Conservation of cofitness between RR42_RS16225 and RR42_RS17110 in Cupriavidus basilensis FW507-4G11

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS16225 cytosol aminopeptidase 1.0 RR42_RS17110 ATP-dependent Clp protease adapter protein ClpS 0.53 2
Ralstonia solanacearum PSI07 0.78 RPSI07_RS12825 leucyl aminopeptidase 0.93 RPSI07_RS12570 ATP-dependent Clp protease adaptor ClpS 0.44 67
Ralstonia solanacearum GMI1000 0.77 RS_RS12120 cytosol aminopeptidase 0.93 RS_RS12375 ATP-dependent Clp protease adaptor ClpS low > 80
Ralstonia sp. UNC404CL21Col 0.76 ABZR87_RS00150 leucyl aminopeptidase 0.93 ABZR87_RS00440 ATP-dependent Clp protease adapter ClpS low > 80
Ralstonia solanacearum UW163 0.75 UW163_RS09120 leucyl aminopeptidase 0.93 UW163_RS08855 ATP-dependent Clp protease adaptor ClpS — —
Ralstonia solanacearum IBSBF1503 0.75 RALBFv3_RS04550 leucyl aminopeptidase 0.93 RALBFv3_RS04815 ATP-dependent Clp protease adaptor ClpS 0.74 2
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS25205 leucyl aminopeptidase 0.80 QEN71_RS03000 ATP-dependent Clp protease adapter ClpS low > 153
Paraburkholderia graminis OAS925 0.66 ABIE53_001235 leucyl aminopeptidase 0.81 ABIE53_003307 ATP-dependent Clp protease adaptor protein ClpS low > 113
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS04795 cytosol aminopeptidase 0.81 BPHYT_RS15715 ATP-dependent Clp protease adapter protein ClpS low > 109
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_00123 aminopeptidase A. Metallo peptidase. MEROPS family M17 0.81 H281DRAFT_04083 ATP-dependent Clp protease adaptor protein ClpS 0.26 78
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS15600 cytosol aminopeptidase 0.76 HSERO_RS07025 ATP-dependent Clp protease ClpS low > 78
Dechlorosoma suillum PS 0.51 Dsui_3536 leucyl aminopeptidase 0.62 Dsui_0008 hypothetical protein low > 51
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_12680 cytosol aminopeptidase 0.52 CSW01_05800 ATP-dependent Clp protease adaptor ClpS low > 62
Shewanella amazonensis SB2B 0.48 Sama_0795 leucyl aminopeptidase (RefSeq) 0.48 Sama_2057 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) low > 62
Erwinia tracheiphila SCR3 0.47 LU632_RS20855 pepA leucyl aminopeptidase 0.51 LU632_RS09700 clpS ATP-dependent Clp protease adapter ClpS low > 74
Shewanella loihica PV-4 0.47 Shew_0939 leucyl aminopeptidase (RefSeq) 0.49 Shew_1565 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) — —
Shewanella sp. ANA-3 0.47 Shewana3_3006 leucyl aminopeptidase (RefSeq) 0.50 Shewana3_1752 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) — —
Shewanella oneidensis MR-1 0.47 SO1368 pepA-2 cytosol aminopeptidase (NCBI ptt file) 0.50 SO2627 conserved hypothetical protein (NCBI ptt file) low > 76
Pantoea sp. MT58 0.47 IAI47_16795 leucyl aminopeptidase 0.51 IAI47_12950 ATP-dependent Clp protease adapter ClpS 0.69 1
Alteromonas macleodii MIT1002 0.46 MIT1002_03197 Cytosol aminopeptidase 0.51 MIT1002_01833 ATP-dependent Clp protease adapter protein ClpS low > 70
Escherichia coli ECRC98 0.46 JDDGAC_15430 pepA leucyl aminopeptidase 0.54 JDDGAC_09425 clpS ATP-dependent Clp protease adapter ClpS low > 86
Escherichia coli BW25113 0.46 b4260 pepA leucyl aminopeptidase (NCBI) 0.54 b0881 clpS ATP-dependent Clp protease adaptor protein ClpS (NCBI) low > 76
Escherichia coli BL21 0.46 ECD_04126 multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site-specific recombination factor 0.54 ECD_00886 regulatory protein for ClpA substrate specificity low > 61
Escherichia coli ECRC102 0.46 NIAGMN_09640 pepA leucyl aminopeptidase 0.54 NIAGMN_03830 clpS ATP-dependent Clp protease adapter ClpS — —
Kangiella aquimarina DSM 16071 0.46 B158DRAFT_1167 Leucyl aminopeptidase 0.50 B158DRAFT_1504 Uncharacterized conserved protein 0.78 1
Escherichia coli ECRC101 0.46 MCAODC_02295 pepA leucyl aminopeptidase 0.54 MCAODC_25005 clpS ATP-dependent Clp protease adapter ClpS low > 87
Escherichia fergusonii Becca 0.46 EFB2_04275 Cytosol aminopeptidase 0.54 EFB2_03180 ATP-dependent Clp protease adapter protein ClpS low > 86
Enterobacter asburiae PDN3 0.46 EX28DRAFT_3267 Leucyl aminopeptidase 0.55 EX28DRAFT_2051 Uncharacterized conserved protein 0.62 69
