Homologs of AMB_RS16670 from Magnetospirillum magneticum AMB-1

diguanylate cyclase
SEED: diguanylate cyclase (GGDEF domain) with PAS/PAC sensor

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Magnetospirillum magneticum AMB-1 AMB_RS16670 diguanylate cyclase insig. 100 100
o Pseudomonas stutzeri RCH2 Psest_0767 diguanylate cyclase (GGDEF) domain sig. 54 97
o Desulfovibrio vulgaris Miyazaki F DvMF_2637 diguanylate cyclase with extracellular sensor (RefSeq) insig. 52 96
o Dechlorosoma suillum PS Dsui_2953 diguanylate cyclase (GGDEF) domain-containing protein cofit 54 92
o Azospirillum sp. SherDot2 MPMX19_05017 hypothetical protein insig. 49 98
o Shewanella oneidensis MR-1 SO0841 GGDEF domain protein (NCBI ptt file) insig. 32 97
o Shewanella sp. ANA-3 Shewana3_3437 diguanylate cyclase (RefSeq) insig. 32 93
  Marinobacter adhaerens HP15 HP15_3452 diguanylate cyclase insig. 33 90
o Alteromonas macleodii MIT1002 MIT1002_01674 Virulence sensor protein BvgS precursor cofit 26 92
  Shewanella sp. ANA-3 Shewana3_1952 diguanylate cyclase (RefSeq) insig. 26 92
  Azospirillum sp. SherDot2 MPMX19_04876 hypothetical protein insig. 45 36
  Magnetospirillum magneticum AMB-1 AMB_RS09815 GGDEF domain-containing protein insig. 48 35
  Magnetospirillum magneticum AMB-1 AMB_RS23415 PAS domain S-box protein cofit 37 49
  Shewanella amazonensis SB2B Sama_1844 extracellular solute-binding protein (RefSeq) cofit 26 92
  Shewanella loihica PV-4 Shew_2080 diguanylate cyclase (RefSeq) insig. 28 90
  Marinobacter adhaerens HP15 HP15_850 GGDEF domain protein insig. 42 41
  Magnetospirillum magneticum AMB-1 AMB_RS23160 PAS domain S-box protein insig. 36 50
  Shewanella loihica PV-4 Shew_3023 diguanylate cyclase (RefSeq) insig. 43 35
  Xanthobacter sp. DMC5 GFF713 hypothetical protein insig. 39 46
  Magnetospirillum magneticum AMB-1 AMB_RS23425 PAS domain S-box protein insig. 36 49
  Pseudomonas stutzeri RCH2 Psest_2106 diguanylate cyclase (GGDEF) domain sig. 48 35
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16460 GGDEF domain-containing protein insig. 48 34
  Acidovorax sp. GW101-3H11 Ac3H11_3582 diguanylate cyclase (GGDEF domain) insig. 45 36
  Pseudomonas fluorescens FW300-N2C3 AO356_24210 diguanylate cyclase sig. 47 35
  Marinobacter adhaerens HP15 HP15_p187g173 protein containing diguanylate cyclase, predicted domains insig. 41 41
  Cupriavidus basilensis FW507-4G11 RR42_RS25885 diguanylate cyclase insig. 46 35
  Shewanella amazonensis SB2B Sama_2623 cyclic nucleotide phosphodiesterase, putative (RefSeq) strong 43 39
  Pseudomonas sp. DMC3 GFF5255 hypothetical protein insig. 43 36
  Shewanella oneidensis MR-1 SO2434 extracellular solute-binding proteins, family 3/GGDEF domain protein (NCBI ptt file) insig. 25 92
  Marinobacter adhaerens HP15 HP15_3345 GGDEF domain protein insig. 44 35
  Desulfovibrio vulgaris Miyazaki F DvMF_0509 diguanylate cyclase (RefSeq) insig. 41 36
  Pseudomonas putida KT2440 PP_2097 Sensory box protein insig. 44 36
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3845 CHASE domain/PAS domain protein insig. 44 36
  Marinobacter adhaerens HP15 HP15_611 diguanylate cyclase insig. 43 35
  Pseudomonas sp. BP01 JOY50_RS22090 diguanylate cyclase insig. 44 36
  Pseudomonas sp. SVBP6 COO64_RS05290 diguanylate cyclase insig. 43 36
  Dechlorosoma suillum PS Dsui_3004 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 48 34
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3367.1 GGDEF family protein insig. 46 36
  Marinobacter adhaerens HP15 HP15_3763 response regulator receiver domain protein (CheY) insig. 42 37
  Magnetospirillum magneticum AMB-1 AMB_RS04735 diguanylate cyclase cofit 40 40
  Azospirillum brasilense Sp245 AZOBR_RS15555 transcriptional regulator insig. 40 45
  Methylophilus sp. DMC18 GFF1420 hypothetical protein cofit 37 45
  Pseudomonas sp. BP01 JOY50_RS14585 sensor domain-containing diguanylate cyclase insig. 34 52
  Pseudomonas sp. RS175 PFR28_02096 hypothetical protein insig. 44 36
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4092 CHASE domain/PAS domain protein insig. 43 36
  Pseudomonas putida KT2440 PP_1411 GGDEF domain protein insig. 40 42
  Herbaspirillum seropedicae SmR1 HSERO_RS05075 diguanylate cyclase insig. 43 37
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04330 hypothetical protein insig. 42 36
  Pseudomonas fluorescens SBW25 PFLU_RS20120 diguanylate cyclase insig. 34 49
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20120 diguanylate cyclase insig. 34 49
