Conservation of cofitness between Xcc-8004.4073.1 and Xcc-8004.2931.1 in Xanthomonas campestris pv. campestris strain 8004

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) 1.0 Xcc-8004.2931.1 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.79 11
Lysobacter sp. OAE881 0.82 ABIE51_RS06180 amidophosphoribosyltransferase 0.80 ABIE51_RS13245 phosphoglycerate dehydrogenase low > 62
Dyella japonica UNC79MFTsu3.2 0.73 ABZR86_RS06775 amidophosphoribosyltransferase 0.82 ABZR86_RS09635 phosphoglycerate dehydrogenase 0.93 45
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_05570 purF amidophosphoribosyltransferase 0.78 OKGIIK_10055 serA phosphoglycerate dehydrogenase low > 52
Rhodanobacter denitrificans MT42 0.71 LRK55_RS01105 amidophosphoribosyltransferase 0.80 LRK55_RS02935 phosphoglycerate dehydrogenase low > 63
Rhodanobacter denitrificans FW104-10B01 0.71 LRK54_RS01340 amidophosphoribosyltransferase 0.79 LRK54_RS03185 phosphoglycerate dehydrogenase 0.72 14
Pseudomonas sp. S08-1 0.65 OH686_04420 amidophosphoribosyltransferase 0.63 OH686_11280 D-3-phosphoglycerate dehydrogenase — —
Pseudomonas putida KT2440 0.64 PP_2000 amidophosphoribosyl transferase 0.64 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase 0.28 62
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.64 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) — —
Pseudomonas sp. RS175 0.64 PFR28_02811 Amidophosphoribosyltransferase 0.64 PFR28_04842 D-3-phosphoglycerate dehydrogenase 0.65 12
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS20515 amidophosphoribosyltransferase 0.64 PFLU_RS28695 phosphoglycerate dehydrogenase 0.31 36
Pseudomonas fluorescens SBW25 0.64 PFLU_RS20515 amidophosphoribosyltransferase 0.64 PFLU_RS28695 phosphoglycerate dehydrogenase low > 109
Pseudomonas simiae WCS417 0.64 PS417_18535 amidophosphoribosyltransferase 0.64 PS417_27040 3-phosphoglycerate dehydrogenase — —
Pseudomonas stutzeri RCH2 0.64 Psest_2579 amidophosphoribosyltransferase 0.62 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_20690 amidophosphoribosyltransferase 0.64 AO353_08510 3-phosphoglycerate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.64 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) — —
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_21465 amidophosphoribosyltransferase 0.64 AO356_10300 3-phosphoglycerate dehydrogenase 0.76 35
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) 0.63 B158DRAFT_0518 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_1668 amidophosphoribosyltransferase 0.65 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.86 9
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_1668 amidophosphoribosyltransferase 0.65 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.85 4
Shewanella loihica PV-4 0.62 Shew_2302 amidophosphoribosyltransferase (RefSeq) 0.63 Shew_3196 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.82 25
Marinobacter adhaerens HP15 0.62 HP15_1821 amidophosphoribosyltransferase 0.62 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein — —
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_05115 amidophosphoribosyltransferase 0.61 CSW01_12555 phosphoglycerate dehydrogenase low > 62
Shewanella amazonensis SB2B 0.61 Sama_2146 amidophosphoribosyltransferase (RefSeq) 0.64 Sama_2949 D-3-phosphoglycerate dehydrogenase (RefSeq) low > 62
Erwinia tracheiphila SCR3 0.61 LU632_RS07865 purF amidophosphoribosyltransferase 0.62 LU632_RS05855 serA phosphoglycerate dehydrogenase low > 74
Shewanella sp. ANA-3 0.61 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) 0.63 Shewana3_3416 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.81 66
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.60 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 78
Pantoea sp. MT58 0.61 IAI47_06275 amidophosphoribosyltransferase 0.62 IAI47_03725 phosphoglycerate dehydrogenase 0.75 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_01393 Amidophosphoribosyltransferase 0.61 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase low > 73
Serratia liquefaciens MT49 0.61 IAI46_17810 amidophosphoribosyltransferase 0.62 IAI46_20900 phosphoglycerate dehydrogenase low > 86
Escherichia coli ECRC98 0.61 JDDGAC_26675 purF amidophosphoribosyltransferase 0.61 JDDGAC_23100 serA phosphoglycerate dehydrogenase low > 86
Escherichia coli ECOR38 0.61 HEPCGN_21910 purF amidophosphoribosyltransferase 0.61 HEPCGN_18760 serA phosphoglycerate dehydrogenase 0.70 84
