| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.4222.1 | | Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) | 1.0 | Xcc-8004.4478.1 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | 0.59 | 7 |
| Pseudomonas simiae WCS417 | 0.75 | PS417_14040 | | alkyl hydroperoxide reductase | 0.55 | PS417_10525 | | succinyl-CoA:3-ketoacid-CoA transferase | — | — |
| Lysobacter sp. OAE881 | 0.75 | ABIE51_RS05480 | | alkyl hydroperoxide reductase subunit F | 0.83 | ABIE51_RS04380 | | CoA transferase subunit A | low | > 62 |
| Pseudomonas fluorescens FW300-N2E2 | 0.74 | Pf6N2E2_448 | | Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) | 0.55 | Pf6N2E2_2111 | | Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.74 | AO353_26960 | | alkyl hydroperoxide reductase subunit F | 0.55 | AO353_27935 | | succinyl-CoA--3-ketoacid-CoA transferase | low | > 101 |
| Pseudomonas stutzeri RCH2 | 0.74 | Psest_1134 | | alkyl hydroperoxide reductase, F subunit | 0.69 | Psest_1078 | | acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) | low | > 67 |
| Rhodospirillum rubrum S1H | 0.74 | Rru_A1417 | | thioredoxin-disulfide reductase (NCBI) | 0.33 | Rru_A1383 | | Acetate CoA-transferase (NCBI) | — | — |
| Pseudomonas putida KT2440 | 0.73 | PP_2440 | | Alkyl hydroperoxide reductase subunit F | 0.57 | PP_3122 | | acetoacetyl CoA-transferase (subunit A) | low | > 96 |
| Pseudomonas fluorescens FW300-N2C3 | 0.73 | AO356_22810 | | alkyl hydroperoxide reductase subunit F | 0.55 | AO356_21650 | | succinyl-CoA--3-ketoacid-CoA transferase | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.73 | Pf1N1B4_5010 | | Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) | 0.55 | Pf1N1B4_5833 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | low | > 87 |
| Pseudomonas sp. RS175 | 0.73 | PFR28_02481 | | Alkyl hydroperoxide reductase subunit F | 0.56 | PFR28_01325 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.73 | PFLU_RS14575 | | alkyl hydroperoxide reductase subunit F | 0.55 | PFLU_RS10585 | | CoA transferase subunit A | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.73 | PFLU_RS14575 | | alkyl hydroperoxide reductase subunit F | 0.55 | PFLU_RS10585 | | CoA transferase subunit A | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.72 | Psyr_2974 | | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | 0.59 | Psyr_3237 | | 3-oxoacid CoA-transferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.72 | Psyr_2974 | | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | 0.59 | Psyr_3237 | | 3-oxoacid CoA-transferase | low | > 86 |
| Azospirillum sp. SherDot2 | 0.72 | MPMX19_05836 | | Alkyl hydroperoxide reductase subunit F | 0.38 | MPMX19_03462 | | Acetate CoA-transferase subunit alpha | low | > 112 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.70 | A4249_RS04545 | | alkyl hydroperoxide reductase subunit F | 0.69 | A4249_RS02960 | | CoA transferase subunit A | low | > 48 |
| Burkholderia phytofirmans PsJN | 0.70 | BPHYT_RS26840 | | NADH dehydrogenase | 0.74 | BPHYT_RS13675 | | succinyl-CoA:3-ketoacid-CoA transferase | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.70 | H281DRAFT_02889 | | alkyl hydroperoxide reductase subunit F | 0.70 | H281DRAFT_04495 | | 3-oxoacid CoA-transferase subunit A | — | — |
| Paraburkholderia graminis OAS925 | 0.70 | ABIE53_005905 | | alkyl hydroperoxide reductase subunit F | 0.70 | ABIE53_002909 | | 3-oxoacid CoA-transferase subunit A | low | > 113 |
| Herbaspirillum seropedicae SmR1 | 0.69 | HSERO_RS21535 | | NADH dehydrogenase | 0.71 | HSERO_RS23190 | | succinyl-CoA:3-ketoacid-CoA transferase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.69 | QEN71_RS13375 | | alkyl hydroperoxide reductase subunit F | 0.77 | QEN71_RS05245 | | CoA transferase subunit A | low | > 153 |
| Caulobacter crescentus NA1000 | 0.68 | CCNA_03013 | | alkyl hydroperoxide reductase subunit F | 0.66 | CCNA_00206 | | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.68 | CCNA_03013 | | alkyl hydroperoxide reductase subunit F | 0.66 | CCNA_00206 | | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A | low | > 67 |
| Variovorax sp. SCN45 | 0.68 | GFF2825 | | Alkyl hydroperoxide reductase protein F | 0.72 | GFF7371 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | low | > 127 |
| Sphingomonas koreensis DSMZ 15582 | 0.67 | Ga0059261_0156 | | alkyl hydroperoxide reductase subunit F | 0.61 | Ga0059261_0265 | | 3-oxoacid CoA-transferase, A subunit | low | > 68 |
| Castellaniella sp019104865 MT123 | 0.67 | ABCV34_RS09915 | | alkyl hydroperoxide reductase subunit F | 0.74 | ABCV34_RS00770 | | CoA transferase subunit A | low | > 48 |