Escherichia coli ECOR27 0.46 NOLOHH_04055 pepA leucyl aminopeptidase 0.54 NOLOHH_22185 clpS ATP-dependent Clp protease adapter ClpS low > 75
Escherichia coli ECRC99 0.46 KEDOAH_16360 pepA leucyl aminopeptidase 0.54 KEDOAH_22120 clpS ATP-dependent Clp protease adapter ClpS — —
Escherichia coli ECRC100 0.46 OKFHMN_11790 pepA leucyl aminopeptidase 0.54 OKFHMN_05790 clpS ATP-dependent Clp protease adapter ClpS low > 80
Escherichia coli ECRC62 0.46 BNILDI_07455 pepA leucyl aminopeptidase 0.54 BNILDI_20440 clpS ATP-dependent Clp protease adapter ClpS low > 75
Escherichia coli Nissle 1917 0.46 ECOLIN_RS24695 leucyl aminopeptidase 0.54 ECOLIN_RS04690 ATP-dependent Clp protease adapter ClpS low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_03776 Cytosol aminopeptidase 0.54 OHPLBJKB_02787 ATP-dependent Clp protease adapter protein ClpS low > 73
Escherichia coli ECOR38 0.46 HEPCGN_09980 pepA leucyl aminopeptidase 0.54 HEPCGN_22895 clpS ATP-dependent Clp protease adapter ClpS low > 87
Dickeya dianthicola 67-19 0.46 HGI48_RS01955 leucyl aminopeptidase 0.53 HGI48_RS09570 ATP-dependent Clp protease adapter ClpS low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS02060 leucyl aminopeptidase 0.53 DZA65_RS09880 ATP-dependent Clp protease adapter ClpS low > 75
Enterobacter sp. TBS_079 0.46 MPMX20_04118 Cytosol aminopeptidase 0.55 MPMX20_01543 ATP-dependent Clp protease adapter protein ClpS low > 85
Serratia liquefaciens MT49 0.46 IAI46_02360 leucyl aminopeptidase 0.52 IAI46_08510 ATP-dependent Clp protease adapter ClpS low > 86
Dickeya dadantii 3937 0.46 DDA3937_RS01995 leucyl aminopeptidase 0.53 DDA3937_RS09555 ATP-dependent Clp protease adapter ClpS low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF949 Cytosol aminopeptidase PepA (EC 3.4.11.1) 0.53 GFF4902 ATP-dependent Clp protease adaptor protein ClpS low > 78
Klebsiella michiganensis M5al 0.45 BWI76_RS03040 leucyl aminopeptidase 0.55 BWI76_RS09610 ATP-dependent Clp protease adaptor ClpS low > 92
Rahnella sp. WP5 0.45 EX31_RS04385 leucyl aminopeptidase 0.51 EX31_RS18565 ATP-dependent Clp protease adapter ClpS low > 89
Pectobacterium carotovorum WPP14 0.45 HER17_RS19450 leucyl aminopeptidase 0.51 HER17_RS12405 ATP-dependent Clp protease adapter ClpS low > 75
Lysobacter sp. OAE881 0.42 ABIE51_RS04475 leucyl aminopeptidase 0.47 ABIE51_RS11495 ATP-dependent Clp protease adapter ClpS 0.96 2
Acidovorax sp. GW101-3H11 0.41 Ac3H11_2399 Cytosol aminopeptidase PepA (EC 3.4.11.1) 0.62 Ac3H11_2457 ATP-dependent Clp protease adaptor protein ClpS low > 79
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_11560 pepB leucyl aminopeptidase 0.47 OKGIIK_06885 clpS ATP-dependent Clp protease adapter ClpS low > 52
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS19105 leucyl aminopeptidase 0.49 ABZR86_RS02195 ATP-dependent Clp protease adapter ClpS 0.39 43
Rhodanobacter denitrificans MT42 0.39 LRK55_RS12110 leucyl aminopeptidase 0.48 LRK55_RS00165 ATP-dependent Clp protease adapter ClpS low > 63
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS12375 leucyl aminopeptidase 0.48 LRK54_RS00425 ATP-dependent Clp protease adapter ClpS low > 59
Magnetospirillum magneticum AMB-1 0.33 AMB_RS18600 leucyl aminopeptidase 0.49 AMB_RS05700 ATP-dependent Clp protease adapter ClpS — —
Azospirillum brasilense Sp245 0.30 AZOBR_RS16385 aminopeptidase A 0.48 AZOBR_RS05180 Clp protease ClpS — —
Rhodopseudomonas palustris CGA009 0.28 TX73_015830 leucyl aminopeptidase 0.48 TX73_016275 ATP-dependent Clp protease adapter ClpS low > 86
Bosea sp. OAE506 0.28 ABIE41_RS17710 leucyl aminopeptidase 0.48 ABIE41_RS18240 ATP-dependent Clp protease adapter ClpS low > 77
Azospirillum sp. SherDot2 0.28 MPMX19_01593 Cytosol aminopeptidase 0.53 MPMX19_00504 ATP-dependent Clp protease adapter protein ClpS low > 112
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_0875 Leucyl aminopeptidase 0.49 Ga0059261_1285 Uncharacterized conserved protein low > 68
Desulfovibrio vulgaris Miyazaki F 0.27 DvMF_1538 Leucyl aminopeptidase (RefSeq) 0.44 DvMF_0459 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) low > 51

Not shown: 24 genomes with orthologs for RR42_RS16225 only; 6 genomes with orthologs for RR42_RS17110 only