Conservation of cofitness between Xcc-8004.3118.1 and Xcc-8004.4834.1 in Xanthomonas campestris pv. campestris strain 8004

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.3118.1 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 1.0 Xcc-8004.4834.1 Sodium - Bile acid symporter 0.58 14
Dyella japonica UNC79MFTsu3.2 0.68 ABZR86_RS00655 CinA family protein 0.55 ABZR86_RS17040 bile acid:sodium symporter family protein low > 74
Rhodanobacter denitrificans MT42 0.67 LRK55_RS14690 CinA family protein 0.52 LRK55_RS06805 bile acid:sodium symporter family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.67 LRK54_RS14975 CinA family protein 0.52 LRK54_RS07065 bile acid:sodium symporter low > 59
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_03735 pncC damage-inducible protein CinA 0.51 OKGIIK_16570 Bile acid:sodium symporter 0.50 3
Dickeya dadantii 3937 0.54 DDA3937_RS16250 nicotinamide-nucleotide amidase 0.52 DDA3937_RS10620 bile acid:sodium symporter low > 74
Dickeya dianthicola 67-19 0.54 HGI48_RS16360 nicotinamide-nucleotide amidase 0.52 HGI48_RS10620 bile acid:sodium symporter low > 71
Dickeya dianthicola ME23 0.53 DZA65_RS17455 nicotinamide-nucleotide amidase 0.52 DZA65_RS11100 bile acid:sodium symporter low > 75
Escherichia coli ECOR27 0.52 NOLOHH_12540 pncC nicotinamide-nucleotide amidase 0.50 NOLOHH_13905 yfeH Putative symporter YfeH low > 75
Escherichia coli BL21 0.52 ECD_02550 nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase 0.50 ECD_02309 putative inorganic ion transporter low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01034 Nicotinamide-nucleotide amidohydrolase PncC 0.50 OHPLBJKB_01314 hypothetical protein low > 73
Escherichia coli Nissle 1917 0.52 ECOLIN_RS15065 nicotinamide-nucleotide amidase 0.50 ECOLIN_RS13845 bile acid:sodium symporter family protein low > 55
Escherichia coli ECRC62 0.52 BNILDI_11100 pncC nicotinamide-nucleotide amidase 0.50 BNILDI_12770 yfeH Putative symporter YfeH low > 75
Escherichia coli BW25113 0.52 b2700 ygaD competence damage-inducible protein A (NCBI) 0.50 b2410 yfeH predicted inner membrane protein (NCBI) low > 76
Enterobacter sp. TBS_079 0.52 MPMX20_03581 Nicotinamide-nucleotide amidohydrolase PncC 0.46 MPMX20_03303 hypothetical protein low > 85
Escherichia coli ECRC101 0.52 MCAODC_11225 pncC nicotinamide-nucleotide amidase 0.50 MCAODC_12755 yfeH Putative symporter YfeH low > 87
Escherichia coli ECRC100 0.52 OKFHMN_20700 pncC nicotinamide-nucleotide amidase 0.50 OKFHMN_22225 yfeH Putative symporter YfeH low > 80
Escherichia coli ECRC99 0.52 KEDOAH_07435 pncC nicotinamide-nucleotide amidase 0.50 KEDOAH_05995 yfeH Putative symporter YfeH — —
Escherichia coli ECRC98 0.52 JDDGAC_24365 pncC nicotinamide-nucleotide amidase 0.50 JDDGAC_26175 yfeH Putative symporter YfeH low > 86
Escherichia coli ECRC102 0.52 NIAGMN_18470 pncC nicotinamide-nucleotide amidase 0.50 NIAGMN_19995 yfeH Putative symporter YfeH — —
Enterobacter asburiae PDN3 0.52 EX28DRAFT_2786 amidohydrolase, PncC family 0.47 EX28DRAFT_0219 Predicted Na+-dependent transporter low > 76
Escherichia fergusonii Becca 0.52 EFB2_01224 Nicotinamide-nucleotide amidohydrolase PncC 0.50 EFB2_01467 hypothetical protein low > 86
Escherichia coli ECOR38 0.52 HEPCGN_19895 pncC nicotinamide-nucleotide amidase 0.51 HEPCGN_21405 yfeH Putative symporter YfeH low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF4694 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.49 GFF2039 Putative cytochrome oxidase low > 78
Klebsiella michiganensis M5al 0.49 BWI76_RS22185 hypothetical protein 0.48 BWI76_RS20615 sodium symporter low > 92
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS27055 CinA family protein 0.57 QEN71_RS00995 bile acid:sodium symporter family protein low > 153
Serratia liquefaciens MT49 0.47 IAI46_03835 nicotinamide-nucleotide amidase 0.49 IAI46_18420 bile acid:sodium symporter low > 86
Pectobacterium carotovorum WPP14 0.46 HER17_RS05040 nicotinamide-nucleotide amidase 0.52 HER17_RS10785 bile acid:sodium symporter low > 75
Erwinia tracheiphila SCR3 0.46 LU632_RS15740 pncC nicotinamide-nucleotide amidase 0.45 LU632_RS06655 bile acid:sodium symporter low > 74
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_1377 CinA, C-terminal 0.35 Psyr_0648 transporter, putative low > 86
Pseudomonas stutzeri RCH2 0.46 Psest_2873 competence/damage-inducible protein CinA C-terminal domain 0.50 Psest_4207 Predicted Na+-dependent transporter low > 67
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_1377 CinA, C-terminal 0.35 Psyr_0648 transporter, putative low > 86
