Homologs of SO4693 from Shewanella oneidensis MR-1

multidrug resistance protein, AcrA/AcrE family (NCBI ptt file)
SEED: RND efflux system, membrane fusion protein CmeA
KEGG: membrane fusion protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO4693 multidrug resistance protein, AcrA/AcrE family (NCBI ptt file) strong 100 100
o Shewanella sp. ANA-3 Shewana3_4046 RND family efflux transporter MFP subunit (RefSeq) strong 91 100
o Shewanella loihica PV-4 Shew_0031 RND family efflux transporter MFP subunit (RefSeq) strong 77 100
o Shewanella amazonensis SB2B Sama_3553 multidrug resistance protein AcrA/AcrE family (RefSeq) strong 75 100
o Pseudomonas syringae pv. syringae B728a Psyr_4007 Secretion protein HlyD strong 52 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4007 Secretion protein HlyD insig. 52 98
o Erwinia tracheiphila SCR3 LU632_RS18180 efflux RND transporter periplasmic adaptor subunit no data 49 99
o Rahnella sp. WP5 EX31_RS22475 efflux RND transporter periplasmic adaptor subunit cofit 53 95
o Methylophilus sp. DMC18 GFF2594 Multidrug resistance protein MexA insig. 52 89
o Rhodospirillum rubrum S1H Rru_A2050 Secretion protein HlyD (NCBI) insig. 52 95
o Desulfovibrio vulgaris Hildenborough JW710 DVU2817 acrA multidrug resistance protein (TIGR) insig. 54 97
o Enterobacter sp. TBS_079 MPMX20_01065 Multidrug efflux pump subunit AcrA strong 52 95
o Pantoea sp. MT58 IAI47_14510 efflux RND transporter periplasmic adaptor subunit cofit 49 96
o Dickeya dadantii 3937 DDA3937_RS05740 efflux RND transporter periplasmic adaptor subunit strong 49 97
o Herbaspirillum seropedicae SmR1 HSERO_RS23060 hemolysin D insig. 50 98
  Enterobacter sp. TBS_079 MPMX20_04174 Multidrug export protein AcrE insig. 50 96
o Enterobacter asburiae PDN3 EX28DRAFT_2495 RND family efflux transporter, MFP subunit cofit 53 95
o Pseudomonas stutzeri RCH2 Psest_0309 RND family efflux transporter, MFP subunit sig. 51 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1793.1 RND efflux system, membrane fusion protein CmeA insig. 53 86
o Klebsiella michiganensis M5al BWI76_RS06780 MexE family multidrug efflux RND transporter periplasmic adaptor subunit strong 51 95
o Erwinia amylovora T8 OLJFJH_17850 efflux transporter periplasmic adaptor subunit strong 49 98
  Klebsiella michiganensis M5al BWI76_RS25580 MexX family efflux pump subunit insig. 50 96
  Herbaspirillum seropedicae SmR1 HSERO_RS06810 hemolysin D insig. 53 89
  Enterobacter asburiae PDN3 EX28DRAFT_3318 RND family efflux transporter, MFP subunit insig. 50 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2823 Multidrug efflux RND membrane fusion protein MexC strong 50 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_221 RND efflux system, membrane fusion protein CmeA insig. 49 94
o Pseudomonas sp. RS175 PFR28_00632 putative efflux pump periplasmic linker TtgA strong 50 96
o Escherichia fergusonii Becca EFB2_00559 Multidrug export protein AcrE insig. 50 95
o Dickeya dianthicola 67-19 HGI48_RS05795 efflux RND transporter periplasmic adaptor subunit cofit 49 95
o Dickeya dianthicola ME23 DZA65_RS06120 efflux RND transporter periplasmic adaptor subunit strong 49 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS19790 efflux RND transporter periplasmic adaptor subunit cofit 54 87
o Ralstonia solanacearum UW163 UW163_RS19385 efflux RND transporter periplasmic adaptor subunit insig. 54 87
o Serratia liquefaciens MT49 IAI46_12715 efflux RND transporter periplasmic adaptor subunit insig. 53 92
  Serratia liquefaciens MT49 IAI46_05190 multidrug efflux RND transporter periplasmic adaptor subunit SdeX insig. 50 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2117 RND efflux system, membrane fusion protein CmeA insig. 52 95
o Pseudomonas fluorescens FW300-N2C3 AO356_04875 antibiotic transporter strong 50 96
  Escherichia fergusonii Becca EFB2_03595 Multidrug efflux pump subunit AcrA insig. 50 98
o Escherichia coli ECOR38 HEPCGN_06815 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA strong 50 98
o Escherichia coli Nissle 1917 ECOLIN_RS02755 multidrug efflux RND transporter periplasmic adaptor subunit AcrA no data 50 98
o Pseudomonas aeruginosa PA14 IKLFDK_23295 multidrug efflux RND transporter periplasmic adaptor subunit MexA cofit 52 88
o Escherichia coli BL21 ECD_00414 multidrug efflux system strong 50 98
o Escherichia coli ECOR27 NOLOHH_01135 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA cofit 50 98
o Escherichia coli ECRC100 OKFHMN_08200 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA cofit 50 98
o Escherichia coli ECRC101 MCAODC_27425 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA cofit 50 98
o Escherichia coli ECRC102 NIAGMN_06255 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA insig. 50 98
o Escherichia coli ECRC62 BNILDI_22550 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA cofit 50 98
o Escherichia coli ECRC98 JDDGAC_11850 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA cofit 50 98
o Escherichia coli ECRC99 KEDOAH_19765 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA no data 50 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03211 Multidrug efflux pump subunit AcrA cofit 50 98
