Conservation of cofitness between Rv1323 and Rv2976c in Mycobacterium tuberculosis H37Rv

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Mycobacterium tuberculosis H37Rv 1.0 Rv1323 Probable acetyl-CoA acetyltransferase FadA4 (acetoacetyl-CoA thiolase) 1.0 Rv2976c Probable uracil-DNA glycosylase Ung (UDG) low > 58
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS22200 acetyl-CoA C-acetyltransferase 0.35 QEN71_RS27575 uracil-DNA glycosylase
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_27945 acetyl-CoA acetyltransferase 0.40 AO353_17560 uracil-DNA glycosylase low > 101
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_2113 Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.40 Pf6N2E2_2772 Uracil-DNA glycosylase, family 1 low > 103
Pseudomonas sp. RS175 0.45 PFR28_01323 Acetyl-CoA acetyltransferase 0.41 PFR28_00677 Uracil-DNA glycosylase low > 88
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_21640 acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] (from data) 0.40 AO356_04635 uracil-DNA glycosylase low > 104
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_0824 acetyl-CoA acetyltransferase 0.40 Psyr_3970 Uracil-DNA glycosylase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_0824 acetyl-CoA acetyltransferase 0.40 Psyr_3970 Uracil-DNA glycosylase low > 86
Marinobacter adhaerens HP15 0.43 HP15_5 acetyl-CoA acetyltransferase 0.38 HP15_769 uracil-DNA glycosylase low > 73
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_5835 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.40 Pf1N1B4_3309 Uracil-DNA glycosylase, family 1 low > 87
Pseudomonas fluorescens SBW25 0.43 PFLU_RS10575 acetyl-CoA C-acetyltransferase 0.38 PFLU_RS07110 uracil-DNA glycosylase 0.57 7
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS07610 acetyl-CoA acetyltransferase 0.35 RR42_RS18320 uracil-DNA glycosylase
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS10575 acetyl-CoA C-acetyltransferase 0.38 PFLU_RS07110 uracil-DNA glycosylase low > 109
Pseudomonas simiae WCS417 0.43 PS417_10515 acetyl-CoA acetyltransferase 0.38 PS417_07035 uracil-DNA glycosylase low > 88
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF4796 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.34 GFF3112 Uracil-DNA glycosylase, family 1
Pseudomonas sp. S08-1 0.42 OH686_17215 Acetyl-CoA acetyltransferase 0.41 OH686_05820 uracil-DNA glycosylase low > 80
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS13295 acetyl-CoA C-acetyltransferase 0.34 ABZR87_RS02170 uracil-DNA glycosylase
Ralstonia solanacearum PSI07 0.42 RPSI07_RS15990 acetyl-CoA C-acetyltransferase 0.33 RPSI07_RS10725 uracil-DNA glycosylase
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_2511 acetyl-CoA acetyltransferases 0.40 B158DRAFT_1441 Uracil-DNA glycosylase (EC 3.2.2.-) low > 40
Ralstonia solanacearum UW163 0.41 UW163_RS14810 acetyl-CoA C-acetyltransferase 0.32 UW163_RS07110 uracil-DNA glycosylase
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS01500 acetyl-CoA C-acetyltransferase 0.32 RALBFv3_RS06515 uracil-DNA glycosylase
Pseudomonas putida KT2440 0.41 PP_4636 acetyl-CoA acetyltransferase 0.40 PP_1413 Uracil-DNA glycosylase low > 96
Echinicola vietnamensis KMM 6221, DSM 17526 0.41 Echvi_3705 acetyl-CoA acetyltransferases 0.38 Echvi_2393 uracil-DNA glycosylase low > 79
Enterobacter asburiae PDN3 0.41 EX28DRAFT_1710 acetyl-CoA acetyltransferases 0.32 EX28DRAFT_0067 Uracil-DNA glycosylase (EC 3.2.2.-) low > 76
Enterobacter sp. TBS_079 0.41 MPMX20_01910 Acetyl-CoA acetyltransferase 0.31 MPMX20_03449 Uracil-DNA glycosylase low > 85
Escherichia coli ECRC62 0.40 BNILDI_17485 succinyl-CoA--3-ketoacid-CoA transferase 0.31 BNILDI_11815 ung uracil-DNA glycosylase low > 75
Escherichia coli ECOR27 0.40 NOLOHH_19000 succinyl-CoA--3-ketoacid-CoA transferase 0.31 NOLOHH_13010 ung uracil-DNA glycosylase low > 75
Pseudomonas stutzeri RCH2 0.40 Psest_1076 acetyl-CoA acetyltransferases 0.40 Psest_3107 uracil-DNA glycosylase low > 67
Escherichia coli Nissle 1917 0.40 ECOLIN_RS15960 acetyl-CoA C-acetyltransferase 0.31 ECOLIN_RS14600 uracil-DNA glycosylase low > 55
Alteromonas macleodii MIT1002 0.40 MIT1002_01671 Acetyl-CoA acetyltransferase 0.34 MIT1002_03083 Uracil-DNA glycosylase low > 70
Escherichia fergusonii Becca 0.40 EFB2_01039 Acetyl-CoA acetyltransferase 0.31 EFB2_01316 Uracil-DNA glycosylase low > 86
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_11830 acetyl-CoA acetyltransferase 0.39 CA264_04730 uracil-DNA glycosylase low > 74
