Homologs of ABZR87_RS10120 from Ralstonia sp. UNC404CL21Col

YceD family protein
SEED: COG1399 protein, clustered with ribosomal protein L32p
KEGG: uncharacterized protein

63 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Ralstonia sp. UNC404CL21Col ABZR87_RS10120 YceD family protein insig. 100 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14405 metal-binding protein no data 82 100
o Ralstonia solanacearum UW163 UW163_RS11870 metal-binding protein no data 82 100
o Ralstonia solanacearum GMI1000 RS_RS05185 metal-binding protein insig. 78 100
o Ralstonia solanacearum PSI07 RPSI07_RS19055 metal-binding protein no data 83 100
o Cupriavidus basilensis FW507-4G11 RR42_RS14125 metal-binding protein strong 55 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS04530 DUF177 domain-containing protein insig. 46 85
  Paraburkholderia graminis OAS925 ABIE53_003052 uncharacterized protein sig. 41 98
o Burkholderia phytofirmans PsJN BPHYT_RS14450 hypothetical protein sig. 39 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04346 uncharacterized protein insig. 39 98
o Dechlorosoma suillum PS Dsui_2443 putative metal-binding protein, possibly nucleic-acid binding protein insig. 38 97
o Herbaspirillum seropedicae SmR1 HSERO_RS09580 DNA-binding protein no data 39 98
o Castellaniella sp019104865 MT123 ABCV34_RS08395 YceD family protein insig. 36 98
o Acidovorax sp. GW101-3H11 Ac3H11_1583 COG1399 protein, clustered with ribosomal protein L32p cofit 37 97
o Variovorax sp. OAS795 ABID97_RS08285 DUF177 domain-containing protein no data 35 96
o Pseudomonas aeruginosa PA14 IKLFDK_15115 metal-binding protein cofit 33 96
  Variovorax sp. SCN45 GFF3854 FIG01269488: protein, clustered with ribosomal protein L32p insig. 39 84
o Pseudomonas stutzeri RCH2 Psest_1684 Predicted metal-binding, possibly nucleic acid-binding protein no data 35 83
o Methylophilus sp. DMC18 GFF1262 hypothetical protein cofit 34 88
  Rahnella sp. WP5 EX31_RS24410 23S rRNA accumulation protein YceD cofit 38 64
  Dickeya dianthicola 67-19 HGI48_RS13210 23S rRNA accumulation protein YceD insig. 39 65
  Pectobacterium carotovorum WPP14 HER17_RS08625 23S rRNA accumulation protein YceD insig. 38 65
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4000.1 COG1399 protein, clustered with ribosomal protein L32p insig. 38 61
  Dickeya dianthicola ME23 DZA65_RS13680 23S rRNA accumulation protein YceD no data 38 65
  Dickeya dadantii 3937 DDA3937_RS13145 23S rRNA accumulation protein YceD strong 39 63
  Escherichia coli BL21 ECD_01084 DUF177 family protein strong 39 63
  Escherichia fergusonii Becca EFB2_02887 Large ribosomal RNA subunit accumulation protein YceD strong 39 63
  Escherichia coli ECOR27 NOLOHH_21130 yceD 23S rRNA accumulation protein YceD insig. 39 63
  Escherichia coli ECOR38 HEPCGN_23880 yceD 23S rRNA accumulation protein YceD strong 39 63
  Escherichia coli ECRC100 OKFHMN_03600 yceD 23S rRNA accumulation protein YceD cofit 39 63
  Escherichia coli ECRC101 MCAODC_22960 yceD 23S rRNA accumulation protein YceD strong 39 63
  Escherichia coli ECRC102 NIAGMN_24230 yceD 23S rRNA accumulation protein YceD strong 39 63
  Escherichia coli ECRC62 BNILDI_19290 yceD 23S rRNA accumulation protein YceD strong 39 63
  Escherichia coli ECRC98 JDDGAC_07260 yceD 23S rRNA accumulation protein YceD strong 39 63
  Escherichia coli ECRC99 KEDOAH_24155 yceD 23S rRNA accumulation protein YceD no data 39 63
  Escherichia coli Nissle 1917 ECOLIN_RS06290 23S rRNA accumulation protein YceD cofit 39 63
  Escherichia coli BW25113 b1088 yceD hypothetical protein (NCBI) strong 39 63
  Pantoea sp. MT58 IAI47_12095 23S rRNA accumulation protein YceD no data 41 56
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02578 Large ribosomal RNA subunit accumulation protein YceD insig. 38 63
  Klebsiella michiganensis M5al BWI76_RS11065 hypothetical protein no data 38 63
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3330 COG1399 protein, clustered with ribosomal protein L32p no data 32 97
  Enterobacter sp. TBS_079 MPMX20_01768 Large ribosomal RNA subunit accumulation protein YceD sig. 39 57
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3370 COG1399 protein, clustered with ribosomal protein L32p cofit 39 57
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05240 23S rRNA accumulation protein YceD cofit 39 56
  Enterobacter asburiae PDN3 EX28DRAFT_1841 Predicted metal-binding, possibly nucleic acid-binding protein insig. 39 57
  Erwinia amylovora T8 OLJFJH_15555 23S rRNA accumulation protein YceD sig. 40 57
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_00705 yceD 23S rRNA accumulation protein YceD no data 40 57
  Erwinia tracheiphila SCR3 LU632_RS14845 yceD 23S rRNA accumulation protein YceD insig. 40 57
  Klebsiella pneumoniae MKP103 KDGMDA_18670 23S rRNA accumulation protein YceD sig. 38 57
  Pseudomonas sp. RS175 PFR28_03014 Large ribosomal RNA subunit accumulation protein YceD no data 34 62
  Shewanella amazonensis SB2B Sama_1985 hypothetical protein (RefSeq) no data 40 56
  Serratia liquefaciens MT49 IAI46_09765 23S rRNA accumulation protein YceD no data 36 63
o Pseudomonas segetis P6 MPMX49_02076 Large ribosomal RNA subunit accumulation protein YceD no data 30 88
  Pseudomonas sp. S08-1 OH686_22120 protein, clustered with ribosomal protein L32p no data 37 53
  Shewanella loihica PV-4 Shew_1598 hypothetical protein (RefSeq) no data 35 60
  Lysobacter sp. OAE881 ABIE51_RS13965 YceD family protein no data 35 62
  Shewanella sp. ANA-3 Shewana3_2563 hypothetical protein (RefSeq) no data 36 56
  Shewanella oneidensis MR-1 SO2781 conserved hypothetical protein (NCBI ptt file) no data 37 56
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS06190 YceD family protein cofit 35 70
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS08865 YceD family protein no data 35 76
  Alteromonas macleodii MIT1002 MIT1002_01728 hypothetical protein no data 31 88
  Vibrio cholerae E7946 ATCC 55056 CSW01_10120 23S rRNA accumulation protein YceD no data 26 87
  Rhodanobacter denitrificans MT42 LRK55_RS00980 YceD family protein no data 33 70