| Ralstonia solanacearum GMI1000 | 0.66 | RS_RS18340 | | alkyl hydroperoxide reductase subunit F | 0.76 | RS_RS07905 | | CoA transferase subunit A | low | > 80 |
| Ralstonia solanacearum UW163 | 0.66 | UW163_RS22810 | | alkyl hydroperoxide reductase subunit F | 0.72 | UW163_RS15140 | | CoA transferase subunit A | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.66 | RALBFv3_RS22265 | | alkyl hydroperoxide reductase subunit F | 0.72 | RALBFv3_RS01830 | | CoA transferase subunit A | 0.48 | 64 |
| Klebsiella michiganensis M5al | 0.66 | BWI76_RS07945 | | alkyl hydroperoxide reductase subunit F | 0.40 | BWI76_RS16145 | | 3-oxoadipate CoA-transferase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.66 | ABZR87_RS17240 | | alkyl hydroperoxide reductase subunit F | 0.70 | ABZR87_RS13770 | | CoA transferase subunit A | 0.41 | 64 |
| Ralstonia solanacearum PSI07 | 0.66 | RPSI07_RS00935 | | alkyl hydroperoxide reductase subunit F | 0.72 | RPSI07_RS15660 | | CoA transferase subunit A | low | > 81 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.65 | GFF3915 | | Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) | 0.71 | GFF5197 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | low | > 90 |
| Escherichia coli ECOR38 | 0.65 | HEPCGN_00775 | | Alkyl hydroperoxide reductase subunit F | 0.38 | HEPCGN_22425 | atoD | acetate CoA-transferase subunit alpha | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.65 | OHPLBJKB_03099 | | Alkyl hydroperoxide reductase subunit F | 0.38 | OHPLBJKB_01489 | | Acetate CoA-transferase subunit alpha | low | > 73 |
| Escherichia coli ECOR27 | 0.65 | NOLOHH_23880 | | Alkyl hydroperoxide reductase subunit F | 0.57 | NOLOHH_18990 | atoD | succinyl-CoA--3-ketoacid-CoA transferase | low | > 75 |
| Escherichia coli ECRC62 | 0.65 | BNILDI_21890 | | Alkyl hydroperoxide reductase subunit F | 0.57 | BNILDI_17475 | atoD | succinyl-CoA--3-ketoacid-CoA transferase | low | > 75 |
| Escherichia fergusonii Becca | 0.65 | EFB2_03485 | | Alkyl hydroperoxide reductase subunit F | 0.38 | EFB2_01634 | | Acetate CoA-transferase subunit alpha | low | > 86 |
| Escherichia coli BW25113 | 0.65 | b0606 | ahpF | alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides (VIMSS) | 0.38 | b2221 | atoD | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.65 | ECD_00575 | | alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding | 0.38 | ECD_02148 | | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit | low | > 61 |
| Escherichia coli Nissle 1917 | 0.64 | ECOLIN_RS03325 | | alkyl hydroperoxide reductase subunit F | 0.38 | ECOLIN_RS12970 | | acetate CoA-transferase subunit alpha | — | — |
| Acidovorax sp. GW101-3H11 | 0.64 | Ac3H11_232 | | Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) | 0.71 | Ac3H11_132 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | low | > 79 |
| Enterobacter asburiae PDN3 | 0.64 | EX28DRAFT_2349 | | alkyl hydroperoxide reductase subunit F | 0.60 | EX28DRAFT_1708 | | 3-oxoacid CoA-transferase, A subunit | low | > 76 |
| Enterobacter sp. TBS_079 | 0.63 | MPMX20_01272 | | Alkyl hydroperoxide reductase subunit F | 0.61 | MPMX20_01912 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | low | > 85 |
| Acinetobacter radioresistens SK82 | 0.63 | MPMX26_02013 | | Alkyl hydroperoxide reductase subunit F | 0.74 | MPMX26_02380 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | — | — |
| Shewanella oneidensis MR-1 | 0.62 | SO0956 | ahpF | alkyl hydroperoxide reductase, F subunit (NCBI ptt file) | 0.60 | SO1892 | atoD | acetate CoA-transferase, subunit A (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.61 | Shewana3_3326 | | FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) | 0.59 | Shewana3_1667 | | 3-oxoacid CoA-transferase, A subunit (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.61 | Sama_0618 | | alkyl hydroperoxide reductase, F subunit (RefSeq) | 0.59 | Sama_0518 | | 3-oxoacid CoA-transferase (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.61 | Shew_0793 | | FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) | 0.62 | Shew_2575 | | 3-oxoacid CoA-transferase, A subunit (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.45 | MIT1002_01785 | | NADH dehydrogenase | 0.59 | MIT1002_02001 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.42 | B158DRAFT_0279 | | alkyl hydroperoxide reductase, F subunit | 0.59 | B158DRAFT_2505 | | 3-oxoacid CoA-transferase, A subunit | low | > 40 |
Not shown: 26 genomes with orthologs for Xcc-8004.4222.1 only; 15 genomes with orthologs for Xcc-8004.4478.1 only