| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.2952.1 | | transcriptional regulator, Crp/Fnr family | 1.0 | Xcc-8004.4603.1 | | Methionine ABC transporter ATP-binding protein | 0.50 | 19 |
| Azospirillum brasilense Sp245 | 0.35 | AZOBR_RS01145 | | Crp/Fnr family transcriptional regulator | 0.48 | AZOBR_RS19475 | | methionine ABC transporter ATP-binding protein | — | — |
| Azospirillum sp. SherDot2 | 0.35 | MPMX19_00212 | | Nitrogen fixation regulation protein FixK | 0.47 | MPMX19_05547 | | Methionine import ATP-binding protein MetN | — | — |
| Rhodospirillum rubrum S1H | 0.29 | Rru_A3322 | | Transcriptional Regulator, Crp/Fnr family (NCBI) | 0.47 | Rru_A0788 | | ABC transporter component (NCBI) | low | > 58 |
| Sinorhizobium meliloti 1021 | 0.27 | SMa1141 | | FNR/CRP family transcriptional regulator | 0.45 | SMc03159 | | ABC transporter ATP-binding protein | low | > 103 |
| Pseudomonas stutzeri RCH2 | 0.26 | Psest_2538 | | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases | 0.74 | Psest_4314 | | ABC-type metal ion transport system, ATPase component | low | > 67 |
| Herbaspirillum seropedicae SmR1 | 0.26 | HSERO_RS16020 | | transcriptional regulator | 0.51 | HSERO_RS07850 | | methionine ABC transporter ATP-binding protein | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.25 | RALBFv3_RS15650 | | fumarate/nitrate reduction transcriptional regulator Fnr | 0.50 | RALBFv3_RS13840 | | methionine ABC transporter ATP-binding protein | low | > 76 |
| Ralstonia solanacearum UW163 | 0.25 | UW163_RS13110 | | fumarate/nitrate reduction transcriptional regulator Fnr | 0.50 | UW163_RS15970 | | methionine ABC transporter ATP-binding protein | — | — |
| Ralstonia solanacearum PSI07 | 0.25 | RPSI07_RS17705 | | fumarate/nitrate reduction transcriptional regulator Fnr | 0.50 | RPSI07_RS19630 | | methionine ABC transporter ATP-binding protein | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.25 | RS_RS06430 | | fumarate/nitrate reduction transcriptional regulator Fnr | 0.49 | RS_RS04575 | | methionine import ATP-binding protein MetN | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.25 | Psyr_3425 | | Cyclic nucleotide-binding:Bacterial regulatory protein, Crp | 0.74 | Psyr_0281 | | ABC transporter | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.25 | Psyr_3425 | | Cyclic nucleotide-binding:Bacterial regulatory protein, Crp | 0.74 | Psyr_0281 | | ABC transporter | — | — |
| Ralstonia sp. UNC404CL21Col | 0.25 | ABZR87_RS11180 | | fumarate/nitrate reduction transcriptional regulator Fnr | 0.49 | ABZR87_RS09530 | | methionine ABC transporter ATP-binding protein | low | > 80 |
| Pseudomonas fluorescens FW300-N2E2 | 0.25 | Pf6N2E2_2323 | | Fumarate and nitrate reduction regulatory protein | 0.65 | Pf6N2E2_4172 | | Methionine ABC transporter ATP-binding protein | low | > 103 |
| Pseudomonas sp. RS175 | 0.25 | PFR28_01079 | | Transcriptional activator protein Anr | 0.74 | PFR28_04614 | | Methionine import ATP-binding protein MetN | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.24 | AO356_02485 | | transcriptional regulator | 0.74 | AO356_11510 | | methionine ABC transporter ATP-binding protein | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.24 | Pf1N1B4_3867 | | Fumarate and nitrate reduction regulatory protein | 0.74 | Pf1N1B4_1866 | | Methionine ABC transporter ATP-binding protein | — | — |
