Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Pseudomonas fluorescens FW300-N2E3 | AO353_08415 | | LysR family transcriptional regulator | insig. | 100 | 100 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2292 | | Transcriptional regulators, LysR family | insig. | 95 | 100 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_960 | | Transcriptional regulators, LysR family | insig. | 93 | 100 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS28610 | | LysR family transcriptional regulator | insig. | 90 | 100 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS28610 | | LysR family transcriptional regulator | insig. | 90 | 100 |
o | Pseudomonas simiae WCS417 | PS417_26950 | | LysR family transcriptional regulator | insig. | 90 | 100 |
o | Pseudomonas putida KT2440 | PP_5138 | | putative transcriptional regulator LysR family | insig. | 78 | 99 |
o | Pseudomonas sp. RS175 | PFR28_01936 | | HTH-type transcriptional activator CmpR | insig. | 74 | 100 |
o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS19870 | | LysR family transcriptional regulator | insig. | 61 | 97 |
o | Ralstonia solanacearum UW163 | UW163_RS19305 | | LysR family transcriptional regulator | insig. | 61 | 97 |
o | Ralstonia sp. UNC404CL21Col | ABZR87_RS20480 | | LysR family transcriptional regulator | insig. | 62 | 97 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS20445 | | LysR substrate-binding domain-containing protein | insig. | 52 | 95 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS28250 | | LysR family transcriptional regulator | insig. | 51 | 95 |
o | Herbaspirillum seropedicae SmR1 | HSERO_RS13130 | | LysR family transcriptional regulator | insig. | 41 | 97 |
o | Variovorax sp. SCN45 | GFF1616 | | Phosphonate uptake and metabolism regulator, LysR-family | insig. | 41 | 97 |
o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2161 | | Transcriptional regulators, LysR family | insig. | 41 | 95 |
| Variovorax sp. SCN45 | GFF1617 | | Phosphonate uptake and metabolism regulator, LysR-family | insig. | 37 | 95 |
| Sinorhizobium meliloti 1021 | SM_b21535 | | LysR family transcriptional regulator | insig. | 35 | 98 |
| Azospirillum sp. SherDot2 | MPMX19_05150 | | HTH-type transcriptional activator CmpR | insig. | 37 | 98 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_2573 | | transcriptional regulator, MerR family | insig. | 37 | 99 |
| Pseudomonas simiae WCS417 | PS417_17135 | | LysR family transcriptional regulator | insig. | 36 | 99 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3961 | | transcriptional regulator, MerR family | insig. | 36 | 99 |
o | Agrobacterium fabrum C58 | Atu4411 | | LysR family transcriptional regulator | insig. | 36 | 92 |
| Pseudomonas putida KT2440 | PP_2547 | | Transcriptional regulator, LysR family | insig. | 35 | 99 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS10625 | | LysR family transcriptional regulator | no data | 33 | 97 |
| Pseudomonas putida KT2440 | PP_2210 | | LysR family transcriptional regulator | strong | 33 | 97 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01130 | | transcriptional regulator, LysR family | no data | 33 | 97 |
| Pseudomonas simiae WCS417 | PS417_17140 | | LysR family transcriptional regulator | insig. | 32 | 97 |
| Paraburkholderia graminis OAS925 | ABIE53_002275 | | aminoethylphosphonate catabolism LysR family transcriptional regulator | insig. | 33 | 97 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_20245 | | LysR family transcriptional regulator | insig. | 33 | 97 |
| Variovorax sp. SCN45 | GFF1625 | | Transcriptional regulator, LysR family | insig. | 31 | 96 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3960 | | Phosphonate uptake and metabolism regulator, LysR-family | no data | 32 | 97 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_2572 | | Phosphonate uptake and metabolism regulator, LysR-family | insig. | 32 | 97 |
| Shewanella loihica PV-4 | Shew_1245 | | LysR family transcriptional regulator (RefSeq) | strong | 31 | 92 |
| Rhodospirillum rubrum S1H | Rru_A2401 | | RuBisCO transcriptional regulator cbbR, LysR family (NCBI) | strong | 31 | 92 |
| Serratia liquefaciens MT49 | IAI46_17215 | | LysR family transcriptional regulator | insig. | 33 | 83 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1310 | cmpR | ndhF3 operon transcriptional regulator | no data | 29 | 88 |
| Rhodopseudomonas palustris CGA009 | TX73_007990 | | LysR family transcriptional regulator | no data | 30 | 95 |
| Dickeya dianthicola 67-19 | HGI48_RS09285 | | LysR family transcriptional regulator | insig. | 32 | 97 |
| Dickeya dadantii 3937 | DDA3937_RS09260 | | LysR family transcriptional regulator | insig. | 34 | 82 |
| Pseudomonas fluorescens SBW25 | PFLU_RS19070 | | LysR family transcriptional regulator | insig. | 31 | 96 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS19070 | | LysR family transcriptional regulator | insig. | 31 | 96 |
| Pectobacterium carotovorum WPP14 | HER17_RS12840 | | LysR family transcriptional regulator | cofit | 33 | 82 |
| Erwinia tracheiphila SCR3 | LU632_RS17295 | | LysR family transcriptional regulator | insig. | 33 | 88 |
| Escherichia coli BL21 | ECD_02086 | | putative DNA-binding transcriptional regulator | insig. | 33 | 82 |
| Escherichia coli ECOR38 | HEPCGN_22760 | yieE | DNA-binding transcriptional regulator YeiE | cofit | 33 | 82 |
| Escherichia coli ECRC101 | OKFHMN_23495 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 33 | 82 |
| Escherichia coli ECRC101 | MCAODC_14545 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 33 | 82 |
| Escherichia coli ECRC102 | NIAGMN_21260 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 33 | 82 |
