| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Magnetospirillum magneticum AMB-1 | AMB_RS06830 | | DNA-binding response regulator | insig. | 100 | 100 |
| o | Sphingobium sp. HT1-2 | GFF3503 | | two-component response regulator | cofit | 43 | 99 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 43 | 99 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 43 | 99 |
| o | Ralstonia solanacearum GMI1000 | RS_RS11600 | | DNA-binding response regulator | insig. | 45 | 98 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS12850 | | LuxR family transcriptional regulator | strong | 42 | 99 |
| o | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS16955 | | response regulator transcription factor | insig. | 42 | 99 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS30895 | | response regulator transcription factor | insig. | 42 | 98 |
| o | Desulfovibrio vulgaris Miyazaki F | DvMF_1021 | | two component transcriptional regulator, LuxR family (RefSeq) | strong | 42 | 99 |
| o | Pseudomonas sp. SVBP6 | COO64_RS09150 | | response regulator transcription factor | insig. | 41 | 99 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04120 | | DNA-binding response regulator | insig. | 43 | 98 |
| o | Kangiella aquimarina DSM 16071 | B158DRAFT_1737 | | two component transcriptional regulator, LuxR family | insig. | 40 | 99 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS10190 | | LuxR family transcriptional regulator | insig. | 44 | 99 |
| o | Pseudomonas sp. DMC3 | GFF4570 | | Transcriptional regulatory protein DegU | insig. | 39 | 100 |
| o | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09180 | | DNA-binding response regulator | insig. | 42 | 99 |
| o | Pseudomonas sp. S08-1 | OH686_21830 | | Two-component transcriptional response regulator, NarL/FixJ family | insig. | 40 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_19270 | | LuxR family transcriptional regulator | strong | 39 | 100 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_06455 | | DNA-binding response regulator | insig. | 38 | 99 |
| o | Pseudomonas putida KT2440 | PP_2126 | | DNA-binding response regulator, LuxR family | insig. | 38 | 100 |
| o | Ralstonia solanacearum UW163 | UW163_RS09550 | | DNA-binding response regulator | insig. | 42 | 98 |
| o | Desulfovibrio vulgaris Hildenborough JW710 | DVU2577 | | DNA-binding response regulator, LuxR family (TIGR) | strong | 40 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_24485 | | regulator | insig. | 40 | 99 |
| o | Pseudomonas sp. BP01 | JOY50_RS24990 | | response regulator transcription factor | insig. | 38 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_01009 | | Transcriptional regulatory protein DegU | insig. | 37 | 100 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03107 | | two component transcriptional regulator, LuxR family | no data | 41 | 99 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4833 | | DNA-binding response regulator, LuxR family | sig. | 39 | 99 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_232 | | DNA-binding response regulator, LuxR family | insig. | 40 | 86 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_02965 | | LuxR family transcriptional regulator | insig. | 35 | 100 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_3299 | | two component transcriptional regulator, LuxR family | sig. | 37 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3299 | | two component transcriptional regulator, LuxR family | insig. | 37 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04126 | | Transcriptional regulatory protein DegU | cofit | 38 | 100 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_c20200 | | two-component signal transduction system, response regulator | strong | 38 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS21775 | | response regulator transcription factor | insig. | 38 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS04660 | uvrY;go_function=DNA | UvrY/SirA/GacA family response regulator transcription factor | strong | 36 | 99 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_12975 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 36 | 99 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS35320 | uvrY;go_function=DNA | UvrY/SirA/GacA family response regulator transcription factor | strong | 36 | 99 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1296 | | DNA-binding response regulator, LuxR family | strong | 38 | 99 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2418 | | DNA-binding response regulator, LuxR family | insig. | 36 | 100 |
| o | Paraburkholderia graminis OAS925 | ABIE53_004191 | | DNA-binding NarL/FixJ family response regulator | strong | 39 | 99 |
| o | Pseudomonas simiae WCS417 | PS417_19630 | | LuxR family transcriptional regulator | cofit | 38 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2277 | | DNA-binding response regulator, LuxR family | insig. | 38 | 96 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_2345 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 36 | 99 |
| | Ralstonia solanacearum GMI1000 | RS_RS00100 | | DNA-binding response regulator | strong | 39 | 98 |
| o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1897 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 34 | 94 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS05230 | | response regulator transcription factor | insig. | 38 | 98 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS21600 | | response regulator transcription factor | insig. | 38 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21600 | | response regulator transcription factor | sig. | 38 | 100 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS23850 | | DNA-binding response regulator | cofit | 38 | 99 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS09500 | | DNA-binding response regulator | insig. | 38 | 99 |
