Homologs of SO0796 from Shewanella oneidensis MR-1

GGDEF family protein (NCBI ptt file)
SEED: GGDEF family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO0796 GGDEF family protein (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_3488 diguanylate cyclase (RefSeq) cofit 82 100
o Shewanella loihica PV-4 Shew_2545 diguanylate cyclase (RefSeq) insig. 63 98
  Desulfovibrio vulgaris Miyazaki F DvMF_2350 diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) insig. 39 68
o Vibrio cholerae E7946 ATCC 55056 CSW01_05235 GGDEF domain-containing protein cofit 29 98
  Pseudomonas aeruginosa MRSN321 DY961_RS02640 GGDEF domain-containing protein insig. 41 66
  Pseudomonas aeruginosa PUPa3 DQ20_RS32955 GGDEF domain-containing protein insig. 41 66
  Pseudomonas aeruginosa PA14 IKLFDK_14585 GGDEF domain-containing protein insig. 41 66
  Desulfovibrio vulgaris Hildenborough JW710 DVU3068 GAF domain/sensory box/EAL domain protein (TIGR) insig. 39 65
  Pseudomonas sp. RS175 PFR28_02096 hypothetical protein insig. 40 58
  Magnetospirillum magneticum AMB-1 AMB_RS23665 GGDEF domain-containing protein insig. 37 72
  Marinobacter adhaerens HP15 HP15_p187g173 protein containing diguanylate cyclase, predicted domains insig. 34 69
  Azospirillum sp. SherDot2 MPMX19_03993 hypothetical protein insig. 38 60
  Rhodospirillum rubrum S1H Rru_A1908 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation (NCBI) insig. 40 66
  Pseudomonas stutzeri RCH2 Psest_2106 diguanylate cyclase (GGDEF) domain sig. 38 58
  Pseudomonas orientalis W4I3 QF045_RS03980 sensor domain-containing diguanylate cyclase cofit 38 61
  Pseudomonas stutzeri RCH2 Psest_0767 diguanylate cyclase (GGDEF) domain sig. 40 57
  Marinobacter adhaerens HP15 HP15_2378 sensory box/GGDEF family protein insig. 38 55
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00405 hypothetical protein cofit 37 62
  Methylophilus sp. DMC18 GFF1453 hypothetical protein insig. 35 67
  Sinorhizobium meliloti 1021 SMc01370 response regulator PleD insig. 37 70
  Dickeya dadantii 3937 DDA3937_RS06830 diguanylate cyclase insig. 39 53
  Pseudomonas fluorescens SBW25 PFLU_RS00925 sensor domain-containing diguanylate cyclase insig. 38 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00925 sensor domain-containing diguanylate cyclase sig. 38 62
  Dechlorosoma suillum PS Dsui_2953 diguanylate cyclase (GGDEF) domain-containing protein cofit 44 55
  Pseudomonas fluorescens FW300-N2C3 AO356_24210 diguanylate cyclase sig. 39 58
  Pseudomonas sp. S08-1 OH686_03265 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 38 58
  Rhodopseudomonas palustris CGA009 TX73_012800 GGDEF domain-containing protein insig. 40 55
  Pseudomonas segetis P6 ACVTMO_RS22305 diguanylate cyclase sig. 38 69
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1642 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 38 58
  Pseudomonas sp. RS175 PFR28_00898 hypothetical protein cofit 43 51
  Pseudomonas sp. RS175 PFR28_04429 hypothetical protein insig. 40 52
  Pseudomonas segetis P6 ACVTMO_RS21215 histidine kinase N-terminal 7TM domain-containing diguanylate cyclase insig. 38 56
  Pseudomonas simiae WCS417 PS417_00910 diguanylate cyclase insig. 35 62
  Pseudomonas simiae WCS417 PS417_00435 DeoR faimly transcriptional regulator insig. 42 56
  Azospirillum brasilense Sp245 AZOBR_RS10245 diguanylate cyclase sig. 35 61
  Pseudomonas orientalis W4I3 QF045_RS07670 sensor domain-containing diguanylate cyclase insig. 39 57
  Acidovorax sp. GW101-3H11 Ac3H11_3345 hypothetical protein insig. 40 61
  Pseudomonas syringae pv. syringae B728a Psyr_3653 GGDEF domain protein insig. 39 51
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3653 GGDEF domain protein insig. 39 51
  Rhodopseudomonas palustris CGA009 TX73_016195 PleD family two-component system response regulator insig. 39 55
  Pseudomonas sp. SVBP6 COO64_RS12490 sensor domain-containing diguanylate cyclase insig. 36 62
  Pseudomonas sp. DMC3 GFF4253 hypothetical protein insig. 35 60
  Bosea sp. OAE506 ABIE41_RS24040 EAL domain-containing protein strong 34 65
  Kangiella aquimarina DSM 16071 B158DRAFT_0300 diguanylate cyclase (GGDEF) domain insig. 41 54
  Azospirillum sp. SherDot2 MPMX19_01660 Response regulator PleD insig. 38 59
  Desulfovibrio vulgaris Hildenborough JW710 DVU0940 pleD GGDEF domain protein (TIGR) sig. 41 55
  Shewanella sp. ANA-3 Shewana3_0269 diguanylate cyclase (RefSeq) cofit 40 55
  Methylophilus sp. DMC18 GFF1420 hypothetical protein cofit 39 57
