Homologs of Shew_0767 from Shewanella loihica PV-4

ATP-dependent RNA helicase SrmB (RefSeq)
SEED: ATP-dependent RNA helicase SrmB
KEGG: ATP-dependent RNA helicase SrmB

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_0767 ATP-dependent RNA helicase SrmB (RefSeq) strong 100 100
o Shewanella oneidensis MR-1 SO0947 srmB ATP-dependent RNA helicase SrmB (NCBI ptt file) strong 82 92
o Shewanella sp. ANA-3 Shewana3_3336 ATP-dependent RNA helicase SrmB (RefSeq) strong 81 92
  Shewanella amazonensis SB2B Sama_2742 ATP-dependent RNA helicase SrmB (RefSeq) cofit 80 92
o Alteromonas macleodii MIT1002 MIT1002_00941 ATP-dependent RNA helicase SrmB no data 59 91
o Pantoea sp. MT58 IAI47_04835 ATP-dependent RNA helicase SrmB strong 55 96
o Erwinia amylovora T8 OLJFJH_10200 ATP-dependent RNA helicase SrmB strong 54 96
o Pectobacterium carotovorum WPP14 HER17_RS05765 ATP-dependent RNA helicase SrmB cofit 55 95
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS14725 ATP-dependent RNA helicase SrmB strong 54 96
o Serratia liquefaciens MT49 IAI46_19600 ATP-dependent RNA helicase SrmB strong 54 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_03475 ATP-dependent RNA helicase SrmB cofit 57 90
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_01260 srmB ATP-dependent RNA helicase SrmB strong 54 96
o Erwinia tracheiphila SCR3 LU632_RS15440 srmB ATP-dependent RNA helicase SrmB cofit 54 96
o Klebsiella michiganensis M5al BWI76_RS21370 ATP-dependent RNA helicase SrmB insig. 56 94
o Rahnella sp. WP5 EX31_RS21785 ATP-dependent RNA helicase SrmB cofit 53 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2104 ATP-dependent RNA helicase SrmB insig. 56 94
o Klebsiella pneumoniae MKP103 KDGMDA_28495 ATP-dependent RNA helicase SrmB cofit 58 92
o Enterobacter sp. TBS_079 MPMX20_03447 ATP-dependent RNA helicase SrmB strong 55 95
o Enterobacter asburiae PDN3 EX28DRAFT_0069 Superfamily II DNA and RNA helicases insig. 55 95
o Escherichia coli ECRC62 BNILDI_11835 srmB ATP-dependent RNA helicase SrmB cofit 57 91
o Escherichia coli BW25113 b2576 srmB ATP-dependent RNA helicase (NCBI) strong 57 91
o Escherichia coli BL21 ECD_02470 ATP-dependent RNA helicase strong 57 91
o Escherichia fergusonii Becca EFB2_01320 ATP-dependent RNA helicase SrmB strong 57 91
o Escherichia coli ECOR27 NOLOHH_13035 srmB ATP-dependent RNA helicase SrmB strong 57 91
o Escherichia coli ECOR38 HEPCGN_20505 srmB ATP-dependent RNA helicase SrmB strong 57 91
o Escherichia coli ECRC100 OKFHMN_21360 srmB ATP-dependent RNA helicase SrmB cofit 57 91
o Escherichia coli ECRC101 MCAODC_11890 srmB ATP-dependent RNA helicase SrmB strong 57 91
o Escherichia coli ECRC102 NIAGMN_19130 srmB ATP-dependent RNA helicase SrmB cofit 57 91
o Escherichia coli ECRC98 JDDGAC_25025 srmB ATP-dependent RNA helicase SrmB strong 57 91
o Escherichia coli ECRC99 KEDOAH_06860 srmB ATP-dependent RNA helicase SrmB no data 57 91
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01131 ATP-dependent RNA helicase SrmB strong 57 91
o Escherichia coli Nissle 1917 ECOLIN_RS14580 ATP-dependent RNA helicase SrmB sig. 57 91
o Dickeya dadantii 3937 DDA3937_RS15780 ATP-dependent RNA helicase SrmB strong 54 95
o Dickeya dianthicola ME23 DZA65_RS16945 ATP-dependent RNA helicase SrmB cofit 53 97
o Dickeya dianthicola 67-19 HGI48_RS15865 ATP-dependent RNA helicase SrmB cofit 53 97
  Methylophilus sp. DMC18 GFF1281 ATP-dependent RNA helicase RhlE cofit 43 97
  Pseudomonas aeruginosa PA14 IKLFDK_20375 DEAD/DEAH box helicase insig. 45 91
  Kangiella aquimarina DSM 16071 B158DRAFT_0320 Superfamily II DNA and RNA helicases insig. 43 92
  Herbaspirillum seropedicae SmR1 HSERO_RS17155 RNA helicase insig. 39 97
  Azospirillum sp. SherDot2 MPMX19_02011 RNA helicase CrhR strong 45 90
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 42 91
  Marinobacter adhaerens HP15 HP15_2099 DEAD/DEAH box helicase domain protein sig. 42 90
  Azospirillum sp. SherDot2 MPMX19_06125 RNA helicase CrhR insig. 44 90
  Pseudomonas sp. RS175 PFR28_00756 ATP-dependent RNA helicase RhlE insig. 41 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_543 ATP-dependent RNA helicase SrmB no data 42 94
  Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 40 95
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05046 ATP-dependent RNA helicase RhlE cofit 42 91
  Pseudomonas simiae WCS417 PS417_20275 RNA helicase no data 42 94