| | Ralstonia solanacearum UW163 | UW163_RS04080 | | DNA-binding response regulator | insig. | 38 | 99 |
| o | Acinetobacter radioresistens SK82 | MPMX26_00164 | | Response regulator GacA | strong | 38 | 99 |
| o | Synechocystis sp000284455 PCC 6803 | SGL_RS07850 | | response regulator transcription factor | strong | 40 | 99 |
| | Pseudomonas sp. SVBP6 | COO64_RS13925 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | cofit | 36 | 99 |
| o | Dechlorosoma suillum PS | Dsui_1862 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 36 | 99 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2397.1 | | two-component system regulatory protein | insig. | 40 | 98 |
| | Pseudomonas orientalis W4I3 | QF045_RS12800 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 36 | 99 |
| | Pseudomonas sp. RS175 | PFR28_01410 | | Response regulator GacA | strong | 36 | 99 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_1272 | | two component transcriptional regulator, LuxR family | strong | 36 | 99 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 36 | 99 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 36 | 99 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10600 | | DNA-binding response regulator | strong | 36 | 99 |
| | Ralstonia solanacearum UW163 | UW163_RS02980 | | DNA-binding response regulator | strong | 36 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30910 | | response regulator transcription factor | insig. | 39 | 98 |
| | Pseudomonas sp. BP01 | JOY50_RS06870 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | cofit | 35 | 99 |
| | Pseudomonas sp. SVBP6 | COO64_RS05130 | | response regulator transcription factor | insig. | 36 | 100 |
| | Pseudomonas putida KT2440 | PP_4099 | | two-componenent system BarA/UvrY - regulatory subunit | strong | 35 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32080 | | response regulator transcription factor | insig. | 39 | 99 |
| | Ralstonia solanacearum GMI1000 | RS_RS01435 | | DNA-binding response regulator | strong | 35 | 99 |
| | Dechlorosoma suillum PS | Dsui_3469 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | cofit | 40 | 98 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS08760 | | XRE family transcriptional regulator | no data | 38 | 99 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS30900 | | transcriptional regulator | sig. | 37 | 99 |
| | Pseudomonas simiae WCS417 | PS417_10720 | | chemotaxis protein CheY | strong | 36 | 99 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS06400 | | response regulator transcription factor | strong | 36 | 99 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS22720 | | DNA-binding response regulator | strong | 35 | 99 |
| o | Rhodopseudomonas palustris CGA009 | TX73_007655 | | response regulator transcription factor | cofit | 39 | 99 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS01790 | | LuxR family transcriptional regulator | strong | 37 | 100 |
| | Pseudomonas sp. S08-1 | OH686_15085 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 38 | 99 |
| o | Variovorax sp. OAS795 | ABID97_RS28185 | | response regulator transcription factor | insig. | 38 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS00505 | | response regulator transcription factor RqpR | strong | 37 | 100 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02179 | | two component transcriptional regulator, LuxR family | cofit | 36 | 100 |
| | Paraburkholderia graminis OAS925 | ABIE53_000448 | | two-component system invasion response regulator UvrY | strong | 36 | 100 |
| o | Pseudomonas stutzeri RCH2 | Psest_2260 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 35 | 99 |
| | Pseudomonas stutzeri RCH2 | Psest_0662 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 39 | 100 |
| | Alteromonas macleodii MIT1002 | MIT1002_03526 | | Nitrogen regulation protein C | insig. | 39 | 100 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | strong | 35 | 99 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | strong | 35 | 99 |
| o | Methylophilus sp. DMC18 | GFF1242 | | Response regulator UvrY | cofit | 34 | 99 |
| o | Escherichia coli BW25113 | b1914 | uvrY | response regulator (NCBI) | sig. | 35 | 98 |
| o | Escherichia coli ECOR27 | NOLOHH_16440 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | sig. | 35 | 98 |
| o | Escherichia coli ECRC62 | BNILDI_15230 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | insig. | 35 | 98 |
| o | Agrobacterium fabrum C58 | Atu5267 | | two component response regulator | no data | 39 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS42425 | | response regulator transcription factor | insig. | 37 | 99 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS06015 | | hisitidine kinase | strong | 34 | 99 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS18540 | | DNA-binding response regulator | cofit | 37 | 100 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS17790 | | response regulator | sig. | 37 | 99 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 36 | 99 |
| o | Pseudomonas segetis P6 | ACVTMO_RS12520 | gacA | response regulator transcription factor GacA | strong | 36 | 99 |
| o | Dickeya dianthicola 67-19 | HGI48_RS13800 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 35 | 99 |
| o | Dickeya dianthicola ME23 | DZA65_RS14290 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 35 | 99 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3581 | | Secretion system regulator of DegU/UvrY/BvgA type | insig. | 36 | 99 |