Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS01090 | | sigma-70 family RNA polymerase sigma factor | insig. | 100 | 100 |
o | Caulobacter crescentus NA1000 | CCNA_03362 | | ECF-family RNA polymerase sigma factor | strong | 55 | 94 |
o | Caulobacter crescentus NA1000 Δfur | CCNA_03362 | | ECF-family RNA polymerase sigma factor | cofit | 55 | 94 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS25560 | | RNA polymerase sigma factor | insig. | 49 | 92 |
o | Variovorax sp. OAS795 | ABID97_RS16825 | | sigma-70 family RNA polymerase sigma factor | insig. | 49 | 94 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1827 | | RNA polymerase sigma-70 factor, ECF subfamily | insig. | 49 | 92 |
o | Variovorax sp. SCN45 | GFF320 | | RNA polymerase ECF-type sigma factor | insig. | 51 | 94 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS20845 | | sigma-70 family RNA polymerase sigma factor | insig. | 47 | 92 |
o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3636 | | RNA polymerase sigma factor, sigma-70 family | insig. | 48 | 92 |
o | Herbaspirillum seropedicae SmR1 | HSERO_RS16195 | | RNA polymerase sigma factor | insig. | 47 | 92 |
| Burkholderia phytofirmans PsJN | BPHYT_RS25505 | | RNA polymerase sigma factor | insig. | 46 | 93 |
o | Agrobacterium fabrum C58 | Atu2268 | | ECF family sigma factor | insig. | 48 | 88 |
o | Pseudomonas stutzeri RCH2 | Psest_0114 | | RNA polymerase sigma factor, sigma-70 family | insig. | 46 | 95 |
o | Pseudomonas putida KT2440 | PP_0994 | | putative RNA polymerase sigma factor | insig. | 46 | 96 |
o | Rhizobium sp. OAE497 | ABIE40_RS01010 | | sigma-70 family RNA polymerase sigma factor | insig. | 39 | 92 |
o | Dechlorosoma suillum PS | Dsui_0155 | | RNA polymerase sigma factor, sigma-70 family | strong | 41 | 92 |
o | Bosea sp. OAE506 | ABIE41_RS02435 | | sigma-70 family RNA polymerase sigma factor | insig. | 41 | 91 |
o | Rhodopseudomonas palustris CGA009 | TX73_009325 | | sigma-70 family RNA polymerase sigma factor | insig. | 37 | 94 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01786 | | RNA polymerase sigma-70 factor, ECF subfamily | insig. | 44 | 95 |
o | Azospirillum sp. SherDot2 | MPMX19_04570 | | ECF RNA polymerase sigma factor SigF | insig. | 36 | 90 |
o | Sinorhizobium meliloti 1021 | SM_b20531 | | RNA polymerase sigma factor | insig. | 37 | 92 |
| Rhizobium sp. OAE497 | ABIE40_RS19610 | | sigma-70 family RNA polymerase sigma factor | insig. | 35 | 97 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_03490 | | hypothetical protein | insig. | 36 | 85 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS09080 | | sigma-70 family RNA polymerase sigma factor | cofit | 34 | 85 |
o | Pantoea sp. MT58 | IAI47_20240 | | sigma-70 family RNA polymerase sigma factor | insig. | 34 | 89 |
| Rhodanobacter denitrificans MT42 | LRK55_RS14380 | | sigma-70 family RNA polymerase sigma factor | insig. | 37 | 89 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS14665 | | sigma-70 family RNA polymerase sigma factor | insig. | 37 | 89 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_3853 | | RNA polymerase sigma factor, sigma-70 family | insig. | 34 | 84 |
| Sinorhizobium meliloti 1021 | SMc01506 | | RNA polymerase sigma factor | strong | 33 | 66 |
| Rhodospirillum rubrum S1H | Rru_A3287 | | Sigma-24 (FecI) (NCBI) | no data | 32 | 78 |
| Rhizobium sp. OAE497 | ABIE40_RS14450 | | RNA polymerase sigma factor | insig. | 33 | 64 |
| Azospirillum brasilense Sp245 | AZOBR_RS06360 | | RNA polymerase subunit sigma-24 | no data | 33 | 75 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS15190 | | RNA polymerase sigma factor | insig. | 29 | 72 |
