Homologs of hsdS-1 from Shewanella oneidensis MR-1

hsdS-1: type I restriction-modification system, S subunit (NCBI ptt file)
SEED: Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)
KEGG: type I restriction enzyme, S subunit

97 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO0382 hsdS-1 type I restriction-modification system, S subunit (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_3793 restriction modification system DNA specificity subunit (RefSeq) insig. 38 82
o Desulfovibrio vulgaris Hildenborough JW710 DVU1705 type I restriction-modification enzyme, S subunit (TIGR) insig. 30 97
o Dickeya dianthicola ME23 DZA65_RS04765 restriction endonuclease subunit S insig. 26 97
o Phaeobacter inhibens DSM 17395 PGA1_c30700 putative type I restriction-modification system, S subunit insig. 27 95
  Rhodanobacter sp. FW510-T8 OKGIIK_15905 hypothetical protein insig. 29 70
  Escherichia coli ECOR38 HEPCGN_09460 type I restriction endonuclease subunit S insig. 31 46
o Shewanella sp. ANA-3 Shewana3_3793 restriction modification system DNA specificity subunit (RefSeq) insig. 32 45
  Xanthobacter sp. DMC5 GFF2199 hypothetical protein insig. 28 67
  Synechocystis sp000284455 PCC 6803 SGL_RS01815 restriction endonuclease subunit S cofit 29 65
  Rhodanobacter sp. FW510-T8 OKGIIK_14000 restriction endonuclease subunit S insig. 26 51
o Alteromonas macleodii MIT1002 MIT1002_04091 EcoKI restriction-modification system protein HsdS insig. 26 96
  Acinetobacter radioresistens SK82 MPMX26_02869 hypothetical protein strong 25 82
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS05385 restriction endonuclease subunit S insig. 27 72
o Cellulophaga baltica 18 M666_RS14695 restriction endonuclease subunit S insig. 27 96
o Cupriavidus basilensis FW507-4G11 RR42_RS18680 hypothetical protein insig. 26 81
  Pseudomonas orientalis W4I3 QF045_RS26415 restriction endonuclease subunit S cofit 30 36
  Cellulophaga baltica 18 M666_RS02035 restriction endonuclease subunit S cofit 25 62
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_14265 Restriction endonuclease subunit S no data 27 83
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09050 restriction endonuclease subunit S insig. 27 42
  Castellaniella sp019104865 MT123 ABCV34_RS11945 restriction endonuclease subunit S insig. 28 36
  Synechocystis sp000284455 PCC 6803 SGL_RS01155 restriction endonuclease subunit S sig. 26 50
o Escherichia coli ECRC100 OKFHMN_05700 restriction endonuclease insig. 24 97
  Caulobacter crescentus NA1000 CCNA_00657 type I restriction-modification system specificity subunit insig. 23 80
  Caulobacter crescentus NA1000 Δfur CCNA_00657 type I restriction-modification system specificity subunit cofit 23 80
  Rhodanobacter sp. FW510-T8 OKGIIK_06685 Restriction endonuclease subunit S insig. 24 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02840 restriction endonuclease subunit S sig. 25 58
o Methanococcus maripaludis JJ MMJJ_RS02750 restriction endonuclease subunit S no data 24 96
  Pseudomonas stutzeri RCH2 Psest_3406 Restriction endonuclease S subunits sig. 23 82
  Marinobacter adhaerens HP15 HP15_1579 type I site-specific restriction-modification system, S subunit sig. 28 65
  Shewanella sp. ANA-3 Shewana3_2028 restriction modification system DNA specificity subunit (RefSeq) insig. 26 42
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS08650 restriction endonuclease subunit S insig. 22 66
  Alteromonas macleodii MIT1002 MIT1002_03393 Type I restriction enzyme EcoKI specificity protein insig. 19 82
o Sinorhizobium meliloti 1021 SMc02295 specificity protein S insig. 21 83
o Paraburkholderia graminis OAS925 ABIE53_005411 type I restriction enzyme S subunit strong 21 82
  Synechocystis sp000284455 PCC 6803 SGL_RS01155 restriction endonuclease subunit S sig. 24 73
  Klebsiella pneumoniae MKP103 KDGMDA_01865 restriction endonuclease subunit S cofit 22 75
  Paraburkholderia graminis OAS925 ABIE53_000532 type I restriction enzyme S subunit insig. 28 46
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01060 restriction endonuclease subunit S insig. 27 44
  Fusobacterium nucleatum SB010 HUW76_09000 restriction endonuclease subunit S insig. 32 38
  Pseudomonas sp. RS175 PFR28_03898 hypothetical protein insig. 23 62
  Herbaspirillum seropedicae SmR1 HSERO_RS22785 Type I site-specific deoxyribonuclease specificity subunit insig. 22 78
  Vibrio cholerae E7946 ATCC 55056 CSW01_08870 restriction endonuclease subunit S insig. 25 79
  Shewanella oneidensis MR-1 SO4264 hsdS-2 type I restriction-modification system, S subunit (NCBI ptt file) insig. 21 62
o Methanococcus maripaludis JJ MMJJ_RS02750 restriction endonuclease subunit S no data 25 46
  Castellaniella sp019104865 MT123 ABCV34_RS11945 restriction endonuclease subunit S insig. 24 46
  Shewanella sp. ANA-3 Shewana3_4163 restriction modification system DNA specificity subunit (RefSeq) cofit 23 58
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS05385 restriction endonuclease subunit S insig. 23 49
