Homologs of Dshi_1782 from Dinoroseobacter shibae DFL-12

Rieske (2Fe-2S) domain protein (RefSeq)
SEED: GbcA Glycine betaine demethylase subunit A

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dinoroseobacter shibae DFL-12 Dshi_1782 Rieske (2Fe-2S) domain protein (RefSeq) sig. 100 100
o Phaeobacter inhibens DSM 17395 PGA1_262p01370 putative dioxygenase insig. 60 97
o Pseudomonas segetis P6 MPMX49_02427 Carnitine monooxygenase oxygenase subunit insig. 47 97
o Pseudomonas putida KT2440 PP_5373 Rieske 2Fe-2S family protein insig. 45 97
o Caulobacter crescentus NA1000 CCNA_03222 ring hydroxylating dioxygenase, alpha-subunit insig. 32 88
o Caulobacter crescentus NA1000 Δfur CCNA_03222 ring hydroxylating dioxygenase, alpha-subunit cofit 32 88
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS05485 Rieske 2Fe-2S domain-containing protein insig. 32 98
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04520 Rieske 2Fe-2S domain-containing protein insig. 32 98
o Lysobacter sp. OAE881 ABIE51_RS14635 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 29 96
o Rhodanobacter denitrificans MT42 LRK55_RS04295 SRPBCC family protein cofit 32 95
o Rhodanobacter sp. FW510-T8 OKGIIK_11350 (2Fe-2S)-binding protein insig. 31 94
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0537 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit insig. 30 88
o Sphingobium sp. HT1-2 GFF1870 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit cofit 30 91
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS00370 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 30 90
o Paraburkholderia sabiae LMG 24235 QEN71_RS11230 Rieske 2Fe-2S domain-containing protein insig. 31 83
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04945 Phenylpropionate dioxygenase, large terminal subunit insig. 29 97
o Burkholderia phytofirmans PsJN BPHYT_RS11745 (2Fe-2S)-binding protein insig. 29 91
o Paraburkholderia graminis OAS925 ABIE53_001515 choline monooxygenase sig. 30 87
o Ralstonia solanacearum GMI1000 RS_RS17495 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 26 90
o Acinetobacter baumannii LAC-4 RR41_RS15010 Rieske 2Fe-2S domain-containing protein insig. 24 91
o Klebsiella pneumoniae MKP103 KDGMDA_18310 ring-hydroxylating oxygenase subunit alpha insig. 25 87
o Escherichia coli BL21 ECD_01772 putative YeaWX dioxygenase alpha subunit; 2Fe-2S cluster insig. 25 87
o Escherichia coli ECOR27 NOLOHH_17135 yeaW carnitine monooxygenase subunit YeaW sig. 25 87
o Escherichia coli ECOR38 HEPCGN_05005 yeaW carnitine monooxygenase subunit YeaW insig. 25 87
o Escherichia coli ECRC100 OKFHMN_26615 yeaW carnitine monooxygenase subunit YeaW insig. 25 87
o Escherichia coli ECRC101 MCAODC_18795 yeaW carnitine monooxygenase subunit YeaW insig. 25 87
o Escherichia coli ECRC102 NIAGMN_01450 yeaW carnitine monooxygenase subunit YeaW cofit 25 87
o Escherichia coli ECRC62 BNILDI_15920 yeaW carnitine monooxygenase subunit YeaW insig. 25 87
o Escherichia coli ECRC98 JDDGAC_01190 yeaW carnitine monooxygenase subunit YeaW insig. 25 87
o Escherichia coli ECRC99 KEDOAH_01495 yeaW carnitine monooxygenase subunit YeaW no data 25 87
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01931 Carnitine monooxygenase oxygenase subunit cofit 25 87
o Escherichia coli BW25113 b1802 yeaW predicted 2Fe-2S cluster-containing protein (NCBI) insig. 25 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS08345 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 27 90
  Sphingobium sp. HT1-2 GFF2660 hypothetical protein cofit 27 85
o Pseudomonas orientalis W4I3 QF045_RS20420 aromatic ring-hydroxylating dioxygenase subunit alpha cofit 27 88
  Burkholderia phytofirmans PsJN BPHYT_RS25215 (Fe-S)-binding protein no data 26 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02475 Rieske 2Fe-2S family protein sig. 26 93
  Pseudomonas fluorescens FW300-N2C3 AO356_00625 (Fe-S)-binding protein insig. 34 54
o Azospirillum sp. SherDot2 MPMX19_03249 Carnitine monooxygenase oxygenase subunit insig. 27 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS07535 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 29 50
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5547 3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-) insig. 32 49
  Pseudomonas putida KT2440 PP_0315 putative glycine-betaine dioxygenase subunit strong 30 53
o Cupriavidus basilensis FW507-4G11 RR42_RS15020 (2Fe-2S)-binding protein strong 27 94
  Burkholderia phytofirmans PsJN BPHYT_RS10690 Rieske (2Fe-2S) protein insig. 30 50
  Variovorax sp. SCN45 GFF3979 3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-) insig. 35 49
  Pseudomonas aeruginosa MRSN321 DY961_RS25315 gbcA;inference=COORDINATES glycine-betaine demethylase subunit GbcA strong 30 53
  Pseudomonas aeruginosa PA14 IKLFDK_26375 glycine-betaine demethylase subunit GbcA strong 30 53
  Pseudomonas aeruginosa PUPa3 DQ20_RS43615 gbcA;inference=COORDINATES glycine-betaine demethylase subunit GbcA strong 30 53
o Sinorhizobium meliloti 1021 SMa0751 Ring-hydroxylating dioxygenase insig. 25 93
o Pseudomonas sp. BP01 JOY50_RS08050 aromatic ring-hydroxylating dioxygenase subunit alpha no data 24 89