| Burkholderia phytofirmans PsJN | BPHYT_RS08240 | | RNA polymerase subunit sigma-24 | sig. | 35 | 77 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_0139 | | RNA polymerase sigma factor, sigma-70 family | insig. | 31 | 77 |
| Azospirillum brasilense Sp245 | AZOBR_RS00810 | | RNA polymerase sigma factor RpoE | insig. | 34 | 66 |
| Caulobacter crescentus NA1000 | CCNA_03589 | | RNA polymerase EcfG family sigma factor sigT | strong | 32 | 82 |
| Caulobacter crescentus NA1000 Δfur | CCNA_03589 | | RNA polymerase EcfG family sigma factor sigT | cofit | 32 | 82 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS14775 | | sigma-70 family RNA polymerase sigma factor | strong | 32 | 82 |
| Azospirillum sp. SherDot2 | MPMX19_00764 | | ECF RNA polymerase sigma factor EcfG | insig. | 30 | 80 |
| Bosea sp. OAE506 | ABIE41_RS04095 | | sigma-70 family RNA polymerase sigma factor | strong | 30 | 70 |
| Azospirillum brasilense Sp245 | AZOBR_RS10625 | | RNA polymerase sigma-70 factor | insig. | 31 | 72 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05124 | | RNA polymerase sigma-70 factor, ECF subfamily | insig. | 36 | 70 |
| Paraburkholderia graminis OAS925 | ABIE53_002425 | | RNA polymerase sigma-70 factor (ECF subfamily) | insig. | 34 | 78 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05041 | | RNA polymerase sigma-70 factor, ECF subfamily | insig. | 29 | 80 |
| Caulobacter crescentus NA1000 | CCNA_02977 | | RNA polymerase ECF-type sigma factor sigU | strong | 29 | 80 |
| Caulobacter crescentus NA1000 Δfur | CCNA_02977 | | RNA polymerase ECF-type sigma factor sigU | cofit | 29 | 80 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_3492 | | RNA polymerase sigma factor, sigma-70 family | strong | 35 | 81 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS02635 | | RNA polymerase sigma factor | insig. | 33 | 75 |
| Azospirillum sp. SherDot2 | MPMX19_01371 | | hypothetical protein | insig. | 31 | 72 |
| Azospirillum sp. SherDot2 | MPMX19_02022 | | ECF RNA polymerase sigma factor RpoE | insig. | 31 | 81 |
| Shewanella loihica PV-4 | Shew_1231 | | ECF subfamily RNA polymerase sigma-24 factor (RefSeq) | insig. | 30 | 92 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_05040 | | RNA polymerase subunit sigma | insig. | 29 | 89 |
| Variovorax sp. SCN45 | GFF4558 | | RNA polymerase ECF-type sigma factor | insig. | 33 | 84 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS01495 | | sigma-70 family RNA polymerase sigma factor | insig. | 30 | 89 |
| Bacteroides ovatus ATCC 8483 | BACOVA_03129 | | Sigma-70 region 2 | insig. | 29 | 77 |
| Rhizobium sp. OAE497 | ABIE40_RS18210 | | sigma-70 family RNA polymerase sigma factor | insig. | 31 | 82 |
o | Mycobacterium tuberculosis H37Rv | Rv3414c | | Probable alternative RNA polymerase sigma-D factor SigD | sig. | 30 | 89 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS01700 | | RNA polymerase sigma factor | insig. | 27 | 72 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS00795 | | sigma-70 family RNA polymerase sigma factor | strong | 26 | 77 |
| Pseudomonas stutzeri RCH2 | Psest_3456 | | RNA polymerase sigma factor, sigma-70 family | insig. | 30 | 95 |
| Dinoroseobacter shibae DFL-12 | Dshi_3835 | | RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) | insig. | 29 | 73 |
| Rhodospirillum rubrum S1H | Rru_A0722 | | Sigma-24 (FecI) (NCBI) | insig. | 29 | 81 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3981 | | RNA polymerase sigma-70 factor, Bacteroides expansion family 1 | insig. | 28 | 75 |
| Alteromonas macleodii MIT1002 | MIT1002_01916 | | RNA polymerase sigma factor CarQ | insig. | 29 | 69 |
| Alteromonas macleodii MIT1002 | MIT1002_00882 | | Sigma-W factor | insig. | 26 | 83 |
| Azospirillum brasilense Sp245 | AZOBR_RS28490 | | hypothetical protein | sig. | 30 | 95 |