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS16895 competence damage-inducible protein A 0.53 BPHYT_RS02065 membrane protein low > 109
Pantoea sp. MT58 0.45 IAI47_04295 nicotinamide-nucleotide amidase 0.49 IAI47_05465 bile acid:sodium symporter low > 76
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_06305 nicotinamide-nucleotide amidase 0.55 H281DRAFT_02114 solute carrier family 10 (sodium/bile acid cotransporter), member 7 low > 103
Paraburkholderia graminis OAS925 0.44 ABIE53_003546 nicotinamide-nucleotide amidase 0.54 ABIE53_000558 sodium/bile acid cotransporter 7 low > 113
Pseudomonas simiae WCS417 0.44 PS417_05810 damage-inducible protein CinA 0.47 PS417_16190 bile acid:sodium symporter low > 88
Pseudomonas fluorescens SBW25 0.44 PFLU_RS05880 CinA family protein 0.50 PFLU_RS18220 bile acid:sodium symporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS05880 CinA family protein 0.50 PFLU_RS18220 bile acid:sodium symporter low > 109
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_16800 damage-inducible protein CinA 0.36 AO353_13885 bile acid:sodium symporter low > 101
Dechlorosoma suillum PS 0.43 Dsui_0710 competence/damage-inducible protein CinA-like protein 0.33 Dsui_0418 putative Na+-dependent transporter low > 51
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS01580 CinA family protein 0.45 ABZR87_RS00755 bile acid:sodium symporter family protein low > 80
Rahnella sp. WP5 0.43 EX31_RS07805 nicotinamide-nucleotide amidase 0.51 EX31_RS06855 bile acid:sodium symporter low > 89
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF3091 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.51 GFF18 Sodium/bile acid symporter family low > 90
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS16840 competence damage-inducible protein A 0.58 HSERO_RS13635 membrane protein low > 78
Ralstonia solanacearum UW163 0.42 UW163_RS07710 CinA family protein 0.42 UW163_RS08520 bile acid:sodium symporter — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS17625 damage-inducible protein CinA 0.45 RR42_RS03420 bile acid:sodium symporter low > 128
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS05915 CinA family protein 0.43 RALBFv3_RS05105 bile acid:sodium symporter low > 76
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_3142 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.36 Pf1N1B4_1269 Sodium/bile acid symporter family low > 87
Ralstonia solanacearum PSI07 0.42 RPSI07_RS11330 CinA family protein 0.43 RPSI07_RS12190 bile acid:sodium symporter — —
Ralstonia solanacearum GMI1000 0.42 RS_RS13860 CinA family protein 0.43 RS_RS12725 bile acid:sodium symporter — —
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_05675 damage-inducible protein CinA 0.34 AO356_08085 bile acid:sodium symporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_2994 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.36 Pf6N2E2_3491 Sodium/bile acid symporter family low > 103
Pseudomonas putida KT2440 0.41 PP_1628 NMN amidohydrolase 0.50 PP_2877 putative osmotic pressure-regulated transporter low > 96
Pseudomonas sp. RS175 0.41 PFR28_00471 Nicotinamide-nucleotide amidohydrolase PncC 0.36 PFR28_05240 hypothetical protein low > 88
Azospirillum sp. SherDot2 0.40 MPMX19_01107 Nicotinamide-nucleotide amidohydrolase PncC 0.50 MPMX19_03934 hypothetical protein low > 112
Magnetospirillum magneticum AMB-1 0.40 AMB_RS12830 CinA family protein 0.36 AMB_RS08405 bile acid:sodium symporter — —
Sinorhizobium meliloti 1021 0.39 SMc01039 hypothetical protein 0.52 SMc04030 hypothetical protein low > 103
Rhizobium sp. OAE497 0.37 ABIE40_RS09070 CinA family protein 0.51 ABIE40_RS16305 bile acid:sodium symporter family protein low > 107
Variovorax sp. SCN45 0.37 GFF6273 Nicotinamide-nucleotide amidase (EC 3.5.1.42) 0.57 GFF6063 Sodium/bile acid symporter family low > 127
Agrobacterium fabrum C58 0.36 Atu1442 competence/damage-inducible protein CinA 0.48 Atu3888 hypothetical protein low > 89
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS04795 CinA family protein 0.42 A4249_RS15185 bile acid:sodium symporter low > 48
Castellaniella sp019104865 MT123 0.33 ABCV34_RS10110 CinA family protein 0.44 ABCV34_RS10910 bile acid:sodium symporter family protein low > 48
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01811 competence/damage-inducible protein CinA 0.49 CCNA_01729 transporter, sodium/bile acid symporter family low > 67
Caulobacter crescentus NA1000 0.33 CCNA_01811 competence/damage-inducible protein CinA 0.49 CCNA_01729 transporter, sodium/bile acid symporter family low > 66

Not shown: 16 genomes with orthologs for Xcc-8004.3118.1 only; 5 genomes with orthologs for Xcc-8004.4834.1 only