  Rhodanobacter denitrificans MT42 LRK55_RS10120 restriction endonuclease subunit S cofit 21 72
  Shewanella sp. ANA-3 Shewana3_2028 restriction modification system DNA specificity subunit (RefSeq) insig. 23 70
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09050 restriction endonuclease subunit S insig. 22 80
  Cellulophaga baltica 18 M666_RS02035 restriction endonuclease subunit S cofit 29 31
o Rhodanobacter denitrificans MT42 LRK55_RS00335 restriction endonuclease subunit S cofit 23 82
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1524.1 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) insig. 21 68
  Bacteroides stercoris CC31F HMPREF1181_RS13630 restriction endonuclease subunit S insig. 22 65
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1000 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) insig. 21 63
  Klebsiella pneumoniae MKP103 KDGMDA_01865 restriction endonuclease subunit S cofit 25 49
  Escherichia coli BW25113 b4348 hsdS specificity determinant for hsdM and hsdR (NCBI) sig. 23 80
  Phocaeicola dorei CL03T12C01 ABI39_RS21405 restriction endonuclease subunit S insig. 20 92
o Cellulophaga baltica 18 M666_RS14695 restriction endonuclease subunit S insig. 27 46
  Paraburkholderia graminis OAS925 ABIE53_000532 type I restriction enzyme S subunit insig. 24 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3107 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) strong 24 44
  Escherichia coli BW25113 b4348 hsdS specificity determinant for hsdM and hsdR (NCBI) sig. 22 46
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0423 Restriction endonuclease S subunits insig. 22 79
  Pseudomonas segetis P6 ACVTMO_RS09865 restriction endonuclease subunit S insig. 20 70
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3938.1 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) insig. 28 30
  Bacteroides thetaiotaomicron VPI-5482 BT4520 Type I restriction enzyme EcoAI specificity protein (NCBI ptt file) insig. 24 48
  Synechococcus elongatus PCC 7942 Synpcc7942_1064 type I restriction-modification insig. 23 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20485 hypothetical protein cofit 23 60
  Pseudomonas orientalis W4I3 QF045_RS26415 restriction endonuclease subunit S cofit 23 76
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_14265 Restriction endonuclease subunit S no data 27 45
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4441 Restriction endonuclease S subunits insig. 21 80
  Rhodanobacter sp. FW510-T8 OKGIIK_13430 Methylase-S domain-containing protein insig. 24 87
  Pseudomonas fluorescens FW300-N2E3 AO353_11440 hypothetical protein insig. 23 64
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.612.1 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) insig. 29 23
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS19490 restriction endonuclease subunit S insig. 28 29
  Cellulophaga baltica 18 M666_RS02035 restriction endonuclease subunit S cofit 30 25
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4441 Restriction endonuclease S subunits insig. 29 29
  Alteromonas macleodii MIT1002 MIT1002_03211 Type I restriction-modification system methyltransferase subunit insig. 21 62
  Castellaniella sp019104865 MT123 ABCV34_RS09200 restriction endonuclease subunit S cofit 23 47
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06655 hypothetical protein insig. 31 31
  Xanthobacter sp. DMC5 GFF2199 hypothetical protein insig. 27 23
  Fusobacterium nucleatum SB010 HUW76_09000 restriction endonuclease subunit S insig. 27 39
  Pseudomonas stutzeri RCH2 Psest_1098 Restriction endonuclease S subunits strong 24 79
  Phocaeicola dorei CL03T12C01 ABI39_RS21420 restriction endonuclease subunit S insig. 22 75
o Dickeya dianthicola ME23 DZA65_RS04765 restriction endonuclease subunit S insig. 24 47
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00020 restriction endonuclease subunit S no data 24 39
  Pseudomonas putida KT2440 PP_4742 Type I restriction-modification system, S subunit insig. 21 71
o Escherichia coli ECRC100 OKFHMN_05700 restriction endonuclease insig. 25 47
  Shewanella sp. ANA-3 Shewana3_2028 restriction modification system DNA specificity subunit (RefSeq) insig. 23 29
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02138 type I restriction enzyme, S subunit insig. 22 65
  Paraburkholderia graminis OAS925 ABIE53_000532 type I restriction enzyme S subunit insig. 30 20
  Bacteroides ovatus ATCC 8483 BACOVA_05325 type I restriction modification DNA specificity domain protein cofit 27 36
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02840 restriction endonuclease subunit S sig. 35 19
  Klebsiella michiganensis M5al BWI76_RS03370 type I restriction-modification system subunit S cofit 24 28
  Bacteroides thetaiotaomicron VPI-5482 BT4540 putative Type I restriction enzyme MjaXP specificity protein (NCBI ptt file) insig. 26 43
  Kangiella aquimarina DSM 16071 B158DRAFT_1643 Restriction endonuclease S subunits insig. 32 23