Homologs of Shewana3_3488 from Shewanella sp. ANA-3

diguanylate cyclase (RefSeq)
SEED: GGDEF family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella sp. ANA-3 Shewana3_3488 diguanylate cyclase (RefSeq) cofit 100 100
o Shewanella oneidensis MR-1 SO0796 GGDEF family protein (NCBI ptt file) insig. 82 100
o Shewanella loihica PV-4 Shew_2545 diguanylate cyclase (RefSeq) insig. 65 98
  Magnetospirillum magneticum AMB-1 AMB_RS23665 GGDEF domain-containing protein insig. 34 98
  Desulfovibrio vulgaris Miyazaki F DvMF_2350 diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) insig. 43 63
o Vibrio cholerae E7946 ATCC 55056 CSW01_05235 GGDEF domain-containing protein cofit 30 97
  Pseudomonas aeruginosa PA14 IKLFDK_14585 GGDEF domain-containing protein insig. 42 66
  Pseudomonas aeruginosa MRSN321 DY961_RS02640 GGDEF domain-containing protein insig. 42 66
  Pseudomonas aeruginosa PUPa3 DQ20_RS32955 GGDEF domain-containing protein insig. 42 66
  Marinobacter adhaerens HP15 HP15_p187g173 protein containing diguanylate cyclase, predicted domains insig. 37 69
  Pseudomonas fluorescens FW300-N2C3 AO356_24210 diguanylate cyclase sig. 40 60
  Pseudomonas sp. RS175 PFR28_02096 hypothetical protein insig. 37 64
  Pseudomonas stutzeri RCH2 Psest_0767 diguanylate cyclase (GGDEF) domain sig. 42 57
  Desulfovibrio vulgaris Hildenborough JW710 DVU3068 GAF domain/sensory box/EAL domain protein (TIGR) insig. 41 66
  Pseudomonas segetis P6 ACVTMO_RS22305 diguanylate cyclase sig. 37 80
  Azospirillum brasilense Sp245 AZOBR_RS10245 diguanylate cyclase sig. 33 84
  Acidovorax sp. GW101-3H11 Ac3H11_3345 hypothetical protein insig. 41 61
  Shewanella amazonensis SB2B Sama_3210 GGDEF domain-containing protein (RefSeq) strong 41 56
  Pseudomonas putida KT2440 PP_2097 Sensory box protein insig. 38 62
  Marinobacter adhaerens HP15 HP15_2378 sensory box/GGDEF family protein insig. 37 60
  Bosea sp. OAE506 ABIE41_RS24040 EAL domain-containing protein strong 36 65
  Rhodanobacter denitrificans MT42 LRK55_RS10100 GGDEF domain-containing protein insig. 41 59
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10460 GGDEF domain-containing protein insig. 41 59
  Pseudomonas sp. S08-1 OH686_03265 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 38 59
  Dechlorosoma suillum PS Dsui_0970 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 43 58
  Sinorhizobium meliloti 1021 SMc01370 response regulator PleD insig. 42 56
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1642 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 40 60
  Pseudomonas sp. SVBP6 COO64_RS12490 sensor domain-containing diguanylate cyclase insig. 31 84
  Magnetospirillum magneticum AMB-1 AMB_RS21975 GGDEF domain-containing protein cofit 41 58
  Rhodanobacter sp. FW510-T8 OKGIIK_13465 gGDEF GGDEF domain-containing protein insig. 40 59
  Pseudomonas orientalis W4I3 QF045_RS07670 sensor domain-containing diguanylate cyclase insig. 40 58
  Shewanella amazonensis SB2B Sama_0530 response regulator receiver protein (RefSeq) cofit 43 55
  Methylophilus sp. DMC18 GFF1420 hypothetical protein cofit 40 58
  Pseudomonas stutzeri RCH2 Psest_2106 diguanylate cyclase (GGDEF) domain sig. 39 59
  Desulfovibrio vulgaris Miyazaki F DvMF_2637 diguanylate cyclase with extracellular sensor (RefSeq) insig. 31 98
  Pseudomonas sp. DMC3 GFF5255 hypothetical protein insig. 40 60
  Azospirillum sp. SherDot2 MPMX19_01264 hypothetical protein insig. 33 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2345 CHASE domain/PAS domain protein insig. 40 60
  Pseudomonas simiae WCS417 PS417_00910 diguanylate cyclase insig. 38 62
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2528 GGDEF domain protein insig. 43 52
  Enterobacter sp. TBS_079 MPMX20_02446 Diguanylate cyclase DgcM insig. 39 61
  Sphingobium sp. HT1-2 GFF2539 hypothetical protein cofit 41 56
  Shewanella loihica PV-4 Shew_0452 diguanylate cyclase (RefSeq) insig. 41 54
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3845 CHASE domain/PAS domain protein insig. 40 60
  Bosea sp. OAE506 ABIE41_RS18170 PleD family two-component system response regulator insig. 32 97
  Pseudomonas segetis P6 ACVTMO_RS21215 histidine kinase N-terminal 7TM domain-containing diguanylate cyclase insig. 40 56
  Azospirillum sp. SherDot2 MPMX19_03993 hypothetical protein insig. 39 63
  Pseudomonas fluorescens SBW25 PFLU_RS00925 sensor domain-containing diguanylate cyclase insig. 39 61
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00925 sensor domain-containing diguanylate cyclase sig. 39 61