| Acidovorax sp. GW101-3H11 | 0.24 | Ac3H11_975 | | transcriptional regulator, Crp/Fnr family | 0.48 | Ac3H11_631 | | Methionine ABC transporter ATP-binding protein | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_4071 | | Fumarate and nitrate reduction regulatory protein | 0.73 | PfGW456L13_602 | | Methionine ABC transporter ATP-binding protein | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.24 | PFLU_RS22395 | | fumarate/nitrate reduction transcriptional regulator Fnr | 0.73 | PFLU_RS00350 | | methionine ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas simiae WCS417 | 0.24 | PS417_20785 | | transcriptional regulator | 0.73 | PS417_00360 | | methionine ABC transporter ATP-binding protein | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.24 | PFLU_RS22395 | | fumarate/nitrate reduction transcriptional regulator Fnr | 0.73 | PFLU_RS00350 | | methionine ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.24 | AO353_00660 | | transcriptional regulator | 0.73 | AO353_10890 | | methionine ABC transporter ATP-binding protein | low | > 101 |
| Paraburkholderia sabiae LMG 24235 | 0.24 | QEN71_RS17975 | | helix-turn-helix domain-containing protein | 0.47 | QEN71_RS04160 | | methionine ABC transporter ATP-binding protein | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.24 | H281DRAFT_01640 | | transcriptional regulator, Crp/Fnr family | 0.48 | H281DRAFT_03906 | | D-methionine transport system ATP-binding protein | low | > 103 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.24 | GFF4142 | | transcriptional regulator, Crp/Fnr family | 0.45 | GFF5037 | | Methionine ABC transporter ATP-binding protein | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.24 | RR42_RS12875 | | transcriptional regulator | 0.50 | RR42_RS04555 | | phosphate ABC transporter ATP-binding protein | low | > 128 |
| Agrobacterium fabrum C58 | 0.23 | Atu1602 | | transcriptional activator, Crp family | 0.44 | Atu4487 | | ABC transporter permease | low | > 89 |
| Pseudomonas sp. S08-1 | 0.23 | OH686_02245 | | Fumarate and nitrate reduction regulatory protein | 0.74 | OH686_12260 | | Methionine ABC transporter ATP-binding protein | low | > 80 |
| Pseudomonas putida KT2440 | 0.23 | PP_4265 | | DNA-binding transcriptional dual regulator | 0.73 | PP_0114 | | methionine ABC transporter ATP-binding protein | low | > 96 |
| Escherichia coli ECRC98 | 0.23 | JDDGAC_04785 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | 0.45 | JDDGAC_13645 | metN | methionine ABC transporter ATP-binding protein MetN | low | > 86 |
| Escherichia coli Nissle 1917 | 0.23 | ECOLIN_RS08005 | | fumarate/nitrate reduction transcriptional regulator Fnr | 0.45 | ECOLIN_RS01095 | | methionine ABC transporter ATP-binding protein MetN | low | > 55 |
| Escherichia coli ECRC102 | 0.23 | NIAGMN_26410 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | 0.45 | NIAGMN_07900 | metN | methionine ABC transporter ATP-binding protein MetN | — | — |
| Escherichia coli ECOR38 | 0.23 | HEPCGN_25925 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | 0.45 | HEPCGN_07990 | metN | methionine ABC transporter ATP-binding protein MetN | low | > 87 |
| Escherichia coli ECOR27 | 0.23 | NOLOHH_19940 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | 0.45 | NOLOHH_02395 | metN | methionine ABC transporter ATP-binding protein MetN | low | > 75 |
| Escherichia coli ECRC100 | 0.23 | OKFHMN_02240 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | 0.45 | OKFHMN_10050 | metN | methionine ABC transporter ATP-binding protein MetN | low | > 80 |
| Escherichia coli ECRC62 | 0.23 | BNILDI_18090 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | 0.45 | BNILDI_09275 | metN | methionine ABC transporter ATP-binding protein MetN | low | > 75 |
| Klebsiella michiganensis M5al | 0.23 | BWI76_RS16185 | | transcriptional regulator FNR | 0.46 | BWI76_RS05365 | | D-methionine ABC transporter, ATP-binding protein | — | — |
| Enterobacter sp. TBS_079 | 0.23 | MPMX20_02035 | | Fumarate and nitrate reduction regulatory protein | 0.47 | MPMX20_01955 | | Methionine import ATP-binding protein MetN | low | > 85 |
| Escherichia coli BW25113 | 0.23 | b1334 | fnr | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | 0.45 | b0199 | metN | DL-methionine transporter subunit (NCBI) | low | > 76 |
