Homologs of truD from Escherichia coli BW25113

truD: tRNA pseudouridine synthase D (NCBI)
SEED: tRNA pseudouridine 13 synthase (EC 4.2.1.-)
KEGG: tRNA pseudouridine synthase D

72 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
o	Escherichia coli BL21	ECD_02595		tRNA(Glu) pseudouridine(13) synthase	insig.	100	100
o	Escherichia coli ECRC62	BNILDI_10840	truD	tRNA pseudouridine(13) synthase TruD	insig.	100	100
	Escherichia coli BW25113	b2745	truD	tRNA pseudouridine synthase D (NCBI)	insig.	100	100
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_00988		tRNA pseudouridine synthase D	insig.	100	100
o	Escherichia coli ECRC100	OKFHMN_20475	truD	tRNA pseudouridine(13) synthase TruD	insig.	99	100
o	Escherichia coli ECRC101	MCAODC_11000	truD	tRNA pseudouridine(13) synthase TruD	insig.	99	100
o	Escherichia coli ECRC102	NIAGMN_18245	truD	tRNA pseudouridine(13) synthase TruD	insig.	99	100
o	Escherichia coli ECRC98	JDDGAC_24140	truD	tRNA pseudouridine(13) synthase TruD	insig.	99	100
o	Escherichia coli ECRC99	KEDOAH_07665	truD	tRNA pseudouridine(13) synthase TruD	no data	99	100
o	Escherichia coli ECOR27	NOLOHH_12290	truD	tRNA pseudouridine(13) synthase TruD	insig.	99	100
o	Escherichia coli ECOR38	HEPCGN_19655	truD	tRNA pseudouridine(13) synthase TruD	insig.	99	100
o	Escherichia coli Nissle 1917	ECOLIN_RS15350		tRNA pseudouridine(13) synthase TruD	insig.	99	100
o	Escherichia fergusonii Becca	EFB2_01165		tRNA pseudouridine synthase D	insig.	99	100
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF4793		tRNA pseudouridine 13 synthase (EC 4.2.1.-)	insig.	89	100
o	Klebsiella pneumoniae MKP103	KDGMDA_03240		tRNA pseudouridine(13) synthase TruD	insig.	86	100
o	Enterobacter asburiae PDN3	EX28DRAFT_2841		tRNA pseudouridine synthase, TruD family	insig.	86	100
o	Klebsiella michiganensis M5al	BWI76_RS22665		tRNA pseudouridine(13) synthase TruD	insig.	86	100
o	Enterobacter sp. TBS_079	MPMX20_03631		tRNA pseudouridine synthase D	sig.	85	100
o	Serratia liquefaciens MT49	IAI46_03765		tRNA pseudouridine(13) synthase TruD	insig.	65	100
o	Pantoea sp. MT58	IAI47_04215		tRNA pseudouridine(13) synthase TruD	insig.	63	99
o	Pantoea agglomerans CFBP13505 P0401	PagCFBP13505_RS16750		tRNA pseudouridine(13) synthase TruD	insig.	64	98
o	Erwinia amylovora T8	OLJFJH_09360		tRNA pseudouridine(13) synthase TruD	insig.	63	97
o	Erwinia tracheiphila HP pepo 2.2	IJEDHG_17480	truD	tRNA pseudouridine(13) synthase TruD	insig.	63	97
o	Erwinia tracheiphila SCR3	LU632_RS06460	truD	tRNA pseudouridine(13) synthase TruD	insig.	63	97
o	Rahnella sp. WP5	EX31_RS07845		tRNA pseudouridine(13) synthase TruD	insig.	60	100
o	Pectobacterium carotovorum WPP14	HER17_RS04335		tRNA pseudouridine(13) synthase TruD	insig.	59	98
o	Dickeya dadantii 3937	DDA3937_RS16890		tRNA pseudouridine(13) synthase TruD	insig.	61	97
o	Dickeya dianthicola 67-19	HGI48_RS16960		tRNA pseudouridine(13) synthase TruD	insig.	61	97
o	Dickeya dianthicola ME23	DZA65_RS18035		tRNA pseudouridine(13) synthase TruD	insig.	60	97
o	Shewanella loihica PV-4	Shew_1209		pseudouridylate synthase (RefSeq)	sig.	48	95
o	Alteromonas macleodii MIT1002	MIT1002_00629		tRNA pseudouridine synthase D	insig.	45	96
o	Shewanella amazonensis SB2B	Sama_1040		pseudouridylate synthase (RefSeq)	sig.	47	96
o	Shewanella sp. ANA-3	Shewana3_1120		tRNA pseudouridine synthase D, TruD (RefSeq)	cofit	46	99
o	Vibrio cholerae E7946 ATCC 55056	CSW01_02815		tRNA pseudouridine(13) synthase TruD	insig.	47	95
o	Shewanella oneidensis MR-1	SO3436		conserved hypothetical protein (NCBI ptt file)	strong	47	98
