Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Shewanella amazonensis SB2B | Sama_1071 | | response regulator receiver protein (RefSeq) | insig. | 100 | 100 |
o | Shewanella oneidensis MR-1 | SO1387 | | HD domain protein (NCBI ptt file) | insig. | 44 | 96 |
o | Shewanella loihica PV-4 | Shew_1882 | | metal dependent phosphohydrolase (RefSeq) | insig. | 43 | 98 |
| Pseudomonas stutzeri RCH2 | Psest_2701 | | Response regulator containing a CheY-like receiver domain and an HD-GYP domain | insig. | 33 | 76 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_06795 | | two-component system response regulator | insig. | 36 | 49 |
| Azospirillum brasilense Sp245 | AZOBR_RS00185 | | transcriptional regulator | insig. | 37 | 51 |
| Acidovorax sp. GW101-3H11 | Ac3H11_2310 | | Pole remodelling regulatory diguanylate cyclase | insig. | 35 | 64 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_06540 | | metal-dependent phosphohydrolase | insig. | 31 | 53 |
| Azospirillum sp. SherDot2 | MPMX19_02416 | | 3'3'-cGAMP-specific phosphodiesterase 2 | insig. | 37 | 51 |
| Rhodopseudomonas palustris CGA009 | TX73_000745 | | response regulator | insig. | 37 | 48 |
| Pseudomonas sp. RS175 | PFR28_01438 | | Cyclic di-GMP phosphodiesterase response regulator RpfG | insig. | 33 | 49 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1097 | | response regulator receiver modulated metal dependent phosphohydrolase (RefSeq) | insig. | 33 | 53 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1771 | | Response regulator | insig. | 32 | 49 |
| Acidovorax sp. GW101-3H11 | Ac3H11_2270 | | Pole remodelling regulatory diguanylate cyclase | insig. | 34 | 48 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS34710 | | chemotaxis protein CheY | insig. | 32 | 54 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_29820 | | phosphohydrolase | insig. | 32 | 49 |
| Dechlorosoma suillum PS | Dsui_0777 | | response regulator containing a CheY-like receiver domain and an HD-GYP domain | cofit | 29 | 85 |
| Dechlorosoma suillum PS | Dsui_0919 | | response regulator containing a CheY-like receiver domain and an HD-GYP domain | insig. | 32 | 54 |
| Shewanella sp. ANA-3 | Shewana3_0479 | | response regulator receiver modulated metal dependent phosphohydrolase (RefSeq) | insig. | 32 | 48 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4541 | | Response regulator | insig. | 33 | 53 |
| Acidovorax sp. GW101-3H11 | Ac3H11_4352 | | Response regulator | insig. | 32 | 53 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVUA0086 | | response regulator (TIGR) | sig. | 33 | 53 |
| Azospirillum sp. SherDot2 | MPMX19_05513 | | 3'3'-cGAMP-specific phosphodiesterase 2 | insig. | 32 | 55 |
| Azospirillum brasilense Sp245 | AZOBR_RS00880 | | regulator | sig. | 32 | 54 |
| Azospirillum sp. SherDot2 | MPMX19_04073 | | hypothetical protein | insig. | 33 | 50 |
| Pseudomonas sp. S08-1 | OH686_00410 | | Response regulator c-di-GMP phosphodiesterase, RpfG family | insig. | 31 | 60 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3644 | | Pole remodelling regulatory diguanylate cyclase | insig. | 27 | 89 |
| Shewanella sp. ANA-3 | Shewana3_3334 | | response regulator receiver modulated metal dependent phosphohydrolase (RefSeq) | insig. | 32 | 51 |
| Azospirillum sp. SherDot2 | MPMX19_05749 | | Cyclic di-GMP phosphodiesterase response regulator RpfG | insig. | 32 | 48 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1513 | | metal dependent phosphohydrolase (RefSeq) | insig. | 36 | 37 |
| Shewanella oneidensis MR-1 | SO4003 | | response regulator (NCBI ptt file) | insig. | 30 | 51 |
| Dechlorosoma suillum PS | Dsui_1863 | | response regulator containing a CheY-like receiver domain and an HD-GYP domain | insig. | 35 | 49 |