| Escherichia coli ECRC62 | BNILDI_13990 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 33 | 82 |
| Escherichia coli ECRC98 | JDDGAC_27455 | yieE | DNA-binding transcriptional regulator YeiE | no data | 33 | 82 |
| Escherichia coli ECRC99 | KEDOAH_04690 | yieE | DNA-binding transcriptional regulator YeiE | no data | 33 | 82 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01554 | | HTH-type transcriptional regulator CysL | insig. | 33 | 82 |
| Escherichia coli Nissle 1917 | ECOLIN_RS12630 | | DNA-binding transcriptional regulator YeiE | insig. | 33 | 82 |
| Escherichia coli BW25113 | b2157 | yeiE | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 33 | 82 |
o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3918 | | Transcriptional regulator | insig. | 32 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS34015 | | LysR family transcriptional regulator | insig. | 33 | 95 |
| Dickeya dianthicola ME23 | DZA65_RS09590 | | LysR family transcriptional regulator | insig. | 31 | 97 |
| Dechlorosoma suillum PS | Dsui_2869 | | transcriptional regulator | strong | 34 | 95 |
| Variovorax sp. SCN45 | GFF1740 | | Transcriptional regulator, LysR family | insig. | 34 | 81 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3312 | | transcriptional regulator, LysR family | sig. | 32 | 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3312 | | transcriptional regulator, LysR family | insig. | 32 | 86 |
| Pseudomonas fluorescens SBW25 | PFLU_RS29885 | | LysR family transcriptional regulator | strong | 30 | 96 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS29885 | | LysR family transcriptional regulator | strong | 30 | 96 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3777 | | LysR family transcriptional regulator YeiE | insig. | 32 | 82 |
| Rahnella sp. WP5 | EX31_RS19050 | | LysR family transcriptional regulator | insig. | 32 | 82 |
| Enterobacter sp. TBS_079 | MPMX20_03128 | | HTH-type transcriptional activator CmpR | sig. | 30 | 92 |
| Pseudomonas simiae WCS417 | PS417_28220 | | LysR family transcriptional regulator | strong | 30 | 96 |
| Klebsiella michiganensis M5al | BWI76_RS19690 | | LysR family transcriptional regulator | insig. | 32 | 83 |
| Dechlorosoma suillum PS | Dsui_2410 | | transcriptional regulator | cofit | 29 | 97 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS20425 | | LysR family transcriptional regulator | insig. | 27 | 94 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0399 | | Transcriptional regulator | sig. | 30 | 92 |
| Pseudomonas putida KT2440 | PP_5348 | | Transcriptional regulator, LysR family | strong | 29 | 93 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3174 | | RuBisCO operon transcriptional regulator | insig. | 30 | 88 |
| Pantoea sp. MT58 | IAI47_06680 | | LysR family transcriptional regulator | strong | 31 | 82 |
| Escherichia fergusonii Becca | EFB2_01699 | | HTH-type transcriptional regulator CysL | insig. | 33 | 75 |
| Escherichia coli ECOR27 | NOLOHH_15070 | yieE | DNA-binding transcriptional regulator YeiE | cofit | 33 | 75 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS32870 | | LysR family transcriptional regulator | insig. | 31 | 81 |
| Sinorhizobium meliloti 1021 | SM_b20203 | | transcriptional regulator | no data | 31 | 89 |
| Pseudomonas sp. RS175 | PFR28_04519 | | HTH-type transcriptional activator CmpR | strong | 29 | 97 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4277 | | LysR family transcriptional regulator PA5437 | strong | 29 | 97 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_12015 | | LysR family transcriptional regulator | strong | 29 | 97 |
| Pseudomonas putida KT2440 | PP_3660 | | Transcriptional regulator, LysR family | insig. | 33 | 84 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS19770 | | LysR family transcriptional regulator | insig. | 31 | 88 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_10035 | | LysR family transcriptional regulator | strong | 29 | 96 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2192 | | Cys regulon transcriptional activator CysB | insig. | 28 | 90 |
| Castellaniella sp019104865 MT123 | ABCV34_RS05920 | | LysR substrate-binding domain-containing protein | insig. | 32 | 81 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS31340 | | transcriptional regulator | insig. | 29 | 94 |
| Rhizobium sp. OAE497 | ABIE40_RS14205 | | LysR family transcriptional regulator | insig. | 31 | 81 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2009 | | LysR family transcriptional regulator PA5437 | strong | 29 | 97 |
| Escherichia coli ECOR27 | NOLOHH_23100 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | cofit | 28 | 87 |
| Burkholderia phytofirmans PsJN | BPHYT_RS29890 | | LysR family transcriptional regulator | insig. | 27 | 94 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS04990 | | LysR family transcriptional regulator | insig. | 30 | 97 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_727 | | LysR family transcriptional regulator PA5437 | strong | 30 | 97 |
| Pseudomonas syringae pv. syringae B728a | Psyr_5062 | | transcriptional regulator, LysR family | strong | 29 | 97 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_5062 | | transcriptional regulator, LysR family | sig. | 29 | 97 |
| Escherichia coli BW25113 | b0768 | ybhD | predicted DNA-binding transcriptional regulator (RefSeq) | insig. | 29 | 87 |
| Escherichia coli ECRC101 | OKFHMN_06670 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 28 | 87 |
| Pseudomonas simiae WCS417 | PS417_14015 | | LysR family transcriptional regulator | sig. | 32 | 98 |
| Escherichia fergusonii Becca | EFB2_03338 | | Hydrogen peroxide-inducible genes activator | insig. | 28 | 87 |