o	Rhodanobacter sp. FW510-T8	OKGIIK_08130	truD	tRNA pseudouridine(13) synthase TruD	sig.	45	96
o	Rhodanobacter sp000427505 FW510-R12	LRK53_RS12280		tRNA pseudouridine(13) synthase TruD	insig.	45	96
o	Dyella japonica UNC79MFTsu3.2	ABZR86_RS06605		tRNA pseudouridine(13) synthase TruD	insig.	43	97
o	Rhodanobacter denitrificans MT42	LRK55_RS16365		tRNA pseudouridine(13) synthase TruD	insig.	44	95
o	Rhodanobacter denitrificans FW104-10B01	LRK54_RS16640		tRNA pseudouridine(13) synthase TruD	sig.	44	95
o	Kangiella aquimarina DSM 16071	B158DRAFT_2295		Uncharacterized conserved protein	cofit	36	95
o	Pseudomonas sp. DMC3	GFF2080		tRNA pseudouridine synthase D	insig.	40	94
o	Lysobacter sp. OAE881	ABIE51_RS06470		tRNA pseudouridine(13) synthase TruD	insig.	39	95
o	Pseudomonas fluorescens FW300-N2E3	AO353_16595		pseudouridine synthase	sig.	39	94
o	Pseudomonas stutzeri RCH2	Psest_2811		Uncharacterized conserved protein	insig.	38	95
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_3111		tRNA pseudouridine 13 synthase (EC 4.2.1.-)	insig.	38	94
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_3041		tRNA pseudouridine 13 synthase (EC 4.2.1.-)	sig.	39	94
o	Pseudomonas fluorescens GW456-L13	PfGW456L13_4679		tRNA pseudouridine 13 synthase (EC 4.2.1.-)	sig.	39	94
o	Pseudomonas segetis P6	ACVTMO_RS16985	truD	tRNA pseudouridine(13) synthase TruD	insig.	40	97
o	Pseudomonas fluorescens FW300-N2C3	AO356_05905		pseudouridine synthase	insig.	39	94
o	Pseudomonas orientalis W4I3	QF045_RS09190		tRNA pseudouridine(13) synthase TruD	insig.	38	94
o	Pseudomonas sp. S08-1	OH686_18165		tRNA pseudouridine(13) synthase	cofit	40	97
o	Pseudomonas lactucae CFBP13502	GEMAOFIL_01439		tRNA pseudouridine synthase D	cofit	38	94
o	Pseudomonas simiae WCS417	PS417_06345		pseudouridine synthase	insig.	38	94
o	Pseudomonas fluorescens SBW25	PFLU_RS06410		tRNA pseudouridine(13) synthase TruD	insig.	38	94
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS06410		tRNA pseudouridine(13) synthase TruD	insig.	38	94
o	Pseudomonas sp. RS175	PFR28_00423		tRNA pseudouridine synthase D	insig.	38	94
o	Pseudomonas aeruginosa PA14	IKLFDK_18515		tRNA pseudouridine(13) synthase TruD	insig.	39	94
o	Pseudomonas syringae pv. syringae B728a	Psyr_1370		tRNA pseudouridine synthase D, TruD	insig.	39	94
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_1370		tRNA pseudouridine synthase D, TruD	insig.	39	94
o	Pseudomonas sp. SVBP6	COO64_RS19775	truD	tRNA pseudouridine(13) synthase TruD	insig.	39	94
o	Pseudomonas aeruginosa MRSN321	DY961_RS14845	truD;go_function=RNA	tRNA pseudouridine(13) synthase TruD	insig.	39	94
o	Pseudomonas aeruginosa PUPa3	DQ20_RS42280	truD;go_function=RNA	tRNA pseudouridine(13) synthase TruD	insig.	39	94
o	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.3137.1		tRNA pseudouridine 13 synthase (EC 4.2.1.-)	insig.	38	97
o	Pseudomonas sp. BP01	JOY50_RS23735	truD	tRNA pseudouridine(13) synthase TruD	insig.	38	92
o	Pseudomonas putida KT2440	PP_1619		tRNA pseudouridine synthase D	insig.	37	92
o	Marinobacter adhaerens HP15	HP15_1278		pseudouridylate synthase	insig.	32	92
	Variovorax sp. SCN45	GFF8009		tRNA pseudouridine(13) synthase (EC 5.4.99.27)	no data	43	45
	Methanococcus maripaludis JJ	MMJJ_RS05390		tRNA pseudouridine(13) synthase TruD	insig.	31	41
	Methanococcus maripaludis S2	MMP_RS00100		tRNA pseudouridine(13) synthase TruD	sig.	32	41
	Methanococcus maripaludis JJ	MMJJ_RS01835		tRNA pseudouridine(13) synthase TruD	insig.	31	43
	Methanococcus maripaludis S2	MMP_RS03235		tRNA pseudouridine(13) synthase TruD	sig.	31	43