Conservation of cofitness between TX73_006195 and TX73_010380 in Rhodopseudomonas palustris CGA009

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_006195 aldehyde dehydrogenase 1.0 TX73_010380 polyamine ABC transporter substrate-binding protein 0.40 11
Sinorhizobium meliloti 1021 0.82 SMc02689 aldehyde dehydrogenase 0.60 SMc00770 putrescine-binding periplasmic protein low > 103
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS00050 aldehyde dehydrogenase family protein 0.44 QEN71_RS07120 polyamine ABC transporter substrate-binding protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.81 H281DRAFT_02299 aldehyde dehydrogenase 0.43 H281DRAFT_05180 putrescine transport system substrate-binding protein low > 103
Burkholderia phytofirmans PsJN 0.81 BPHYT_RS00120 aldehyde dehydrogenase 0.43 BPHYT_RS11450 ABC transporter substrate-binding protein low > 109
Rhizobium sp. OAE497 0.80 ABIE40_RS25730 aldehyde dehydrogenase 0.59 ABIE40_RS03265 polyamine ABC transporter substrate-binding protein low > 107
Xanthomonas campestris pv. campestris strain 8004 0.79 Xcc-8004.135.1 Aldehyde dehydrogenase (EC 1.2.1.3) 0.48 Xcc-8004.2206.1 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 74
Caulobacter crescentus NA1000 0.79 CCNA_03695 aldehyde dehydrogenase 0.22 CCNA_03239 spermidine/putrescine-binding protein low > 66
Caulobacter crescentus NA1000 Δfur 0.79 CCNA_03695 aldehyde dehydrogenase 0.22 CCNA_03239 spermidine/putrescine-binding protein low > 67
Azospirillum sp. SherDot2 0.77 MPMX19_05663 Aldehyde dehydrogenase 0.33 MPMX19_04883 Spermidine-binding periplasmic protein SpuE low > 112
Rhodospirillum rubrum S1H 0.76 Rru_A0931 Aldehyde dehydrogenase (NAD+) (NCBI) 0.44 Rru_A1018 extracellular solute-binding protein, family 1 (NCBI) low > 58
Agrobacterium fabrum C58 0.75 Atu2224 aldehyde dehydrogenase 0.58 Atu0609 ABC transporter, substrate binding protein (putrescine) low > 89
Hydrogenophaga sp. GW460-11-11-14-LB1 0.74 GFF5395 Aldehyde dehydrogenase (EC 1.2.1.3) 0.30 GFF2035 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 90
Shewanella oneidensis MR-1 0.73 SO4480 aldA aldehyde dehydrogenase (NCBI ptt file) 0.48 SO1270 polyamine ABC transporter, periplasmic polyamine-binding protein (NCBI ptt file) low > 76
Acidovorax sp. GW101-3H11 0.72 Ac3H11_4393 Aldehyde dehydrogenase (EC 1.2.1.3) 0.08 Ac3H11_189 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) — —
Dickeya dadantii 3937 0.72 DDA3937_RS20950 aldehyde dehydrogenase 0.50 DDA3937_RS09460 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF423 Aldehyde dehydrogenase B (EC 1.2.1.22) 0.49 GFF758 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 78
Shewanella sp. ANA-3 0.72 Shewana3_0250 aldehyde dehydrogenase (RefSeq) 0.49 Shewana3_3097 extracellular solute-binding protein (RefSeq) low > 73
Escherichia fergusonii Becca 0.72 EFB2_00222 Aldehyde dehydrogenase B 0.51 EFB2_03207 Putrescine-binding periplasmic protein low > 86
Dickeya dianthicola ME23 0.72 DZA65_RS00295 aldehyde dehydrogenase 0.49 DZA65_RS09790 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 75
Escherichia coli Nissle 1917 0.72 ECOLIN_RS26555 aldehyde dehydrogenase AldB 0.51 ECOLIN_RS04550 spermidine/putrescine ABC transporter substrate-binding protein PotF — —
Escherichia coli ECRC62 0.72 BNILDI_03775 aldB aldehyde dehydrogenase AldB 0.51 BNILDI_20585 potF spermidine/putrescine ABC transporter substrate-binding protein PotF low > 75
Escherichia coli ECOR27 0.72 NOLOHH_07755 aldB aldehyde dehydrogenase AldB 0.51 NOLOHH_22330 potF spermidine/putrescine ABC transporter substrate-binding protein PotF low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_00115 Aldehyde dehydrogenase B 0.51 OHPLBJKB_02814 Putrescine-binding periplasmic protein low > 73
Dickeya dianthicola 67-19 0.72 HGI48_RS00300 aldehyde dehydrogenase 0.49 HGI48_RS09480 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 71
Escherichia coli ECOR38 0.72 HEPCGN_14700 aldB aldehyde dehydrogenase AldB 0.51 HEPCGN_02070 potF spermidine/putrescine ABC transporter substrate-binding protein PotF low > 87
Escherichia coli ECRC101 0.71 MCAODC_06380 aldB aldehyde dehydrogenase AldB 0.51 MCAODC_25175 potF spermidine/putrescine ABC transporter substrate-binding protein PotF low > 87
Escherichia coli BW25113 0.71 b3588 aldB aldehyde dehydrogenase B (lactaldehyde dehydrogenase) (VIMSS) 0.51 b0854 potF putrescine transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) low > 76
Escherichia coli ECRC99 0.71 KEDOAH_12285 aldB aldehyde dehydrogenase AldB 0.51 KEDOAH_21950 potF spermidine/putrescine ABC transporter substrate-binding protein PotF — —
Escherichia coli ECRC102 0.71 NIAGMN_13625 aldB aldehyde dehydrogenase AldB 0.51 NIAGMN_04005 potF spermidine/putrescine ABC transporter substrate-binding protein PotF — —
Escherichia coli ECRC100 0.71 OKFHMN_15865 aldB aldehyde dehydrogenase AldB 0.51 OKFHMN_05960 potF spermidine/putrescine ABC transporter substrate-binding protein PotF low > 80
