| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Burkholderia phytofirmans PsJN | BPHYT_RS09355 | | LysR family transcriptional regulator | insig. | 100 | 100 |
| o | Paraburkholderia graminis OAS925 | ABIE53_005551 | | DNA-binding transcriptional LysR family regulator | sig. | 65 | 100 |
| o | Serratia liquefaciens MT49 | IAI46_12360 | | LysR family transcriptional regulator | insig. | 65 | 99 |
| o | Rahnella sp. WP5 | EX31_RS00345 | | LysR family transcriptional regulator | insig. | 62 | 99 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS02670 | | LysR family transcriptional regulator | insig. | 57 | 98 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_1163 | | Transcriptional regulator | insig. | 56 | 98 |
| o | Enterobacter sp. TBS_079 | MPMX20_02321 | | Nodulation protein D 2 | sig. | 55 | 98 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_04250 | | LysR family transcriptional regulator | insig. | 53 | 98 |
| o | Klebsiella michiganensis M5al | BWI76_RS11825 | | LysR family transcriptional regulator | insig. | 51 | 99 |
| o | Azospirillum sp. SherDot2 | MPMX19_05590 | | HTH-type transcriptional regulator SyrM 1 | insig. | 50 | 94 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1236 | | Transcriptional regulator, LysR family | insig. | 48 | 99 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_28485 | | LysR family transcriptional regulator | insig. | 48 | 98 |
| o | Sinorhizobium meliloti 1021 | SMc02893 | | transcriptional regulator | insig. | 48 | 98 |
| o | Dickeya dianthicola 67-19 | HGI48_RS07495 | | LysR family transcriptional regulator | insig. | 49 | 98 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS07360 | | LysR family transcriptional regulator | insig. | 51 | 99 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05952 | | transcriptional regulator, LysR family | insig. | 48 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_02125 | | Nodulation protein D 2 | sig. | 49 | 99 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4233 | | Transcriptional regulator, LysR family | no data | 50 | 98 |
| o | Xanthobacter sp. DMC5 | GFF4088 | | Nodulation protein D 2 | no data | 47 | 100 |
| o | Pseudomonas simiae WCS417 | PS417_12830 | | LysR family transcriptional regulator | insig. | 48 | 97 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS13510 | | LysR family transcriptional regulator | insig. | 48 | 98 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS13510 | | LysR family transcriptional regulator | insig. | 48 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_05428 | | PCP degradation transcriptional activation protein | insig. | 47 | 98 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_27040 | | LysR family transcriptional regulator | insig. | 46 | 99 |
| o | Rhizobium sp. OAE497 | ABIE40_RS23085 | | LysR substrate-binding domain-containing protein | insig. | 46 | 98 |
| o | Rhodospirillum rubrum S1H | Rru_B0017 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 45 | 97 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS17980 | | LysR family transcriptional regulator | insig. | 47 | 93 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02815 | | Nodulation protein D 2 | insig. | 43 | 98 |
| o | Pseudomonas sp. SVBP6 | COO64_RS11470 | | LysR family transcriptional regulator | strong | 42 | 98 |
| o | Pseudomonas sp. DMC3 | GFF4277 | | PCP degradation transcriptional activation protein | cofit | 42 | 98 |
| | Pseudomonas sp. SVBP6 | COO64_RS08915 | | LysR family transcriptional regulator | insig. | 41 | 97 |
| | Pseudomonas simiae WCS417 | PS417_00650 | | LysR family transcriptional regulator | insig. | 40 | 98 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00336 | | Nodulation protein D 2 | cofit | 40 | 98 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_11220 | | LysR family transcriptional regulator | insig. | 42 | 98 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1675 | | Transcriptional regulator | insig. | 41 | 98 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS00660 | | LysR family transcriptional regulator | insig. | 40 | 98 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS00660 | | LysR family transcriptional regulator | sig. | 40 | 98 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_527 | | Transcriptional regulator | insig. | 40 | 92 |
| o | Pseudomonas sp. BP01 | JOY50_RS15435 | | LysR family transcriptional regulator | insig. | 41 | 100 |
| o | Pseudomonas putida KT2440 | PP_1270 | | Transcriptional regulator, LysR family | insig. | 41 | 100 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_14395 | | LysR family transcriptional regulator | sig. | 38 | 97 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3796 | | transcriptional regulator, LysR family | insig. | 36 | 96 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3796 | | transcriptional regulator, LysR family | insig. | 36 | 96 |
| | Rhizobium sp. OAE497 | ABIE40_RS06590 | | LysR family transcriptional regulator | insig. | 34 | 97 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1873 | | Transcriptional regulator | insig. | 34 | 97 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1151 | | Transcriptional regulator | insig. | 32 | 98 |
| | Serratia liquefaciens MT49 | IAI46_12655 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Pseudomonas sp. RS175 | PFR28_04795 | | PCP degradation transcriptional activation protein | insig. | 36 | 70 |
| | Shewanella loihica PV-4 | Shew_3589 | | LysR family transcriptional regulator (RefSeq) | insig. | 34 | 97 |