| Enterobacter asburiae PDN3 | 0.23 | EX28DRAFT_1540 | | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases | 0.47 | EX28DRAFT_1676 | | ABC-type metal ion transport system, ATPase component | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.23 | OHPLBJKB_02348 | | Fumarate and nitrate reduction regulatory protein | 0.45 | OHPLBJKB_03462 | | Methionine import ATP-binding protein MetN | low | > 73 |
| Escherichia coli ECRC99 | 0.23 | KEDOAH_26530 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | 0.45 | KEDOAH_18105 | metN | methionine ABC transporter ATP-binding protein MetN | — | — |
| Escherichia fergusonii Becca | 0.23 | EFB2_02593 | | Fumarate and nitrate reduction regulatory protein | 0.45 | EFB2_03844 | | Methionine import ATP-binding protein MetN | low | > 86 |
| Paraburkholderia graminis OAS925 | 0.22 | ABIE53_004332 | | CRP/FNR family transcriptional regulator | 0.48 | ABIE53_003139 | | D-methionine transport system ATP-binding protein | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.22 | GFF2656 | | Fumarate and nitrate reduction regulatory protein | 0.46 | GFF21 | | Methionine ABC transporter ATP-binding protein | low | > 78 |
| Escherichia coli ECRC101 | 0.22 | MCAODC_16030 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | 0.45 | MCAODC_00565 | metN | methionine ABC transporter ATP-binding protein MetN | low | > 87 |
| Rahnella sp. WP5 | 0.22 | EX31_RS07200 | | FNR family transcription factor | 0.46 | EX31_RS12880 | | methionine ABC transporter ATP-binding protein MetN | low | > 89 |
| Dickeya dadantii 3937 | 0.22 | DDA3937_RS10950 | | fumarate/nitrate reduction transcriptional regulator Fnr | 0.47 | DDA3937_RS16845 | | methionine ABC transporter ATP-binding protein MetN | low | > 74 |
| Burkholderia phytofirmans PsJN | 0.22 | BPHYT_RS21215 | | Crp/Fnr family transcriptional regulator | 0.47 | BPHYT_RS14820 | | methionine ABC transporter ATP-binding protein | low | > 109 |
| Vibrio cholerae E7946 ATCC 55056 | 0.22 | CSW01_07190 | | transcriptional regulator FNR | 0.44 | CSW01_04645 | | methionine import ATP-binding protein MetN | low | > 62 |
| Dickeya dianthicola ME23 | 0.22 | DZA65_RS11360 | | fumarate/nitrate reduction transcriptional regulator Fnr | 0.46 | DZA65_RS17990 | | methionine ABC transporter ATP-binding protein MetN | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.22 | HER17_RS10525 | | fumarate/nitrate reduction transcriptional regulator Fnr | 0.47 | HER17_RS04380 | | methionine ABC transporter ATP-binding protein MetN | low | > 75 |
| Dickeya dianthicola 67-19 | 0.22 | HGI48_RS10900 | | fumarate/nitrate reduction transcriptional regulator Fnr | 0.47 | HGI48_RS16915 | | methionine ABC transporter ATP-binding protein MetN | low | > 71 |
| Castellaniella sp019104865 MT123 | 0.22 | ABCV34_RS06835 | | helix-turn-helix domain-containing protein | 0.54 | ABCV34_RS09545 | | methionine ABC transporter ATP-binding protein | low | > 48 |
| Pantoea sp. MT58 | 0.22 | IAI47_09580 | | FNR family transcription factor | 0.46 | IAI47_15385 | | methionine ABC transporter ATP-binding protein MetN | low | > 76 |
| Marinobacter adhaerens HP15 | 0.21 | HP15_634 | | transcriptional regulator, Crp/Fnr family | 0.67 | HP15_3903 | | methionine import ATP-binding protein MetN 2 | low | > 73 |
| Erwinia tracheiphila SCR3 | 0.21 | LU632_RS11420 | | FNR family transcription factor | 0.46 | LU632_RS19820 | metN | methionine ABC transporter ATP-binding protein MetN | low | > 74 |
| Serratia liquefaciens MT49 | 0.21 | IAI46_13260 | | FNR family transcription factor | 0.48 | IAI46_20075 | | methionine ABC transporter ATP-binding protein MetN | low | > 86 |
| Rhizobium sp. OAE497 | 0.21 | ABIE40_RS26175 | | helix-turn-helix domain-containing protein | 0.45 | ABIE40_RS23115 | | methionine ABC transporter ATP-binding protein | low | > 107 |
Not shown: 17 genomes with orthologs for Xcc-8004.2952.1 only; 12 genomes with orthologs for Xcc-8004.4603.1 only