Homologs of Rru_A2003 from Rhodospirillum rubrum S1H

Radical SAM (NCBI)
SEED: Fe-S OXIDOREDUCTASE (1.8.-.-)

75 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Rhodospirillum rubrum S1H	Rru_A2003		Radical SAM (NCBI)	insig.	100	100
o	Azospirillum sp. SherDot2	MPMX19_06038		hypothetical protein	insig.	69	100
o	Dechlorosoma suillum PS	Dsui_2420		uncharacterized radical SAM protein YgiQ	insig.	68	92
o	Methylophilus sp. DMC18	GFF83		hypothetical protein	insig.	65	95
o	Xanthobacter sp. DMC5	GFF13		hypothetical protein	insig.	70	93
o	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF4814		Fe-S OXIDOREDUCTASE (1.8.-.-)	insig.	63	99
o	Pseudomonas aeruginosa MRSN321	DY961_RS10420		YgiQ family radical SAM protein	insig.	64	95
o	Pseudomonas aeruginosa PUPa3	DQ20_RS51635		YgiQ family radical SAM protein	sig.	64	95
o	Pseudomonas aeruginosa PA14	IKLFDK_28910		YgiQ family radical SAM protein	insig.	64	95
o	Rhodopseudomonas palustris CGA009	TX73_003515		YgiQ family radical SAM protein	insig.	70	92
o	Pseudomonas sp. S08-1	OH686_15955		UPF0313 [4Fe-4S] protein YgiQ	cofit	63	95
o	Pseudomonas putida KT2440	PP_4872		putative enzyme of unknown function	insig.	63	95
o	Pseudomonas stutzeri RCH2	Psest_0701		uncharacterized radical SAM protein YgiQ	insig.	64	95
o	Pseudomonas sp. BP01	JOY50_RS17365		YgiQ family radical SAM protein	insig.	63	95
o	Alteromonas macleodii MIT1002	MIT1002_01793		ribosomal protein S12 methylthiotransferase	insig.	61	95
o	Pseudomonas segetis P6	ACVTMO_RS20480		YgiQ family radical SAM protein	insig.	63	96
o	Vibrio cholerae E7946 ATCC 55056	CSW01_08605		YgiQ family radical SAM protein	cofit	62	98
o	Pseudomonas sp. RS175	PFR28_05137		hypothetical protein	insig.	65	91
o	Pseudomonas sp. SVBP6	COO64_RS17995		YgiQ family radical SAM protein	insig.	65	91
o	Pseudomonas fluorescens GW456-L13	PfGW456L13_137		Fe-S OXIDOREDUCTASE (1.8.-.-)	insig.	64	91
o	Pseudomonas fluorescens FW300-N2C3	AO356_08575		YgiQ family radical SAM protein	insig.	65	91
o	Pseudomonas sp. DMC3	GFF3238		hypothetical protein	cofit	61	99
o	Pseudomonas fluorescens FW300-N2E3	AO353_13235		YgiQ family radical SAM protein	insig.	65	91
o	Pseudomonas syringae pv. syringae B728a	Psyr_0587		Radical SAM	insig.	61	99
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_0587		Radical SAM	insig.	61	99
o	Pseudomonas fluorescens SBW25	PFLU_RS02660		YgiQ family radical SAM protein	insig.	61	96
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS02660		YgiQ family radical SAM protein	insig.	61	96
o	Pseudomonas orientalis W4I3	QF045_RS05640		YgiQ family radical SAM protein	cofit	61	96
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_3600		Fe-S OXIDOREDUCTASE (1.8.-.-)	insig.	61	99
o	Pseudomonas lactucae CFBP13502	GEMAOFIL_00755		hypothetical protein	cofit	61	96
o	Pseudomonas simiae WCS417	PS417_02590		hypothetical protein	insig.	60	99
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_1396		Fe-S OXIDOREDUCTASE (1.8.-.-)	insig.	65	91
o	Shewanella sp. ANA-3	Shewana3_3874		hypothetical protein (RefSeq)	insig.	59	98
o	Shewanella oneidensis MR-1	SO0311		hypothetical Fe-S oxidoreductase (NCBI ptt file)	insig.	60	98
o	Serratia liquefaciens MT49	IAI46_21835		YgiQ family radical SAM protein	insig.	63	91
o	Escherichia coli ECRC100	OKFHMN_18915	ygiQ	YgiQ family radical SAM protein	insig.	59	100
o	Escherichia coli ECRC101	MCAODC_09430	ygiQ	YgiQ family radical SAM protein	insig.	59	100
