Conservation of cofitness between Xcc-8004.2886.1 and Xcc-8004.2909.1 in Xanthomonas campestris pv. campestris strain 8004

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.2886.1 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) 1.0 Xcc-8004.2909.1 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.34 4
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS10115 chemotaxis protein CheR 0.41 HSERO_RS13965 single-stranded DNA exonuclease low > 78
Dechlorosoma suillum PS 0.54 Dsui_1711 methylase of chemotaxis methyl-accepting protein 0.43 Dsui_2860 single-stranded-DNA-specific exonuclease RecJ — —
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS17405 chemotaxis protein CheR 0.42 RALBFv3_RS14740 single-stranded-DNA-specific exonuclease RecJ low > 76
Ralstonia solanacearum UW163 0.50 UW163_RS21745 chemotaxis protein CheR 0.42 UW163_RS12210 single-stranded-DNA-specific exonuclease RecJ — —
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS17980 CheR family methyltransferase 0.40 ABZR87_RS10395 single-stranded-DNA-specific exonuclease RecJ low > 80
Ralstonia solanacearum PSI07 0.49 RPSI07_RS06240 chemotaxis protein CheR 0.42 RPSI07_RS18620 single-stranded-DNA-specific exonuclease RecJ low > 81
Ralstonia solanacearum GMI1000 0.49 RS_RS23905 chemotaxis protein CheR 0.42 RS_RS05550 single-stranded-DNA-specific exonuclease RecJ low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF1665 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) 0.44 GFF2989 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) low > 78
Rahnella sp. WP5 0.46 EX31_RS11365 protein-glutamate O-methyltransferase CheR 0.45 EX31_RS13470 single-stranded-DNA-specific exonuclease RecJ low > 89
Enterobacter asburiae PDN3 0.45 EX28DRAFT_0672 Methylase of chemotaxis methyl-accepting proteins 0.44 EX28DRAFT_2943 single-stranded-DNA-specific exonuclease RecJ low > 76
Enterobacter sp. TBS_079 0.45 MPMX20_02788 Chemotaxis protein methyltransferase 0.43 MPMX20_03751 Single-stranded-DNA-specific exonuclease RecJ low > 85
Variovorax sp. SCN45 0.44 GFF5765 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) 0.41 GFF6700 Single-stranded-DNA-specific exonuclease RecJ low > 127
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS18980 chemotaxis protein CheR 0.39 BPHYT_RS12730 single-stranded DNA exonuclease low > 109
Escherichia coli Nissle 1917 0.44 ECOLIN_RS10760 protein-glutamate O-methyltransferase CheR 0.44 ECOLIN_RS16115 single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli ECRC100 0.44 OKFHMN_26145 cheR protein-glutamate O-methyltransferase CheR 0.44 OKFHMN_19580 recJ single-stranded-DNA-specific exonuclease RecJ low > 80
Escherichia coli ECRC98 0.44 JDDGAC_00720 cheR protein-glutamate O-methyltransferase CheR 0.44 JDDGAC_23220 recJ single-stranded-DNA-specific exonuclease RecJ low > 86
Escherichia coli ECOR38 0.44 HEPCGN_04565 cheR protein-glutamate O-methyltransferase CheR 0.44 HEPCGN_18870 recJ single-stranded-DNA-specific exonuclease RecJ low > 87
Escherichia coli ECRC102 0.44 NIAGMN_01915 cheR protein-glutamate O-methyltransferase CheR 0.44 NIAGMN_17345 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli ECRC101 0.44 MCAODC_19260 cheR protein-glutamate O-methyltransferase CheR 0.44 MCAODC_10100 recJ single-stranded-DNA-specific exonuclease RecJ low > 87
Escherichia fergusonii Becca 0.44 EFB2_02059 Chemotaxis protein methyltransferase 0.44 EFB2_01009 Single-stranded-DNA-specific exonuclease RecJ low > 86
Escherichia coli ECRC99 0.44 KEDOAH_01960 cheR protein-glutamate O-methyltransferase CheR 0.44 KEDOAH_08560 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli ECOR27 0.44 NOLOHH_16585 cheR protein-glutamate O-methyltransferase CheR 0.44 NOLOHH_11505 recJ single-stranded-DNA-specific exonuclease RecJ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_01844 Chemotaxis protein methyltransferase 0.45 OHPLBJKB_00823 Single-stranded-DNA-specific exonuclease RecJ low > 73
Escherichia coli BW25113 0.44 b1884 cheR chemotaxis regulator, protein-glutamate methyltransferase (NCBI) 0.44 b2892 recJ ssDNA exonuclease, 5' --> 3'-specific (NCBI) low > 76
Escherichia coli ECRC62 0.44 BNILDI_15375 cheR protein-glutamate O-methyltransferase CheR 0.44 BNILDI_10035 recJ single-stranded-DNA-specific exonuclease RecJ low > 75
Escherichia coli BL21 0.44 ECD_01855 chemotaxis regulator, protein-glutamate methyltransferase 0.44 ECD_02724 ssDNA exonuclease, 5 — —
Pantoea sp. MT58 0.43 IAI47_08325 protein-glutamate O-methyltransferase CheR 0.43 IAI47_03830 single-stranded-DNA-specific exonuclease RecJ low > 76
Erwinia tracheiphila SCR3 0.43 LU632_RS13530 cheR protein-glutamate O-methyltransferase CheR 0.43 LU632_RS05985 recJ single-stranded-DNA-specific exonuclease RecJ low > 74
Shewanella sp. ANA-3 0.42 Shewana3_2215 MCP methyltransferase, CheR-type (RefSeq) 0.46 Shewana3_3329 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05745 MCP methyltransferase, CheR-type 0.40 H281DRAFT_00488 exonuclease RecJ low > 103