o Escherichia coli BW25113 b0463 acrA multidrug efflux system (NCBI) strong 50 98
o Pseudomonas simiae WCS417 PS417_06775 antibiotic transporter strong 50 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS18280 efflux RND transporter periplasmic adaptor subunit insig. 51 86
o Pseudomonas fluorescens SBW25 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit cofit 48 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit strong 48 96
  Escherichia coli Nissle 1917 ECOLIN_RS18750 multidrug efflux RND transporter periplasmic adaptor subunit AcrE insig. 50 95
  Escherichia coli ECOR38 HEPCGN_16480 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE insig. 50 95
o Azospirillum sp. SherDot2 MPMX19_05883 Multidrug resistance protein MexA insig. 46 97
o Pseudomonas sp. BP01 JOY50_RS14450 ttgA toluene efflux RND transporter periplasmic adaptor subunit TtgA cofit 47 98
  Pseudomonas fluorescens FW300-N2C3 AO356_00700 hemolysin D insig. 52 89
  Escherichia coli ECOR27 NOLOHH_09445 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE cofit 50 95
  Escherichia coli ECRC62 BNILDI_02075 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE insig. 50 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00440 Multidrug export protein AcrE insig. 50 95
  Escherichia coli BW25113 b3265 acrE cytoplasmic membrane lipoprotein (NCBI) insig. 50 95
o Pseudomonas sp. S08-1 OH686_16045 Multidrug efflux system, membrane fusion component cofit 49 96
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19185 efflux RND transporter periplasmic adaptor subunit strong 49 96
o Pseudomonas putida KT2440 PP_1386 Probable efflux pump periplasmic linker TtgA strong 47 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4380 Membrane fusion protein of RND family multidrug efflux pump sig. 53 90
  Escherichia coli ECRC100 OKFHMN_17660 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE cofit 49 95
  Escherichia coli ECRC101 MCAODC_08180 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE insig. 49 95
  Escherichia coli ECRC102 NIAGMN_15420 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE insig. 49 95
  Escherichia coli ECRC98 JDDGAC_21285 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE cofit 49 95
  Escherichia coli ECRC99 KEDOAH_10490 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE no data 49 95
  Escherichia coli BL21 ECD_03123 cytoplasmic membrane lipoprotein insig. 49 95
o Rhodopseudomonas palustris CGA009 TX73_012250 efflux RND transporter periplasmic adaptor subunit insig. 49 91
  Herbaspirillum seropedicae SmR1 HSERO_RS02415 hemolysin D strong 50 96
o Ralstonia solanacearum GMI1000 RS_RS21035 efflux RND transporter periplasmic adaptor subunit insig. 53 87
o Pectobacterium carotovorum WPP14 HER17_RS15735 efflux RND transporter periplasmic adaptor subunit cofit 51 90
o Ralstonia solanacearum PSI07 RPSI07_RS03395 efflux RND transporter periplasmic adaptor subunit insig. 53 87
o Acinetobacter radioresistens SK82 MPMX26_00690 Multidrug efflux pump subunit AcrA strong 48 96
o Caulobacter crescentus NA1000 CCNA_00851 periplasmic multidrug efflux lipoprotein precursor strong 51 96
o Caulobacter crescentus NA1000 Δfur CCNA_00851 periplasmic multidrug efflux lipoprotein precursor cofit 51 96
  Escherichia coli Nissle 1917 ECOLIN_RS20100 multidrug transporter subunit MdtE insig. 47 95
  Escherichia fergusonii Becca EFB2_00295 Multidrug resistance protein MdtE insig. 46 99
  Pseudomonas simiae WCS417 PS417_18290 hemolysin D insig. 49 95
o Azospirillum brasilense Sp245 AZOBR_RS30180 hemolysin D insig. 48 96
  Escherichia coli BL21 ECD_03361 anaerobic multidrug efflux transporter, ArcA-regulated insig. 46 98
  Escherichia coli ECOR27 NOLOHH_08245 mdtE multidrug transporter subunit MdtE insig. 46 98
  Escherichia coli ECOR38 HEPCGN_15185 mdtE multidrug transporter subunit MdtE insig. 46 98
  Escherichia coli ECRC62 BNILDI_03310 mdtE multidrug transporter subunit MdtE cofit 46 98
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00189 Multidrug resistance protein MdtE insig. 46 98
  Escherichia coli BW25113 b3513 mdtE multidrug resistance efflux transporter (NCBI) insig. 46 98
o Cupriavidus basilensis FW507-4G11 RR42_RS32415 hemolysin D insig. 47 97
  Escherichia coli ECRC100 OKFHMN_16280 mdtE multidrug transporter subunit MdtE insig. 46 98
  Escherichia coli ECRC101 MCAODC_06795 mdtE multidrug transporter subunit MdtE insig. 46 98
  Escherichia coli ECRC102 NIAGMN_14045 mdtE multidrug transporter subunit MdtE insig. 46 98
  Escherichia coli ECRC98 JDDGAC_19910 mdtE multidrug transporter subunit MdtE cofit 46 98
  Escherichia coli ECRC99 KEDOAH_11865 mdtE multidrug transporter subunit MdtE no data 46 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3247 Multidrug efflux RND membrane fusion protein MexC no data 49 96
o Pseudomonas sp. SVBP6 COO64_RS26270 efflux RND transporter periplasmic adaptor subunit insig. 46 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS29870 efflux RND transporter periplasmic adaptor subunit insig. 49 95