Homologs of Shew_3227 from Shewanella loihica PV-4

diguanylate cyclase/phosphodiesterase (RefSeq)
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_3227 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 100 100
o Shewanella amazonensis SB2B Sama_0572 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 53 98
o Alteromonas macleodii MIT1002 MIT1002_00062 Bacteriophytochrome cph2 insig. 30 97
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 43 51
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 43 51
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 42 52
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1728 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 54
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 53
  Pseudomonas fluorescens FW300-N2E3 AO353_23975 diguanylate cyclase strong 41 54
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 41 52
  Acidovorax sp. GW101-3H11 Ac3H11_1143 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 42 52
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4868 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 55
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 40 53
  Dechlorosoma suillum PS Dsui_2394 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 40 57
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 41 52
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 40 53
  Cupriavidus basilensis FW507-4G11 RR42_RS09980 diguanylate phosphodiesterase insig. 40 54
  Pseudomonas sp. S08-1 OH686_11085 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 52
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 42 51
  Sinorhizobium meliloti 1021 SMc00038 hypothetical protein insig. 42 53
  Caulobacter crescentus NA1000 CCNA_03191 PAS-family GGDEF/EAL family protein cofit 40 55
  Caulobacter crescentus NA1000 Δfur CCNA_03191 PAS-family GGDEF/EAL family protein cofit 40 55
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 40 52
  Pseudomonas sp. RS175 PFR28_03484 hypothetical protein strong 38 54
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 42 51
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 42 51
  Pseudomonas simiae WCS417 PS417_00920 diguanylate cyclase strong 40 52
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 42 51
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 40 51
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 51
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 50
  Magnetospirillum magneticum AMB-1 AMB_RS23225 GGDEF domain-containing protein insig. 39 52
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 40 54
  Pseudomonas fluorescens SBW25 PFLU_RS16810 EAL domain-containing protein insig. 39 55
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16810 EAL domain-containing protein insig. 39 55
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 42 51
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2728 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 52
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 42 51
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 41 51
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4009 GGDEF domain protein strong 41 52
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 41 51
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5465 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 53
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 42 51
  Pseudomonas fluorescens FW300-N2C3 AO356_17705 diguanylate cyclase insig. 38 53
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 42 51
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 53
  Pseudomonas fluorescens FW300-N2C3 AO356_10695 diguanylate cyclase strong 41 52
  Rhodospirillum rubrum S1H Rru_A3137 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 41 53
  Ralstonia sp. UNC404CL21Col ABZR87_RS17290 EAL domain-containing protein strong 41 54
  Shewanella sp. ANA-3 Shewana3_1464 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 39 53
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1729 GGDEF domain protein insig. 41 52
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 42 51
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 42 51
  Desulfovibrio vulgaris Hildenborough JW710 DVU2432 sensory box/GGDEF domain/EAL domain protein (TIGR) insig. 39 56
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 52
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 53
  Pseudomonas simiae WCS417 PS417_14800 diguanylate cyclase insig. 39 54
  Herbaspirillum seropedicae SmR1 HSERO_RS12780 diguanylate phosphodiesterase sig. 42 52
  Ralstonia solanacearum PSI07 RPSI07_RS00975 sensor domain-containing diguanylate cyclase cofit 41 52
  Pseudomonas sp. RS175 PFR28_04760 hypothetical protein strong 41 52
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS22225 sensor domain-containing diguanylate cyclase cofit 41 52
  Ralstonia solanacearum UW163 UW163_RS22770 sensor domain-containing diguanylate cyclase insig. 41 52
  Ralstonia solanacearum GMI1000 RS_RS18380 sensor domain-containing diguanylate cyclase strong 40 53
  Azospirillum brasilense Sp245 AZOBR_RS30720 diguanylate cyclase insig. 40 52
  Pseudomonas fluorescens FW300-N2E3 AO353_17145 diguanylate phosphodiesterase insig. 39 54
  Dechlorosoma suillum PS Dsui_3161 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein sig. 40 51
  Azospirillum brasilense Sp245 AZOBR_RS19995 Diguanylate cyclase/phosphodiesterase with PAS/PAC domain strong 39 52
  Azospirillum sp. SherDot2 MPMX19_04641 hypothetical protein insig. 40 51
  Pseudomonas sp. S08-1 OH686_06280 Sensory box/GGDEF family protein insig. 40 52
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 41 51
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 41 51
  Pseudomonas fluorescens SBW25 PFLU_RS00935 EAL domain-containing protein cofit 39 53
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00935 EAL domain-containing protein strong 39 53
  Pseudomonas sp. S08-1 OH686_03710 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 41 51
  Shewanella loihica PV-4 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 40 52
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04630 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 40 53
  Marinobacter adhaerens HP15 HP15_3533 response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 53
  Magnetospirillum magneticum AMB-1 AMB_RS21020 bifunctional diguanylate cyclase/phosphodiesterase insig. 40 50
  Acidovorax sp. GW101-3H11 Ac3H11_4997 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 51
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 40 52
  Pseudomonas fluorescens GW456-L13 PfGW456L13_490 GGDEF domain protein insig. 42 51
  Burkholderia phytofirmans PsJN BPHYT_RS03250 diguanylate cyclase insig. 40 53
  Desulfovibrio vulgaris Miyazaki F DvMF_0211 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) sig. 40 51
  Pseudomonas fluorescens FW300-N2E3 AO353_11530 diguanylate cyclase strong 40 51
  Pseudomonas simiae WCS417 PS417_05435 diguanylate cyclase insig. 35 58
  Burkholderia phytofirmans PsJN BPHYT_RS33250 diguanylate phosphodiesterase insig. 41 52
  Marinobacter adhaerens HP15 HP15_806 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 39 51
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 38 54
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 40 52
  Desulfovibrio vulgaris Miyazaki F DvMF_2963 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 39 51
  Dechlorosoma suillum PS Dsui_0506 diguanylate cyclase (GGDEF) domain-containing protein cofit 40 51
  Pseudomonas sp. S08-1 OH686_19830 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 53
  Variovorax sp. SCN45 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 41 50
  Shewanella oneidensis MR-1 SO3084 sensory box protein (NCBI ptt file) sig. 40 52
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 40 51
  Rhizobium sp. OAE497 ABIE40_RS04625 EAL domain-containing protein cofit 40 54
  Paraburkholderia sabiae LMG 24235 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 53
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 39 51
  Lysobacter sp. OAE881 ABIE51_RS17335 EAL domain-containing protein insig. 39 52
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 38 53