  Pseudomonas fluorescens FW300-N2C3 AO356_21390 histidine kinase insig. 32 96
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04054 hypothetical protein cofit 43 51
  Pseudomonas fluorescens SBW25 PFLU_RS00425 diguanylate cyclase cofit 41 57
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00425 diguanylate cyclase sig. 41 57
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00290 hypothetical protein insig. 41 57
  Enterobacter sp. TBS_079 MPMX20_00951 hypothetical protein insig. 40 52
  Rhodanobacter sp. FW510-T8 OKGIIK_13465 gGDEF GGDEF domain-containing protein insig. 39 59
  Sphingobium sp. HT1-2 GFF2539 hypothetical protein cofit 39 56
  Dechlorosoma suillum PS Dsui_0970 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 57
  Pseudomonas fluorescens GW456-L13 PfGW456L13_492 Sensory box/GGDEF family protein insig. 35 60
  Bosea sp. OAE506 ABIE41_RS18170 PleD family two-component system response regulator insig. 33 79
  Pseudomonas fluorescens FW300-N2E3 AO353_20610 histidine kinase insig. 32 96
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16460 GGDEF domain-containing protein insig. 38 54
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03950 hypothetical protein cofit 32 96
  Rhodanobacter denitrificans MT42 LRK55_RS10100 GGDEF domain-containing protein insig. 39 59
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10460 GGDEF domain-containing protein insig. 39 59
  Pseudomonas simiae WCS417 PS417_18610 histidine kinase sig. 34 96
  Shewanella sp. ANA-3 Shewana3_3733 diguanylate cyclase (RefSeq) sig. 40 56
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2528 GGDEF domain protein insig. 42 51
  Shewanella oneidensis MR-1 SO4457 GGDEF domain protein (NCBI ptt file) insig. 39 55
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_60 Sensory box/GGDEF family protein insig. 33 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_359 GGDEF domain protein insig. 41 51
  Magnetospirillum magneticum AMB-1 AMB_RS06820 GGDEF domain-containing protein cofit 40 56
  Ralstonia sp. UNC404CL21Col ABZR87_RS17590 sensor domain-containing diguanylate cyclase insig. 38 58
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4011 Sensory box/GGDEF family protein insig. 34 60
  Paraburkholderia sabiae LMG 24235 QEN71_RS14650 diguanylate cyclase no data 40 55
  Rhodospirillum rubrum S1H Rru_A2567 Putative diguanylate cyclase (GGDEF domain) (NCBI) cofit 37 56
  Pseudomonas syringae pv. syringae B728a Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 36 58
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 36 58
  Pseudomonas fluorescens SBW25 PFLU_RS20590 EAL domain-containing protein insig. 33 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20590 EAL domain-containing protein insig. 33 96
  Marinobacter adhaerens HP15 HP15_4052 response regulator insig. 33 65
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_17 Sensory box/GGDEF family protein insig. 31 96
  Pseudomonas fluorescens FW300-N2C3 AO356_03505 hypothetical protein insig. 42 51
  Paraburkholderia sabiae LMG 24235 QEN71_RS10075 diguanylate cyclase insig. 41 55
  Magnetospirillum magneticum AMB-1 AMB_RS21975 GGDEF domain-containing protein cofit 38 64
  Pseudomonas orientalis W4I3 QF045_RS20750 PAS domain S-box protein insig. 32 96
  Marinobacter adhaerens HP15 HP15_3803 GGDEF domain-like protein insig. 30 85
  Variovorax sp. SCN45 GFF1364 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 52
  Pseudomonas sp. RS175 PFR28_04758 hypothetical protein insig. 35 60
  Pseudomonas putida KT2440 PP_2097 Sensory box protein insig. 35 61
  Shewanella amazonensis SB2B Sama_3137 response regulator receiver protein (RefSeq) strong 35 59
  Pseudomonas fluorescens FW300-N2C3 AO356_10705 diguanylate cyclase insig. 34 60
  Synechococcus elongatus PCC 7942 Synpcc7942_1811 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor sig. 32 60
  Desulfovibrio vulgaris Miyazaki F DvMF_0509 diguanylate cyclase (RefSeq) insig. 42 55
  Shewanella amazonensis SB2B Sama_0530 response regulator receiver protein (RefSeq) cofit 40 58
  Shewanella amazonensis SB2B Sama_3210 GGDEF domain-containing protein (RefSeq) strong 39 55
  Magnetospirillum magneticum AMB-1 AMB_RS23160 PAS domain S-box protein insig. 38 55
  Marinobacter adhaerens HP15 HP15_611 diguanylate cyclase insig. 37 51
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3950 Sensory box/GGDEF family protein insig. 31 96
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0187 diguanylate cyclase (GGDEF) domain insig. 39 59