  Dechlorosoma suillum PS Dsui_2953 diguanylate cyclase (GGDEF) domain-containing protein cofit 44 57
  Pseudomonas fluorescens FW300-N2C3 AO356_03505 hypothetical protein insig. 43 52
  Desulfovibrio vulgaris Hildenborough JW710 DVU0940 pleD GGDEF domain protein (TIGR) sig. 43 55
  Azospirillum sp. SherDot2 MPMX19_04290 hypothetical protein insig. 42 54
  Pseudomonas orientalis W4I3 QF045_RS03980 sensor domain-containing diguanylate cyclase cofit 40 61
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00405 hypothetical protein cofit 39 62
  Pseudomonas sp. RS175 PFR28_00898 hypothetical protein cofit 43 52
  Pseudomonas fluorescens FW300-N2C3 AO356_24815 diguanylate cyclase insig. 41 58
  Cupriavidus basilensis FW507-4G11 RR42_RS25885 diguanylate cyclase insig. 41 58
  Azospirillum sp. SherDot2 MPMX19_01436 hypothetical protein insig. 40 58
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4092 CHASE domain/PAS domain protein insig. 39 60
  Shewanella amazonensis SB2B Sama_3137 response regulator receiver protein (RefSeq) strong 37 56
  Pseudomonas sp. BP01 JOY50_RS22090 diguanylate cyclase insig. 37 63
  Pseudomonas fluorescens GW456-L13 PfGW456L13_492 Sensory box/GGDEF family protein insig. 37 60
  Rhodospirillum rubrum S1H Rru_A1908 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation (NCBI) insig. 32 95
  Marinobacter adhaerens HP15 HP15_3803 GGDEF domain-like protein insig. 31 97
  Magnetospirillum magneticum AMB-1 AMB_RS09815 GGDEF domain-containing protein insig. 40 55
  Pseudomonas fluorescens FW300-N2E3 AO353_00770 nucleotide cyclase insig. 39 60
  Magnetospirillum magneticum AMB-1 AMB_RS06820 GGDEF domain-containing protein cofit 43 54
  Shewanella loihica PV-4 Shew_3023 diguanylate cyclase (RefSeq) insig. 42 56
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16460 GGDEF domain-containing protein insig. 41 54
  Pseudomonas sp. S08-1 OH686_11660 hypothetical protein cofit 38 62
  Acidovorax sp. GW101-3H11 Ac3H11_1120 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) insig. 42 55
  Kangiella aquimarina DSM 16071 B158DRAFT_0300 diguanylate cyclase (GGDEF) domain insig. 42 54
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_359 GGDEF domain protein insig. 42 52
  Marinobacter adhaerens HP15 HP15_850 GGDEF domain protein insig. 40 54
  Pseudomonas sp. RS175 PFR28_04429 hypothetical protein insig. 38 56
  Pseudomonas syringae pv. syringae B728a Psyr_2110 diguanylate cyclase with PAS/PAC sensor insig. 39 60
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2110 diguanylate cyclase with PAS/PAC sensor insig. 39 60
  Rhodanobacter sp. FW510-T8 OKGIIK_09270 Diguanylate cyclase insig. 35 60
  Pseudomonas orientalis W4I3 QF045_RS21090 GGDEF domain-containing protein cofit 43 52
  Magnetospirillum magneticum AMB-1 AMB_RS23160 PAS domain S-box protein insig. 40 56
  Marinobacter adhaerens HP15 HP15_3763 response regulator receiver domain protein (CheY) insig. 40 55
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4011 Sensory box/GGDEF family protein insig. 37 61
  Magnetospirillum magneticum AMB-1 AMB_RS17460 PAS domain S-box protein cofit 35 62
  Synechococcus elongatus PCC 7942 Synpcc7942_1811 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor sig. 35 60
  Desulfovibrio vulgaris Miyazaki F DvMF_0509 diguanylate cyclase (RefSeq) insig. 43 54
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_656 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 41 58
  Shewanella sp. ANA-3 Shewana3_3733 diguanylate cyclase (RefSeq) sig. 40 56
  Acidovorax sp. GW101-3H11 Ac3H11_3285 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 40 58
  Pseudomonas syringae pv. syringae B728a Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 38 59
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 38 59
  Pseudomonas sp. RS175 PFR28_04758 hypothetical protein insig. 37 61
  Escherichia coli BL21 ECD_00332 diguanylate cyclase, cellulose regualtor insig. 37 59
  Escherichia coli ECOR38 HEPCGN_07255 adrA diguanylate cyclase AdrA insig. 37 59
  Escherichia coli Nissle 1917 ECOLIN_RS02340 diguanylate cyclase AdrA insig. 37 59
  Escherichia coli BW25113 b0385 yaiC predicted diguanylate cyclase (NCBI) strong 37 59
  Pseudomonas fluorescens FW300-N2C3 AO356_10705 diguanylate cyclase insig. 37 61
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1731 Sensory box/GGDEF family protein insig. 36 61
  Rhodospirillum rubrum S1H Rru_A1272 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) insig. 35 71
  Pseudomonas fluorescens FW300-N2E3 AO353_02110 hypothetical protein insig. 43 52