  Shewanella sp. ANA-3 Shewana3_2227 diguanylate cyclase (RefSeq) insig. 41 36
  Pseudomonas sp. S08-1 OH686_03265 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 42 36
  Desulfovibrio vulgaris Miyazaki F DvMF_1477 diguanylate cyclase with PAS/PAC sensor (RefSeq) sig. 43 37
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4533 hypothetical protein insig. 42 33
  Pseudomonas sp. S08-1 OH686_05720 hypothetical protein insig. 43 33
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2345 CHASE domain/PAS domain protein insig. 43 36
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1642 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 43 36
  Sinorhizobium meliloti 1021 SMc01370 response regulator PleD insig. 43 38
  Shewanella sp. ANA-3 Shewana3_4330 diguanylate cyclase with GAF sensor (RefSeq) insig. 41 37
  Pseudomonas simiae WCS417 PS417_00435 DeoR faimly transcriptional regulator insig. 46 33
  Rhodopseudomonas palustris CGA009 TX73_021305 diguanylate cyclase insig. 41 36
  Pseudomonas sp. RS175 PFR28_04630 hypothetical protein insig. 45 33
  Magnetospirillum magneticum AMB-1 AMB_RS21975 GGDEF domain-containing protein cofit 43 35
  Pseudomonas fluorescens FW300-N2C3 AO356_02600 nucleotide cyclase insig. 42 36
  Methylophilus sp. DMC18 GFF1240 hypothetical protein insig. 41 34
  Caulobacter crescentus NA1000 CCNA_02546 GGDEF/response regulator protein PleD strong 37 55
  Caulobacter crescentus NA1000 Δfur CCNA_02546 GGDEF/response regulator protein PleD cofit 37 55
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01602 diguanylate cyclase (GGDEF) domain-containing protein insig. 41 42
  Pseudomonas sp. DMC3 GFF1559 hypothetical protein insig. 44 35
  Rhodopseudomonas palustris CGA009 TX73_008830 diguanylate cyclase insig. 43 35
  Pseudomonas syringae pv. syringae B728a Psyr_2110 diguanylate cyclase with PAS/PAC sensor insig. 42 36
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2110 diguanylate cyclase with PAS/PAC sensor insig. 42 36
  Rhodospirillum rubrum S1H Rru_A0985 Putative diguanylate cyclase (GGDEF domain) (NCBI) insig. 36 55
  Pseudomonas aeruginosa MRSN321 DY961_RS21660 sensor domain-containing diguanylate cyclase insig. 49 33
  Pseudomonas aeruginosa PUPa3 DQ20_RS37635 sensor domain-containing diguanylate cyclase sig. 49 33
  Pseudomonas fluorescens FW300-N2E3 AO353_00770 nucleotide cyclase insig. 41 36
  Pseudomonas syringae pv. syringae B728a Psyr_2281 GGDEF domain protein insig. 44 35
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2281 GGDEF domain protein insig. 44 35
  Magnetospirillum magneticum AMB-1 AMB_RS17460 PAS domain S-box protein cofit 43 36
  Rhodopseudomonas palustris CGA009 TX73_020695 diguanylate cyclase insig. 44 36
  Desulfovibrio vulgaris Hildenborough JW710 DVU0940 pleD GGDEF domain protein (TIGR) sig. 42 41
  Pseudomonas sp. S08-1 OH686_05940 GGDEF domain protein cofit 39 41
  Pseudomonas aeruginosa PA14 IKLFDK_23745 histidine kinase insig. 49 33
  Pseudomonas fluorescens FW300-N2C3 AO356_03505 hypothetical protein insig. 44 33
  Desulfovibrio vulgaris Miyazaki F DvMF_2350 diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) insig. 43 35
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0300 diguanylate cyclase (GGDEF) domain insig. 43 40
  Pseudomonas sp. SVBP6 COO64_RS16430 sensor domain-containing diguanylate cyclase insig. 37 43
  Acidovorax sp. GW101-3H11 Ac3H11_2280 diguanylate cyclase insig. 45 35
  Xanthobacter sp. DMC5 GFF2622 hypothetical protein insig. 44 37
  Marinobacter adhaerens HP15 HP15_4000 GGDEF domain membrane protein insig. 44 35
  Pseudomonas fluorescens SBW25 PFLU_RS17410 diguanylate cyclase insig. 44 35
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17410 diguanylate cyclase sig. 44 35
  Marinobacter adhaerens HP15 HP15_3549 diguanylate cyclase insig. 43 35
  Pseudomonas fluorescens SBW25 PFLU_RS22540 GGDEF domain-containing protein insig. 42 36
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22540 GGDEF domain-containing protein insig. 42 36
  Rhodopseudomonas palustris CGA009 TX73_012800 GGDEF domain-containing protein insig. 42 34
  Pseudomonas simiae WCS417 PS417_20925 nucleotide cyclase insig. 42 36
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08350 PleD family two-component system response regulator insig. 41 38
  Pseudomonas syringae pv. syringae B728a Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 41 35
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 41 35