  Pseudomonas simiae WCS417 PS417_24500 DEAD/DEAH box helicase strong 42 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4451 ATP-dependent RNA helicase SrmB strong 41 94
  Pseudomonas fluorescens FW300-N2C3 AO356_04210 RNA helicase no data 41 94
  Shewanella oneidensis MR-1 SO2838 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 41 95
  Pseudomonas segetis P6 MPMX49_01098 ATP-dependent RNA helicase RhlE sig. 42 91
  Pseudomonas sp. DMC3 GFF2355 ATP-dependent RNA helicase RhlE no data 41 94
  Pseudomonas putida KT2440 PP_4766 ATP-dependent RNA helicase strong 42 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1409 ATP-dependent RNA helicase PA3950 insig. 42 91
  Pseudomonas fluorescens SBW25 PFLU_RS22195 DEAD/DEAH box helicase strong 42 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22195 DEAD/DEAH box helicase strong 42 94
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04249 ATP-dependent RNA helicase RhlE insig. 42 94
  Pseudomonas fluorescens SBW25 PFLU_RS26425 DEAD/DEAH box helicase insig. 42 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26425 DEAD/DEAH box helicase sig. 42 91
  Marinobacter adhaerens HP15 HP15_3607 DEAD/DEAH box helicase domain protein insig. 41 94
  Shewanella loihica PV-4 Shew_2452 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 40 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2675 ATP-dependent RNA helicase SrmB insig. 41 94
  Pseudomonas sp. BP01 JOY50_RS21825 DEAD/DEAH box helicase insig. 42 91
  Pseudomonas sp. DMC3 GFF3924 ATP-dependent RNA helicase RhlE cofit 41 91
  Pseudomonas fluorescens FW300-N2E3 AO353_18305 RNA helicase sig. 41 94
  Shewanella loihica PV-4 Shew_0604 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 40 95
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2736 ATP-dependent RNA helicase PA3950 sig. 41 91
  Pseudomonas sp. RS175 PFR28_03825 ATP-dependent RNA helicase RhlE insig. 41 91
  Magnetospirillum magneticum AMB-1 AMB_RS07215 ATP-dependent helicase insig. 44 90
  Paraburkholderia graminis OAS925 ABIE53_005853 ATP-dependent RNA helicase RhlE insig. 43 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5046 ATP-dependent RNA helicase PA3950 strong 41 91
  Shewanella sp. ANA-3 Shewana3_2606 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 41 90
  Kangiella aquimarina DSM 16071 B158DRAFT_1312 Superfamily II DNA and RNA helicases insig. 40 91
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1574 Superfamily II DNA and RNA helicases strong 40 97
  Shewanella sp. ANA-3 Shewana3_2376 DEAD/DEAH box helicase domain-containing protein (RefSeq) cofit 42 90
  Burkholderia phytofirmans PsJN BPHYT_RS35415 DEAD/DEAH box helicase insig. 44 88
  Pseudomonas stutzeri RCH2 Psest_3505 Superfamily II DNA and RNA helicases strong 42 92
  Shewanella oneidensis MR-1 SO2571 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 42 90
  Pseudomonas fluorescens FW300-N2E3 AO353_06265 DEAD/DEAH box helicase strong 41 91
  Burkholderia phytofirmans PsJN BPHYT_RS12280 RNA helicase insig. 40 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS06275 DEAD/DEAH box helicase insig. 40 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS32150 DEAD/DEAH box helicase insig. 45 88
  Bosea sp. OAE506 ABIE41_RS22380 DEAD/DEAH box helicase insig. 43 88
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 41 90
  Pseudomonas fluorescens FW300-N2C3 AO356_15530 DEAD/DEAH box helicase sig. 40 91
  Paraburkholderia graminis OAS925 ABIE53_002535 superfamily II DNA/RNA helicase strong 40 90
  Dechlorosoma suillum PS Dsui_0309 DNA/RNA helicase, superfamily II insig. 43 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 40 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 41 90
  Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 42 90
  Pseudomonas syringae pv. syringae B728a Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal sig. 40 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 40 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00581 Superfamily II DNA and RNA helicase no data 40 90
  Shewanella loihica PV-4 Shew_1884 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 40 97
  Pseudomonas sp. SVBP6 COO64_RS21930 DEAD/DEAH box helicase insig. 40 94
  Pseudomonas syringae pv. syringae B728a Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 41 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal strong 41 91
  Cupriavidus basilensis FW507-4G11 RR42_RS14720 RNA helicase no data 40 90