| Bacteroides stercoris CC31F | HMPREF1181_RS02545 | | sigma-70 family RNA polymerase sigma factor | insig. | 31 | 73 |
| Mycobacterium tuberculosis H37Rv | Rv1221 | | Alternative RNA polymerase sigma factor SigE | insig. | 30 | 74 |
| Agrobacterium fabrum C58 | Atu4160 | | RNA polymerase sigma factor | strong | 30 | 64 |
| Sinorhizobium meliloti 1021 | SMc01419 | | RNA polymerase sigma factor protein | sig. | 28 | 72 |
| Bacteroides stercoris CC31F | HMPREF1181_RS04900 | | RNA polymerase sigma-70 factor | insig. | 25 | 95 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS00565 | | RNA polymerase sigma factor | insig. | 36 | 56 |
| Shewanella loihica PV-4 | Shew_1476 | | RNA polymerase sigma factor (RefSeq) | insig. | 28 | 77 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_4300 | | RNA polymerase sigma factor, sigma-70 family | insig. | 28 | 77 |
| Phaeobacter inhibens DSM 17395 | PGA1_c27070 | | RNA polymerase sigma factor 70 (ECF15 subgroup, ECF26 subgroup) | insig. | 34 | 63 |
| Shewanella amazonensis SB2B | Sama_2036 | | ECF subfamily RNA polymerase sigma-24 factor (RefSeq) | insig. | 30 | 83 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS12095 | | RNA polymerase subunit sigma-70 | insig. | 22 | 74 |
| Caulobacter crescentus NA1000 | CCNA_02837 | | RNA polymerase ECF-type sigma factor | insig. | 32 | 85 |
| Caulobacter crescentus NA1000 Δfur | CCNA_02837 | | RNA polymerase ECF-type sigma factor | cofit | 32 | 85 |
| Bacteroides ovatus ATCC 8483 | BACOVA_05165 | | Sigma-70 region 2 | insig. | 26 | 71 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS23005 | | sigma-70 family RNA polymerase sigma factor | insig. | 31 | 77 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS02030 | | RNA polymerase sigma-70 factor | insig. | 28 | 86 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS03700 | | RNA polymerase sigma factor | insig. | 29 | 81 |
| Azospirillum sp. SherDot2 | MPMX19_05214 | | ECF RNA polymerase sigma factor SigE | insig. | 29 | 95 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS13165 | | RNA polymerase sigma factor | insig. | 27 | 71 |
| Bacteroides stercoris CC31F | HMPREF1181_RS08110 | | sigma-70 family RNA polymerase sigma factor | insig. | 26 | 80 |
| Bacteroides thetaiotaomicron VPI-5482 | BT3269 | | RNA polymerase ECF-type sigma factor (NCBI ptt file) | sig. | 26 | 91 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS00095 | | RNA polymerase sigma factor | insig. | 28 | 78 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS04680 | | RNA polymerase sigma factor | insig. | 27 | 73 |
| Bacteroides thetaiotaomicron VPI-5482 | BT0188 | | RNA polymerase ECF-type sigma factor (NCBI ptt file) | sig. | 26 | 95 |
| Bacteroides thetaiotaomicron VPI-5482 | BT4347 | | RNA polymerase ECF-type sigma factor (NCBI ptt file) | insig. | 27 | 71 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_11965 | | RNA polymerase subunit sigma | insig. | 25 | 71 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS04575 | | RNA polymerase sigma factor RpoE | strong | 25 | 85 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS16675 | | hypothetical protein | insig. | 27 | 74 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4350 | | RNA polymerase sigma-54 factor RpoN | insig. | 31 | 76 |
| Rhodopseudomonas palustris CGA009 | TX73_002850 | | sigma-70 family RNA polymerase sigma factor | insig. | 29 | 87 |
| Azospirillum sp. SherDot2 | MPMX19_05475 | | hypothetical protein | no data | 32 | 61 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS35625 | | RNA polymerase sigma24 factor | insig. | 30 | 84 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS12120 | | RNA polymerase sigma factor | sig. | 27 | 73 |