Escherichia coli ECRC102 0.61 NIAGMN_20485 purF amidophosphoribosyltransferase 0.61 NIAGMN_17225 serA phosphoglycerate dehydrogenase — —
Escherichia coli ECRC101 0.61 MCAODC_13755 purF amidophosphoribosyltransferase 0.61 MCAODC_09980 serA phosphoglycerate dehydrogenase low > 87
Escherichia coli Nissle 1917 0.61 ECOLIN_RS13405 amidophosphoribosyltransferase 0.61 ECOLIN_RS16210 phosphoglycerate dehydrogenase — —
Escherichia fergusonii Becca 0.61 EFB2_01546 Amidophosphoribosyltransferase 0.61 EFB2_00990 D-3-phosphoglycerate dehydrogenase low > 86
Escherichia coli ECRC62 0.61 BNILDI_13255 purF amidophosphoribosyltransferase 0.61 BNILDI_09905 serA phosphoglycerate dehydrogenase low > 75
Escherichia coli ECRC100 0.61 OKFHMN_22715 purF amidophosphoribosyltransferase 0.61 OKFHMN_19460 serA phosphoglycerate dehydrogenase low > 80
Escherichia coli ECRC99 0.61 KEDOAH_05480 purF amidophosphoribosyltransferase 0.61 KEDOAH_08680 serA phosphoglycerate dehydrogenase — —
Klebsiella michiganensis M5al 0.60 BWI76_RS20350 amidophosphoribosyltransferase 0.63 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase 0.77 51
Escherichia coli BL21 0.60 ECD_02237 amidophosphoribosyltransferase 0.61 ECD_02744 D-3-phosphoglycerate dehydrogenase low > 61
Escherichia coli BW25113 0.60 b2312 purF amidophosphoribosyltransferase (NCBI) 0.61 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) 0.82 20
Escherichia coli ECOR27 0.60 NOLOHH_14335 purF amidophosphoribosyltransferase 0.61 NOLOHH_11370 serA phosphoglycerate dehydrogenase low > 75
Enterobacter sp. TBS_079 0.60 MPMX20_03247 Amidophosphoribosyltransferase 0.61 MPMX20_03771 D-3-phosphoglycerate dehydrogenase 0.83 42
Shewanella oneidensis MR-1 0.60 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) 0.63 SO0862 serA D-3-phosphoglycerate dehydrogenase (NCBI ptt file) low > 76
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) 0.62 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Rahnella sp. WP5 0.60 EX31_RS19570 amidophosphoribosyltransferase 0.61 EX31_RS21470 phosphoglycerate dehydrogenase 0.85 65
Dickeya dadantii 3937 0.60 DDA3937_RS14435 amidophosphoribosyltransferase 0.61 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.71 26
Acinetobacter radioresistens SK82 0.60 MPMX26_01122 Amidophosphoribosyltransferase 0.61 MPMX26_02773 D-3-phosphoglycerate dehydrogenase 0.88 11
Pectobacterium carotovorum WPP14 0.60 HER17_RS07020 amidophosphoribosyltransferase 0.59 HER17_RS02725 phosphoglycerate dehydrogenase 0.94 23
Dickeya dianthicola 67-19 0.60 HGI48_RS14405 amidophosphoribosyltransferase 0.60 HGI48_RS18400 phosphoglycerate dehydrogenase 0.67 30
Dickeya dianthicola ME23 0.60 DZA65_RS15335 amidophosphoribosyltransferase 0.60 DZA65_RS19540 phosphoglycerate dehydrogenase 0.77 15
Alteromonas macleodii MIT1002 0.59 MIT1002_02524 Amidophosphoribosyltransferase 0.64 MIT1002_02993 D-3-phosphoglycerate dehydrogenase 0.77 66
Castellaniella sp019104865 MT123 0.56 ABCV34_RS04130 amidophosphoribosyltransferase 0.51 ABCV34_RS15150 phosphoglycerate dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS14325 amidophosphoribosyltransferase 0.47 RR42_RS27010 D-3-phosphoglycerate dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.63 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) — —
Acidovorax sp. GW101-3H11 0.54 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.65 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 79
Variovorax sp. OAS795 0.52 ABID97_RS21635 amidophosphoribosyltransferase 0.64 ABID97_RS07235 phosphoglycerate dehydrogenase — —
Variovorax sp. SCN45 0.52 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.65 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 127
Rhodospirillum rubrum S1H 0.30 Rru_A0404 Amidophosphoribosyl transferase (NCBI) 0.61 Rru_A2456 Phosphoglycerate dehydrogenase (NCBI) — —
Bosea sp. OAE506 0.30 ABIE41_RS17810 amidophosphoribosyltransferase 0.53 ABIE41_RS08410 phosphoglycerate dehydrogenase low > 77
Bifidobacterium breve UCC2003 0.30 BBR_RS13380 amidophosphoribosyltransferase 0.45 BBR_RS16970 phosphoglycerate dehydrogenase low > 34
Azospirillum sp. SherDot2 0.30 MPMX19_00906 Amidophosphoribosyltransferase 0.57 MPMX19_00753 D-3-phosphoglycerate dehydrogenase — —
Azospirillum brasilense Sp245 0.29 AZOBR_RS08310 amidophosphoribosyltransferase 0.57 AZOBR_RS10940 3-phosphoglycerate dehydrogenase — —
Rhizobium sp. OAE497 0.28 ABIE40_RS06270 amidophosphoribosyltransferase 0.55 ABIE40_RS30040 phosphoglycerate dehydrogenase low > 107

Not shown: 34 genomes with orthologs for Xcc-8004.4073.1 only; 1 genomes with orthologs for Xcc-8004.2931.1 only