  Pseudomonas sp. BP01 JOY50_RS25635 gbcA glycine-betaine demethylase subunit GbcA insig. 30 53
  Herbaspirillum seropedicae SmR1 HSERO_RS06720 Rieske (2Fe-2S) protein insig. 28 50
  Paraburkholderia graminis OAS925 ABIE53_004546 phenylpropionate dioxygenase-like ring-hydroxylating dioxygenase large terminal subunit strong 29 50
o Acidovorax sp. GW101-3H11 Ac3H11_3563 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit strong 28 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01653 Phenylpropionate dioxygenase, large terminal subunit insig. 29 50
  Azospirillum sp. SherDot2 MPMX19_04718 Carnitine monooxygenase oxygenase subunit cofit 30 51
  Pseudomonas segetis P6 MPMX49_02026 Anthranilate 1,2-dioxygenase large subunit insig. 29 51
  Phaeobacter inhibens DSM 17395 PGA1_c05010 putative dioxygenase insig. 25 93
  Pseudomonas sp. SVBP6 COO64_RS00090 gbcA glycine-betaine demethylase subunit GbcA insig. 29 53
  Variovorax sp. OAS795 ABID97_RS08885 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 34 49
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02017 Anthranilate 1,2-dioxygenase large subunit insig. 29 52
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS03720 aromatic ring-hydroxylating dioxygenase subunit alpha strong 29 92
o Ralstonia solanacearum UW163 UW163_RS09950 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 29 92
  Pseudomonas segetis P6 MPMX49_00708 Carnitine monooxygenase oxygenase subunit sig. 28 53
  Pseudomonas sp. BP01 JOY50_RS28355 benA benzoate 1,2-dioxygenase large subunit no data 26 86
  Pseudomonas putida KT2440 PP_3161 benzoate 1,2-dioxygenase subunit alpha strong 26 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS36330 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 30 56
  Pseudomonas aeruginosa MRSN321 DY961_RS05085 antA;go_function=anthranilate anthranilate 1 2-dioxygenase large subunit sig. 30 55
  Pseudomonas aeruginosa PA14 IKLFDK_12340 anthranilate 1 2-dioxygenase large subunit strong 30 55
  Pseudomonas aeruginosa PUPa3 DQ20_RS35975 antA;go_function=anthranilate anthranilate 1 2-dioxygenase large subunit strong 30 55
  Agrobacterium fabrum C58 Atu0726 ring hydroxylating dioxygenase, alpha-subunit strong 29 52
  Variovorax sp. OAS795 ABID97_RS08840 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 31 49
  Variovorax sp. OAS795 ABID97_RS18645 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 28 52
  Paraburkholderia sabiae LMG 24235 QEN71_RS11020 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 29 53
  Pseudomonas simiae WCS417 PS417_26220 Rieske (2Fe-2S) protein insig. 29 53
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4713 GbcA Glycine betaine demethylase subunit A strong 29 52
  Variovorax sp. SCN45 GFF3970 Ring hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13) insig. 32 49
  Mycobacterium tuberculosis H37Rv Rv3161c Possible dioxygenase strong 32 53
  Pseudomonas syringae pv. syringae B728a Psyr_4776 Rieske [2Fe-2S] region insig. 29 53
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4776 Rieske [2Fe-2S] region insig. 29 53
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03006 Anthranilate 1,2-dioxygenase large subunit cofit 28 52
o Ralstonia sp. UNC404CL21Col ABZR87_RS15650 aromatic ring-hydroxylating dioxygenase subunit alpha cofit 28 92
  Pseudomonas fluorescens FW300-N2C3 AO356_13945 Rieske (2Fe-2S) protein strong 28 52
  Ralstonia solanacearum GMI1000 RS_RS11165 aromatic ring-hydroxylating dioxygenase subunit alpha strong 28 92
  Pseudomonas sp. DMC3 GFF112 Carnitine monooxygenase oxygenase subunit cofit 28 53
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2447 GbcA Glycine betaine demethylase subunit A strong 28 53
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3754 Ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S) protein (EC 1.14.12.18) insig. 28 51
  Pseudomonas fluorescens FW300-N2E3 AO353_19745 Rieske (2Fe-2S) protein insig. 29 51
  Variovorax sp. SCN45 GFF6127 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit strong 29 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1110 GbcA Glycine betaine demethylase subunit A insig. 28 53
o Castellaniella sp019104865 MT123 ABCV34_RS02220 aromatic ring-hydroxylating dioxygenase subunit alpha cofit 29 92
o Ralstonia solanacearum PSI07 RPSI07_RS13510 aromatic ring-hydroxylating dioxygenase subunit alpha strong 28 92
  Pseudomonas fluorescens FW300-N2E3 AO353_07680 Rieske (2Fe-2S) protein strong 28 53
  Pseudomonas orientalis W4I3 QF045_RS25940 anthranilate 1,2-dioxygenase large subunit cofit 26 62
  Pseudomonas fluorescens SBW25 PFLU_RS27865 glycine-betaine demethylase subunit GbcA insig. 28 53
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27865 glycine-betaine demethylase subunit GbcA strong 28 53
  Acinetobacter baumannii LAC-4 RR41_RS13660 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 27 56
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05357 Carnitine monooxygenase oxygenase subunit cofit 28 53
  Pseudomonas orientalis W4I3 QF045_RS00605 glycine-betaine demethylase subunit GbcA insig. 28 53
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2740 Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1) (from data) cofit 27 53