum PSI07 RPSI07_RS03385 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor insig. 27 97
  Ralstonia solanacearum GMI1000 RS_RS00040 multidrug transporter strong 27 92
  Burkholderia phytofirmans PsJN BPHYT_RS16165 multidrug transporter no data 26 89
o Pseudomonas simiae WCS417 PS417_17645 RND transporter insig. 28 100
  Variovorax sp. SCN45 GFF4392 Efflux transport system, outer membrane factor (OMF) lipoprotein insig. 27 88
  Sphingobium sp. HT1-2 GFF2842 Efflux transport system, outer membrane factor (OMF) lipoprotein cofit 26 97
  Sphingobium sp. HT1-2 GFF3952 Efflux transport system, outer membrane factor (OMF) lipoprotein cofit 26 100
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4169 Outer membrane component of tripartite multidrug resistance system insig. 27 89
  Pseudomonas sp. RS175 PFR28_04798 putative efflux pump outer membrane protein TtgC insig. 26 97
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04165 efflux transporter outer membrane subunit cofit 28 89
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS19195 efflux transporter outer membrane subunit strong 27 90
o Erwinia tracheiphila SCR3 LU632_RS09495 efflux transporter outer membrane subunit insig. 27 97
  Ralstonia solanacearum PSI07 RPSI07_RS23910 multidrug transporter strong 27 88
  Cupriavidus basilensis FW507-4G11 RR42_RS36970 RND transporter insig. 26 89
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21910 RND transporter insig. 26 92
  Ralstonia solanacearum UW163 UW163_RS17275 RND transporter insig. 26 92
  Pseudomonas aeruginosa PA14 IKLFDK_11720 pyoverdine export/recycling transporter outer membrane subunit OmpQ insig. 29 89
o Pseudomonas fluorescens SBW25 PFLU_RS19435 efflux transporter outer membrane subunit insig. 27 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19435 efflux transporter outer membrane subunit sig. 27 91
  Acidovorax sp. GW101-3H11 Ac3H11_4447 RND efflux system, outer membrane lipoprotein CmeC strong 27 92
  Burkholderia phytofirmans PsJN BPHYT_RS25850 RND transporter no data 26 98
  Dechlorosoma suillum PS Dsui_3183 efflux transporter, outer membrane factor lipoprotein, NodT family no data 26 89
  Desulfovibrio vulgaris Hildenborough JW710 DVU2815 outer membrane efflux protein (TIGR) insig. 26 89
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1948 RND efflux system, outer membrane lipoprotein CmeC insig. 26 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS19885 efflux transporter outer membrane subunit insig. 25 97
  Variovorax sp. OAS795 ABID97_RS00330 efflux transporter outer membrane subunit cofit 28 89
  Rhodopseudomonas palustris CGA009 TX73_013300 efflux transporter outer membrane subunit cofit 27 89
  Methylophilus sp. DMC18 GFF2592 Outer membrane protein OprM insig. 26 90
o Acinetobacter baumannii LAC-4 RR41_RS03860 multidrug efflux RND transporter outer membrane channel subunit AdeK no data 25 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS05320 efflux transporter outer membrane subunit strong 26 88
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18290 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor insig. 28 92
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4245 RND efflux system, outer membrane lipoprotein CmeC insig. 27 92
  Escherichia fergusonii Becca EFB2_03522 Cation efflux system protein CusC insig. 26 97
  Pseudomonas fluorescens FW300-N2C3 AO356_00690 transporter insig. 26 95