Escherichia coli BW25113 0.39 b2844 yqeF putative acyltransferase (VIMSS) 0.31 b2580 ung uracil-DNA glycosylase (NCBI) low > 76
Escherichia coli BL21 0.39 ECD_02692 short chain acyltransferase 0.31 ECD_02474 uracil-DNA-glycosylase low > 61
Bosea sp. OAE506 0.39 ABIE41_RS08710 acetyl-CoA C-acetyltransferase 0.39 ABIE41_RS05980 uracil-DNA glycosylase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00885 Acetyl-CoA acetyltransferase 0.31 OHPLBJKB_01126 Uracil-DNA glycosylase low > 73
Sphingomonas koreensis DSMZ 15582 0.39 Ga0059261_0982 acetyl-CoA acetyltransferases 0.37 Ga0059261_2524 Uracil-DNA glycosylase (EC 3.2.2.-) low > 68
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF1330 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.31 GFF2100 Uracil-DNA glycosylase, family 1 low > 78
Klebsiella michiganensis M5al 0.39 BWI76_RS23445 acetyl-CoA acetyltransferase 0.32 BWI76_RS21380 uracil-DNA glycosylase low > 92
Escherichia coli ECRC98 0.39 JDDGAC_23580 yqeF putative acetyl-CoA acetyltransferase 0.31 JDDGAC_25005 ung uracil-DNA glycosylase low > 86
Escherichia coli ECRC102 0.39 NIAGMN_17685 yqeF putative acetyl-CoA acetyltransferase 0.31 NIAGMN_19110 ung uracil-DNA glycosylase
Escherichia coli ECRC101 0.39 MCAODC_10440 yqeF putative acetyl-CoA acetyltransferase 0.31 MCAODC_11870 ung uracil-DNA glycosylase low > 87
Escherichia coli ECRC100 0.39 OKFHMN_19915 yqeF putative acetyl-CoA acetyltransferase 0.31 OKFHMN_21340 ung uracil-DNA glycosylase low > 80
Escherichia coli ECRC99 0.39 KEDOAH_08215 yqeF putative acetyl-CoA acetyltransferase 0.31 KEDOAH_06880 ung uracil-DNA glycosylase
Lysobacter sp. OAE881 0.39 ABIE51_RS13145 acetyl-CoA C-acyltransferase 0.39 ABIE51_RS02100 uracil-DNA glycosylase low > 62
Escherichia coli ECOR38 0.39 HEPCGN_19595 yqeF putative acetyl-CoA acetyltransferase 0.31 HEPCGN_20465 ung uracil-DNA glycosylase low > 87
Sinorhizobium meliloti 1021 0.38 SMa1450 thiolase 0.41 SMc03195 uracil-DNA glycosylase low > 103
Rhizobium sp. OAE497 0.38 ABIE40_RS18690 acetyl-CoA C-acetyltransferase 0.40 ABIE40_RS14835 uracil-DNA glycosylase low > 107
Shewanella loihica PV-4 0.38 Shew_1667 acetyl-CoA acetyltransferase (RefSeq) 0.39 Shew_3073 uracil-DNA glycosylase (RefSeq) low > 60
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS08010 acetyl-CoA C-acyltransferase 0.41 ABZR88_RS00735 uracil-DNA glycosylase low > 71
Shewanella oneidensis MR-1 0.38 SO1677 atoB 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) (from data) 0.36 SO3654 ung uracil-DNA glycosylase (NCBI ptt file) low > 76
Agrobacterium fabrum C58 0.38 Atu2769 acetyl-CoA acetyltransferase; poly-beta-hydroxybutyrate biosynthesis 0.40 Atu2455 uracil-DNA glycosylase low > 89
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS06590 acetyl-CoA acetyltransferase 0.41 CA265_RS10890 uracil-DNA glycosylase low > 88
Shewanella sp. ANA-3 0.37 Shewana3_2771 acetyl-CoA acetyltransferases (RefSeq) 0.38 Shewana3_3221 uracil-DNA glycosylase (RefSeq) low > 73
Acinetobacter radioresistens SK82 0.37 MPMX26_02383 Acetyl-CoA acetyltransferase 0.38 MPMX26_01231 Uracil-DNA glycosylase low > 36
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS20570 acetyl-CoA C-acyltransferase 0.40 ABZR86_RS12580 uracil-DNA glycosylase low > 74
Phaeobacter inhibens DSM 17395 0.37 PGA1_c03400 acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) (from data) 0.36 PGA1_c16900 uracil-DNA glycosylase Ung low > 62
Shewanella amazonensis SB2B 0.37 Sama_1375 Acetyl-CoA C-acetyltransferase (RefSeq) 0.38 Sama_2831 uracil-DNA glycosylase (RefSeq)
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_2982 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (from data) 0.39 PfGW456L13_4530 Uracil-DNA glycosylase, family 1 low > 87
Fusobacterium nucleatum SB010 0.36 HUW76_07570 acetyl-CoA C-acetyltransferase 0.38 HUW76_04110 uracil-DNA glycosylase low > 35
Rhodanobacter denitrificans MT42 0.35 LRK55_RS14980 acetyl-CoA C-acyltransferase 0.41 LRK55_RS10645 uracil-DNA glycosylase low > 63
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_04025 paaJ acetyl-CoA C-acyltransferase 0.41 OKGIIK_12930 ung uracil-DNA glycosylase low > 52
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS15265 acetyl-CoA C-acyltransferase 0.41 LRK54_RS10940 uracil-DNA glycosylase low > 59
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.3647.1 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.38 Xcc-8004.4773.1 Uracil-DNA glycosylase, family 1 low > 74

Not shown: 19 genomes with orthologs for Rv1323 only; 17 genomes with orthologs for Rv2976c only