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS35795 chemotaxis protein CheR 0.42 RR42_RS06090 single-stranded DNA exonuclease low > 128
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS28995 CheR family methyltransferase 0.41 QEN71_RS05835 single-stranded-DNA-specific exonuclease RecJ low > 153
Paraburkholderia graminis OAS925 0.42 ABIE53_000121 chemotaxis protein methyltransferase CheR 0.39 ABIE53_002771 single-stranded-DNA-specific exonuclease low > 113
Acidovorax sp. GW101-3H11 0.42 Ac3H11_1423 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) 0.39 Ac3H11_1746 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) — —
Shewanella oneidensis MR-1 0.41 SO2124 cheR-1 chemotaxis protein methyltransferase CheR (NCBI ptt file) 0.46 SO0952 recJ single-stranded-DNA-specific exonuclease RecJ (NCBI ptt file) low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF1477 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) 0.37 GFF739 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) — —
Pectobacterium carotovorum WPP14 0.41 HER17_RS08115 protein-glutamate O-methyltransferase CheR 0.45 HER17_RS17880 single-stranded-DNA-specific exonuclease RecJ low > 75
Dickeya dadantii 3937 0.41 DDA3937_RS13530 protein-glutamate O-methyltransferase CheR 0.46 DDA3937_RS03310 single-stranded-DNA-specific exonuclease RecJ low > 74
Dickeya dianthicola ME23 0.41 DZA65_RS14060 protein-glutamate O-methyltransferase CheR 0.46 DZA65_RS03495 single-stranded-DNA-specific exonuclease RecJ low > 75
Dickeya dianthicola 67-19 0.41 HGI48_RS13575 protein-glutamate O-methyltransferase CheR 0.46 HGI48_RS03450 single-stranded-DNA-specific exonuclease RecJ low > 71
Serratia liquefaciens MT49 0.39 IAI46_16020 protein-glutamate O-methyltransferase CheR 0.45 IAI46_20720 single-stranded-DNA-specific exonuclease RecJ low > 86
Castellaniella sp019104865 MT123 0.38 ABCV34_RS05820 CheR family methyltransferase 0.39 ABCV34_RS05005 single-stranded-DNA-specific exonuclease RecJ low > 48
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_00444 chemotaxis protein methyltransferase 0.17 CCNA_01450 single-stranded-DNA-specific exonuclease recJ — —
Caulobacter crescentus NA1000 0.37 CCNA_00444 chemotaxis protein methyltransferase 0.17 CCNA_01450 single-stranded-DNA-specific exonuclease recJ — —
Shewanella loihica PV-4 0.34 Shew_0110 MCP methyltransferase, CheR-type (RefSeq) 0.44 Shew_0772 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 60
Rhodanobacter denitrificans MT42 0.34 LRK55_RS13400 protein-glutamate O-methyltransferase 0.20 LRK55_RS18310 DHHA1 domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS13660 protein-glutamate O-methyltransferase 0.47 LRK54_RS00315 single-stranded-DNA-specific exonuclease RecJ 0.20 43
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_19530 Chemotaxis protein methyltransferase 3 0.45 CSW01_12240 single-stranded-DNA-specific exonuclease RecJ low > 62
Shewanella amazonensis SB2B 0.32 Sama_3498 protein-glutamate O-methyltransferase (RefSeq) 0.42 Sama_2737 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 62
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS22215 protein-glutamate O-methyltransferase CheR 0.49 ABZR86_RS02800 single-stranded-DNA-specific exonuclease RecJ low > 74
Rhodospirillum rubrum S1H 0.30 Rru_A1405 MCP methyltransferase, CheR-type (NCBI) 0.19 Rru_A2408 RecJ exonuclease (NCBI) — —
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_02905 Chemotaxis protein methyltransferase 0.46 OKGIIK_06995 recJ single-stranded-DNA-specific exonuclease RecJ low > 52
Agrobacterium fabrum C58 0.29 Atu0518 chemotaxis methyltransferase 0.21 Atu1586 single-stranded-DNA-specific exonuclease — —
Sinorhizobium meliloti 1021 0.29 SMc03009 chemotaxis protein methyltransferase 0.20 SMc00292 single-stranded-DNA-specific exonuclease — —
Rhizobium sp. OAE497 0.28 ABIE40_RS02885 protein-glutamate O-methyltransferase CheR 0.21 ABIE40_RS08655 single-stranded-DNA-specific exonuclease RecJ — —
Azospirillum sp. SherDot2 0.28 MPMX19_01951 Chemotaxis protein methyltransferase 0.21 MPMX19_00667 Single-stranded-DNA-specific exonuclease RecJ — —
Phaeobacter inhibens DSM 17395 0.28 PGA1_262p02100 methyltransferase, cheR type 0.19 PGA1_c08630 single-stranded-DNA-specific exonuclease RecJ — —
Magnetospirillum magneticum AMB-1 0.23 AMB_RS01630 methyltransferase domain-containing protein 0.19 AMB_RS18875 single-stranded-DNA-specific exonuclease RecJ — —
Alteromonas macleodii MIT1002 0.22 MIT1002_01038 Chemotaxis protein methyltransferase 0.41 MIT1002_00788 Single-stranded-DNA-specific exonuclease RecJ low > 70
Kangiella aquimarina DSM 16071 0.18 B158DRAFT_0184 Methylase of chemotaxis methyl-accepting proteins 0.43 B158DRAFT_2268 single-stranded-DNA-specific exonuclease RecJ low > 40

Not shown: 5 genomes with orthologs for Xcc-8004.2886.1 only; 32 genomes with orthologs for Xcc-8004.2909.1 only