| Enterobacter sp. TBS_079 | MPMX20_02814 | | hypothetical protein | insig. | 30 | 60 |
| Pseudomonas sp. S08-1 | OH686_23605 | | Response regulator c-di-GMP phosphodiesterase, RpfG family | insig. | 31 | 59 |
| Magnetospirillum magneticum AMB-1 | AMB_RS09305 | | two-component system response regulator | insig. | 31 | 57 |
| Shewanella amazonensis SB2B | Sama_2951 | | response regulator receiver protein (RefSeq) | insig. | 31 | 53 |
| Alteromonas macleodii MIT1002 | MIT1002_01768 | | Cyclic di-GMP phosphodiesterase response regulator RpfG | insig. | 30 | 49 |
| Burkholderia phytofirmans PsJN | BPHYT_RS00885 | | chemotaxis protein CheY | insig. | 32 | 49 |
| Shewanella amazonensis SB2B | Sama_3111 | | response regulator receiver protein (RefSeq) | insig. | 31 | 49 |
| Shewanella sp. ANA-3 | Shewana3_3418 | | response regulator receiver modulated metal dependent phosphohydrolase (RefSeq) | insig. | 30 | 53 |
| Azospirillum brasilense Sp245 | AZOBR_RS23460 | | divalent ion tolerance protein CutA | insig. | 28 | 55 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2418 | | Response regulator | insig. | 29 | 53 |
| Alteromonas macleodii MIT1002 | MIT1002_00763 | | Cyclic di-GMP phosphodiesterase response regulator RpfG | insig. | 33 | 49 |
| Pseudomonas sp. S08-1 | OH686_07455 | | Response regulator c-di-GMP phosphodiesterase, RpfG family | insig. | 31 | 57 |
| Shewanella loihica PV-4 | Shew_3199 | | response regulator receiver modulated metal dependent phosphohydrolase (RefSeq) | insig. | 32 | 49 |
| Azospirillum sp. SherDot2 | MPMX19_06045 | | putative cyclic di-GMP phosphodiesterase | insig. | 30 | 68 |
| Magnetospirillum magneticum AMB-1 | AMB_RS20960 | | two-component system response regulator | cofit | 31 | 58 |
| Shewanella loihica PV-4 | Shew_2713 | | metal dependent phosphohydrolase (RefSeq) | insig. | 35 | 44 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS06195 | | transcriptional regulator | insig. | 30 | 47 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1407 | | metal dependent phosphohydrolase (RefSeq) | insig. | 28 | 51 |
| Rhodospirillum rubrum S1H | Rru_A3180 | | Metal dependent phosphohydrolase, HD region (NCBI) | insig. | 31 | 47 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3602 | | Response regulator | insig. | 32 | 51 |
| Azospirillum brasilense Sp245 | AZOBR_RS26775 | | hisitidine kinase | sig. | 32 | 47 |
| Magnetospirillum magneticum AMB-1 | AMB_RS09310 | | two-component system response regulator | insig. | 30 | 57 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS16755 | | HD-GYP domain-containing protein | insig. | 38 | 44 |
| Shewanella oneidensis MR-1 | SO0860 | | response regulator (NCBI ptt file) | insig. | 29 | 53 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2900.1 | | response regulator | strong | 30 | 53 |
| Alteromonas macleodii MIT1002 | MIT1002_02465 | | Cyclic di-GMP phosphodiesterase response regulator RpfG | insig. | 27 | 58 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2545 | | metal dependent phosphohydrolase (RefSeq) | insig. | 31 | 55 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_15035 | | transcriptional regulator | insig. | 27 | 64 |
| Azospirillum sp. SherDot2 | MPMX19_00086 | | 3'3'-cGAMP-specific phosphodiesterase 2 | insig. | 35 | 43 |
| Lysobacter sp. OAE881 | ABIE51_RS11560 | | two-component system response regulator | strong | 31 | 53 |
| Magnetospirillum magneticum AMB-1 | AMB_RS17390 | | two-component system response regulator | insig. | 30 | 48 |
| Dechlorosoma suillum PS | Dsui_1836 | | response regulator containing a CheY-like receiver domain and an HD-GYP domain | cofit | 30 | 48 |
| Dechlorosoma suillum PS | Dsui_2782 | | response regulator containing a CheY-like receiver domain and an HD-GYP domain | no data | 28 | 48 |