Escherichia coli ECRC98 0.71 JDDGAC_19495 aldB aldehyde dehydrogenase AldB 0.51 JDDGAC_09595 potF spermidine/putrescine ABC transporter substrate-binding protein PotF low > 86
Enterobacter asburiae PDN3 0.71 EX28DRAFT_3843 NAD-dependent aldehyde dehydrogenases 0.50 EX28DRAFT_2099 Spermidine/putrescine-binding periplasmic protein low > 76
Escherichia coli BL21 0.71 ECD_03443 aldehyde dehydrogenase B 0.51 ECD_00859 putrescine ABC transporter periplasmic binding protein low > 61
Shewanella loihica PV-4 0.71 Shew_3574 aldehyde dehydrogenase (RefSeq) 0.47 Shew_0973 extracellular solute-binding protein (RefSeq) low > 60
Enterobacter sp. TBS_079 0.71 MPMX20_00142 Aldehyde dehydrogenase B 0.50 MPMX20_01495 Putrescine-binding periplasmic protein low > 85
Pectobacterium carotovorum WPP14 0.71 HER17_RS21100 aldehyde dehydrogenase 0.49 HER17_RS12500 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 75
Castellaniella sp019104865 MT123 0.70 ABCV34_RS02705 aldehyde dehydrogenase family protein 0.43 ABCV34_RS02360 polyamine ABC transporter substrate-binding protein low > 48
Marinobacter adhaerens HP15 0.70 HP15_3144 Aldehyde dehydrogenase (EC 1.2.1.3) (from data) 0.45 HP15_940 putrescine ABC transporter, periplasmic putrescine-binding protein low > 73
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_0629 Aldehyde dehydrogenase (NAD+) 0.47 Psyr_4864 extracellular solute-binding protein, family 1 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_0629 Aldehyde dehydrogenase (NAD+) 0.47 Psyr_4864 extracellular solute-binding protein, family 1 low > 86
Shewanella amazonensis SB2B 0.70 Sama_3435 aldehyde dehydrogenase (RefSeq) 0.48 Sama_2642 polyamine ABC transporter, periplasmic polyamine-binding protein (RefSeq) low > 62
Pseudomonas simiae WCS417 0.70 PS417_24810 aldehyde dehydrogenase 0.49 PS417_27120 ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_1381 Aldehyde dehydrogenase (EC 1.2.1.3) 0.49 Pf6N2E2_4514 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 103
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_06560 aldehyde dehydrogenase 0.48 AO353_08575 ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_15225 aldehyde dehydrogenase 0.49 AO356_13160 putrescine ABC transporter, substrate-binding component (from data) low > 104
Rahnella sp. WP5 0.69 EX31_RS05750 aldehyde dehydrogenase 0.52 EX31_RS09630 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 89
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS26745 aldehyde dehydrogenase 0.49 PFLU_RS28770 polyamine ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.69 PFLU_RS26745 aldehyde dehydrogenase 0.49 PFLU_RS28770 polyamine ABC transporter substrate-binding protein low > 109
Pseudomonas stutzeri RCH2 0.69 Psest_2276 Aldehyde dehydrogenase (EC 1.2.1.3) (from data) 0.52 Psest_4284 Spermidine/putrescine-binding periplasmic protein low > 67
Pseudomonas sp. RS175 0.69 PFR28_01819 Aldehyde dehydrogenase 0.50 PFR28_04294 Spermidine-binding periplasmic protein SpuE low > 88
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_2673 Aldehyde dehydrogenase (EC 1.2.1.3) 0.48 Pf1N1B4_2260 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 87
Pseudomonas putida KT2440 0.69 PP_0545 aldehyde dehydrogenase 0.49 PP_5180 spermidine/putrescine ABC transporter - periplasmic subunit low > 96
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_1342 Aldehyde dehydrogenase (EC 1.2.1.3) 0.48 PfGW456L13_929 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 87
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_09120 aldehyde dehydrogenase 0.26 CSW01_07140 spermidine/putrescine ABC transporter substrate-binding protein low > 62
Klebsiella michiganensis M5al 0.69 BWI76_RS21985 acetaldehyde dehydrogenase (EC 1.2.1.3) (from data) 0.50 BWI76_RS09460 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 92
Serratia liquefaciens MT49 0.68 IAI46_12315 aldehyde dehydrogenase 0.48 IAI46_08370 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 86
Pantoea sp. MT58 0.67 IAI47_11705 aldehyde dehydrogenase 0.49 IAI47_13045 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 76
Fusobacterium nucleatum SB010 0.46 HUW76_07885 aldehyde dehydrogenase family protein 0.19 HUW76_06130 extracellular solute-binding protein low > 35
Pseudomonas sp. S08-1 0.33 OH686_13645 Aldehyde dehydrogenase 0.52 OH686_11465 Putrescine ABC transporter putrescine-binding protein PotF low > 80
Phaeobacter inhibens DSM 17395 0.31 PGA1_c21670 betaine aldehyde dehydrogenase BetB 0.50 PGA1_c34420 putrescine-binding periplasmic protein PotF low > 62
Bosea sp. OAE506 0.28 ABIE41_RS10655 aldehyde dehydrogenase family protein 0.53 ABIE41_RS21650 polyamine ABC transporter substrate-binding protein low > 77

Not shown: 21 genomes with orthologs for TX73_006195 only; 8 genomes with orthologs for TX73_010380 only