o	Escherichia coli ECRC102	NIAGMN_16680	ygiQ	YgiQ family radical SAM protein	insig.	59	100
o	Escherichia coli ECRC99	KEDOAH_09230	ygiQ	YgiQ family radical SAM protein	no data	59	100
o	Escherichia coli BL21	ECD_02888		Radical SAM superfamily protein	cofit	59	100
o	Escherichia coli ECOR38	HEPCGN_17785	ygiQ	YgiQ family radical SAM protein	insig.	59	100
o	Escherichia fergusonii Becca	EFB2_00795		hypothetical protein	insig.	59	100
o	Escherichia coli ECOR27	NOLOHH_10695	ygiQ	YgiQ family radical SAM protein	insig.	59	100
o	Escherichia coli ECRC62	BNILDI_00820	ygiQ	YgiQ family radical SAM protein	cofit	59	100
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_00686		hypothetical protein	insig.	59	100
o	Escherichia coli Nissle 1917	ECOLIN_RS17355		YgiQ family radical SAM protein	cofit	59	100
o	Escherichia coli BW25113	b4469	ygiQ	hypothetical protein (NCBI)	insig.	59	100
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF3129		Probable Fe-S oxidoreductase family 2	insig.	62	91
o	Enterobacter asburiae PDN3	EX28DRAFT_3051		uncharacterized radical SAM protein YgiQ	insig.	61	91
o	Escherichia coli ECRC98	JDDGAC_22550	ygiQ	YgiQ family radical SAM protein	insig.	59	100
o	Klebsiella pneumoniae MKP103	KDGMDA_05150		YgiQ family radical SAM protein	insig.	62	91
o	Rahnella sp. WP5	EX31_RS04200		YgiQ family radical SAM protein	insig.	59	95
o	Klebsiella michiganensis M5al	BWI76_RS24310		YgiQ family radical SAM protein	insig.	61	91
o	Enterobacter sp. TBS_079	MPMX20_03857		hypothetical protein	insig.	61	91
o	Shewanella amazonensis SB2B	Sama_3349		hypothetical protein (RefSeq)	insig.	56	99
o	Shewanella loihica PV-4	Shew_0233		hypothetical protein (RefSeq)	insig.	60	90
o	Acinetobacter radioresistens SK82	MPMX26_00127		hypothetical protein	insig.	55	93
	Acinetobacter baumannii LAC-4	RR41_RS17985		YgiQ family radical SAM protein	insig.	65	64
o	Variovorax sp. OAS795	ABID97_RS14400		YgiQ family radical SAM protein	insig.	62	64
	Acidovorax sp. GW101-3H11	Ac3H11_4121		Fe-S OXIDOREDUCTASE (1.8.-.-)	insig.	67	58
o	Variovorax sp. SCN45	GFF1034		UPF0313 [4Fe-4S] protein YgiQ	insig.	63	63
o	Parabacteroides merdae CL09T00C40	HMPREF1078_RS02025		YgiQ family radical SAM protein	insig.	45	86
o	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS15500		YgiQ family radical SAM protein	insig.	43	87
o	Bacteroides stercoris CC31F	HMPREF1181_RS04635		YgiQ family radical SAM protein	cofit	44	86
o	Phocaeicola dorei CL03T12C01	ABI39_RS11465		YgiQ family radical SAM protein	insig.	43	87
o	Bacteroides ovatus ATCC 8483	BACOVA_00405		putative radical SAM protein YgiQ	insig.	41	86
o	Bacteroides thetaiotaomicron VPI-5482	BT0254		putative Fe-S oxidoreductase (NCBI ptt file)	sig.	42	86
	Desulfovibrio vulgaris Hildenborough JW710	DVU2413		radical SAM domain protein (TIGR)	insig.	42	80
	Desulfovibrio vulgaris Miyazaki F	DvMF_2985		Radical SAM domain protein (RefSeq)	insig.	42	82
	Fusobacterium nucleatum SB010	HUW76_04510		YgiQ family radical SAM protein	cofit	39	79
	Acidovorax sp. GW101-3H11	Ac3H11_4121		Fe-S OXIDOREDUCTASE (1.8.-.-)	insig.	73	33
o	Variovorax sp. SCN45	GFF1034		UPF0313 [4Fe-4S] protein YgiQ	insig.	72	33
o	Variovorax sp. OAS795	ABID97_RS14400		YgiQ family radical SAM protein	insig.	71	33
	Acinetobacter baumannii LAC-4	RR41_RS17985		YgiQ family radical SAM protein	insig.	69	31
	Synechococcus elongatus PCC 7942	Synpcc7942_2512		hypothetical protein	strong	26	37