| Shewanella amazonensis SB2B | Sama_3396 | | response regulator receiver protein (RefSeq) | insig. | 31 | 40 |
| Magnetospirillum magneticum AMB-1 | AMB_RS12565 | | HD domain-containing protein | insig. | 32 | 47 |
| Bosea sp. OAE506 | ABIE41_RS11550 | | HD domain-containing phosphohydrolase | insig. | 29 | 49 |
| Dechlorosoma suillum PS | Dsui_1886 | | response regulator containing a CheY-like receiver domain and an HD-GYP domain | cofit | 30 | 56 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_07645 | | Phosphohydrolase | insig. | 28 | 56 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0722 | | response regulator (TIGR) | insig. | 27 | 54 |
| Azospirillum sp. SherDot2 | MPMX19_01880 | | hypothetical protein | insig. | 35 | 38 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS21195 | | phosphohydrolase | insig. | 32 | 36 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2188.1 | | two-component system regulatory protein | insig. | 32 | 45 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS01775 | | HD-GYP domain-containing protein | insig. | 34 | 35 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_11855 | | HD-GYP domain-containing protein | insig. | 33 | 32 |
| Dechlorosoma suillum PS | Dsui_0938 | | HD-GYP domain-containing protein | insig. | 30 | 62 |
| Dechlorosoma suillum PS | Dsui_1868 | | HD-GYP domain-containing protein | insig. | 34 | 38 |
| Shewanella amazonensis SB2B | Sama_1789 | | response regulator receiver protein (RefSeq) | insig. | 26 | 59 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3168 | | Response regulator | insig. | 30 | 44 |
| Dechlorosoma suillum PS | Dsui_1228 | | response regulator containing a CheY-like receiver domain and an HD-GYP domain | insig. | 34 | 33 |
| Rhodanobacter denitrificans MT42 | LRK55_RS17470 | | HD domain-containing phosphohydrolase | cofit | 32 | 37 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS17245 | | HD domain-containing protein | insig. | 32 | 37 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1148 | | metal dependent phosphohydrolase | insig. | 28 | 48 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU1181 | | response regulator (TIGR) | cofit | 27 | 51 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU3123 | | HD domain protein (TIGR) | insig. | 28 | 48 |
| Dechlorosoma suillum PS | Dsui_3001 | | putative domain HDIG-containing protein | insig. | 26 | 69 |
| Dechlorosoma suillum PS | Dsui_2629 | | HD-GYP domain-containing protein | cofit | 33 | 36 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_05340 | | HD-GYP domain-containing protein | insig. | 32 | 35 |
| Alteromonas macleodii MIT1002 | MIT1002_01516 | | Cyclic di-GMP phosphodiesterase response regulator RpfG | insig. | 30 | 47 |
| Shewanella sp. ANA-3 | Shewana3_2820 | | metal dependent phosphohydrolase (RefSeq) | insig. | 27 | 47 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS00610 | | HD-GYP domain-containing protein | insig. | 30 | 40 |
| Marinobacter adhaerens HP15 | HP15_3532 | | Metal-dependent phosphohydrolase, HD subdomain protein | insig. | 31 | 36 |
| Pseudomonas sp. RS175 | PFR28_01424 | | Cyclic di-GMP phosphodiesterase | insig. | 32 | 38 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_29890 | | phosphodiesterase | insig. | 29 | 43 |
| Pantoea sp. MT58 | IAI47_01225 | | HD-GYP domain-containing protein | insig. | 28 | 53 |
| Marinobacter adhaerens HP15 | HP15_4049 | | HD-GYP domain protein | insig. | 32 | 37 |
| Marinobacter adhaerens HP15 | HP15_p187g147 | | HD-GYP domain protein | insig. | 32 | 37 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2933 | | response regulator/sensory box/HDIG domain protein (TIGR) | strong | 30 | 51 |
| Castellaniella sp019104865 MT123 | ABCV34_RS14075 | | HD-GYP domain-containing protein | cofit | 30 | 45 |