| | Pseudomonas sp. RS175 | PFR28_01264 | | PCP degradation transcriptional activation protein | sig. | 31 | 97 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03707 | | PCP degradation transcriptional activation protein | cofit | 31 | 97 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2187 | | Transcriptional regulator, LysR family | insig. | 31 | 97 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_20375 | | LysR family transcriptional regulator | insig. | 30 | 97 |
| | Shewanella amazonensis SB2B | Sama_3449 | | regulatory protein, LysR (RefSeq) | strong | 35 | 97 |
| | Pseudomonas simiae WCS417 | PS417_16995 | | LysR family transcriptional regulator | insig. | 31 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_12545 | | LysR family transcriptional regulator | insig. | 29 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_01560 | | LysR family transcriptional regulator | insig. | 31 | 97 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_11960 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3992 | | Transcriptional regulator, LysR family | insig. | 30 | 97 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18945 | | LysR family transcriptional regulator | insig. | 30 | 97 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18945 | | LysR family transcriptional regulator | insig. | 30 | 97 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2596 | | Transcriptional regulator, LysR family | insig. | 29 | 97 |
| | Pseudomonas sp. DMC3 | GFF1478 | | PCP degradation transcriptional activation protein | insig. | 29 | 97 |
| o | Methylophilus sp. DMC18 | GFF1899 | | Nodulation protein D 2 | insig. | 33 | 96 |
| | Enterobacter sp. TBS_079 | MPMX20_02333 | | Nodulation protein D 2 | insig. | 31 | 99 |
| | Pseudomonas stutzeri RCH2 | Psest_2127 | | Transcriptional regulator | insig. | 29 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS04680 | | LysR family transcriptional regulator | insig. | 30 | 98 |
| | Pseudomonas putida KT2440 | PP_2436 | | Transcriptional regulator, LysR family | strong | 30 | 98 |
| | Klebsiella michiganensis M5al | BWI76_RS03630 | | LysR family transcriptional regulator | sig. | 33 | 98 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS17045 | | LysR family transcriptional regulator | insig. | 33 | 91 |
| | Paraburkholderia graminis OAS925 | ABIE53_005185 | | DNA-binding transcriptional LysR family regulator | insig. | 34 | 94 |
| | Pseudomonas sp. SVBP6 | COO64_RS24425 | | LysR family transcriptional regulator | insig. | 30 | 97 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2473 | | transcriptional regulator, LysR family | insig. | 31 | 98 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2473 | | transcriptional regulator, LysR family | insig. | 31 | 98 |
| | Pseudomonas segetis P6 | MPMX49_02374 | | PCP degradation transcriptional activation protein | insig. | 29 | 97 |
| | Enterobacter sp. TBS_079 | MPMX20_02266 | | PCP degradation transcriptional activation protein | insig. | 33 | 95 |
| | Pseudomonas sp. S08-1 | OH686_00880 | | Transcriptional regulator, LysR family | insig. | 28 | 97 |
| | Pseudomonas stutzeri RCH2 | Psest_2748 | | Transcriptional regulator | sig. | 33 | 94 |
| | Marinobacter adhaerens HP15 | HP15_1640 | | transcriptional regulator, LysR family protein | insig. | 30 | 98 |
| | Acinetobacter baumannii LAC-4 | RR41_RS08960 | | LysR family transcriptional regulator | insig. | 30 | 98 |
| | Xanthobacter sp. DMC5 | GFF2011 | | PCP degradation transcriptional activation protein | insig. | 35 | 97 |
| | Acinetobacter radioresistens SK82 | MPMX26_02320 | | HTH-type transcriptional regulator SyrM 1 | strong | 30 | 98 |
| | Alteromonas macleodii MIT1002 | MIT1002_03000 | | HTH-type transcriptional regulator LeuO | insig. | 30 | 98 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_136 | | Transcriptional regulator, LysR family | insig. | 31 | 93 |
| | Ralstonia solanacearum GMI1000 | RS_RS00710 | | transcriptional regulator | insig. | 33 | 92 |
| | Bosea sp. OAE506 | ABIE41_RS06780 | | LysR family transcriptional regulator | insig. | 32 | 94 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4371 | | Transcriptional regulator | no data | 34 | 96 |
| | Pseudomonas putida KT2440 | PP_2551 | | Transcriptional regulator, LysR family | strong | 33 | 96 |
| | Pseudomonas sp. RS175 | PFR28_03920 | | Nodulation protein D 2 | insig. | 32 | 97 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01496 | | transcriptional regulator, LysR family | no data | 35 | 96 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2859 | | LysR-family transcriptional regulator | insig. | 31 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33920 | | LysR family transcriptional regulator | insig. | 30 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS33090 | | LysR family transcriptional regulator | insig. | 32 | 96 |
| | Pseudomonas sp. BP01 | JOY50_RS10225 | | LysR family transcriptional regulator | insig. | 33 | 96 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10100 | | transcriptional regulator | insig. | 33 | 92 |
| | Ralstonia solanacearum UW163 | UW163_RS03480 | | transcriptional regulator | insig. | 33 | 92 |
| | Ralstonia solanacearum GMI1000 | RS_RS05425 | | LysR family transcriptional regulator | insig. | 31 | 96 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS05020 | | transcriptional regulator | insig. | 32 | 96 |
| | Rhizobium sp. OAE497 | ABIE40_RS05450 | | LysR family transcriptional regulator | insig. | 32 | 95 |
| | Agrobacterium fabrum C58 | Atu5259 | | LysR family transcriptional regulator | no data | 32 | 95 |