Conservation of cofitness between RR42_RS37475 and RR42_RS13910 in Cupriavidus basilensis FW507-4G11

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS37475 peptide chain release factor 3 1.0 RR42_RS13910 glutamate racemase 0.45 7
Ralstonia solanacearum PSI07 0.87 RPSI07_RS07810 peptide chain release factor 3 0.61 RPSI07_RS14860 glutamate racemase low > 81
Ralstonia solanacearum GMI1000 0.87 RS_RS25080 peptide chain release factor 3 0.62 RS_RS09835 glutamate racemase low > 80
Ralstonia solanacearum IBSBF1503 0.87 RALBFv3_RS23345 peptide chain release factor 3 0.58 RALBFv3_RS02465 glutamate racemase low > 76
Ralstonia solanacearum UW163 0.87 UW163_RS16595 peptide chain release factor 3 0.58 UW163_RS11260 glutamate racemase — —
Ralstonia sp. UNC404CL21Col 0.87 ABZR87_RS23485 peptide chain release factor 3 0.60 ABZR87_RS14380 glutamate racemase low > 80
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS14640 peptide chain release factor 3 0.39 HSERO_RS07755 glutamate racemase low > 78
Kangiella aquimarina DSM 16071 0.65 B158DRAFT_2239 peptide chain release factor 3 0.39 B158DRAFT_0228 glutamate racemase (EC 5.1.1.3) — —
Pseudomonas stutzeri RCH2 0.62 Psest_3351 peptide chain release factor 3 0.41 Psest_1116 glutamate racemase — —
Pseudomonas sp. S08-1 0.62 OH686_08765 peptide chain release factor 3 0.46 OH686_07895 glutamate racemase — —
Shewanella sp. ANA-3 0.62 Shewana3_1037 prfC peptide chain release factor 3 (RefSeq) 0.29 Shewana3_0180 glutamate racemase (RefSeq) — —
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_5060 Peptide chain release factor 3 0.44 PfGW456L13_1585 Glutamate racemase (EC 5.1.1.3) — —
Pseudomonas putida KT2440 0.62 PP_0872 Peptide chain release factor 3 0.42 PP_0736 Glutamate racemase — —
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_07285 peptide chain release factor 3 0.45 AO356_16510 glutamate racemase — —
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_05420 peptide chain release factor 3 0.43 AO353_14800 glutamate racemase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF1035 Peptide chain release factor 3 0.26 GFF2353 Glutamate racemase (EC 5.1.1.3) — —
Pseudomonas simiae WCS417 0.62 PS417_04030 peptide chain release factor 3 0.44 PS417_03620 glutamate racemase — —
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_4253 bacterial peptide chain release factor 3 (bRF-3) 0.42 Psyr_0952 glutamate racemase — —
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_3327 Peptide chain release factor 3 0.45 Pf6N2E2_5224 Glutamate racemase (EC 5.1.1.3) — —
Shewanella amazonensis SB2B 0.62 Sama_0968 prfC peptide chain release factor 3 (RefSeq) 0.26 Sama_0194 glutamate racemase (RefSeq) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_4253 bacterial peptide chain release factor 3 (bRF-3) 0.42 Psyr_0952 glutamate racemase — —
Pseudomonas sp. RS175 0.62 PFR28_00118 Peptide chain release factor RF3 0.45 PFR28_03652 Glutamate racemase 2 — —
Pseudomonas fluorescens SBW25 0.62 PFLU_RS04070 peptide chain release factor 3 0.44 PFLU_RS03670 glutamate racemase — —
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS04070 peptide chain release factor 3 0.44 PFLU_RS03670 glutamate racemase — —
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_03470 peptide chain release factor 3 0.25 CSW01_00800 glutamate racemase — —
Acinetobacter radioresistens SK82 0.60 MPMX26_00476 Peptide chain release factor RF3 0.35 MPMX26_00293 Glutamate racemase — —
Desulfovibrio vulgaris Hildenborough JW710 0.59 DVU3116 prfC peptide chain release factor 3 (TIGR) 0.27 DVU0768 murI glutamate racemase (TIGR) — —
Azospirillum brasilense Sp245 0.57 AZOBR_RS14730 peptide chain release factor 3 0.22 AZOBR_RS08075 glutamate racemase — —
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_03538 bacterial peptide chain release factor 3 (bRF-3) 0.54 H281DRAFT_04958 glutamate racemase low > 103
Paraburkholderia graminis OAS925 0.57 ABIE53_004717 peptide chain release factor 3 0.54 ABIE53_001660 glutamate racemase low > 113
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS17200 peptide chain release factor 3 0.56 QEN71_RS23790 glutamate racemase — —
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS34275 peptide chain release factor 3 0.54 BPHYT_RS06975 glutamate racemase low > 109
Azospirillum sp. SherDot2 0.55 MPMX19_01192 Peptide chain release factor 3 0.16 MPMX19_01787 Glutamate racemase — —
Variovorax sp. SCN45 0.54 GFF2045 Peptide chain release factor 3 0.33 GFF484 Glutamate racemase (EC 5.1.1.3) — —
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_1130 Peptide chain release factor 3 0.44 Pf1N1B4_2922 Glutamate racemase (EC 5.1.1.3) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.52 Echvi_0584 peptide chain release factor 3 0.24 Echvi_4654 glutamate racemase low > 79
Parabacteroides merdae CL09T00C40 0.51 HMPREF1078_RS04145 peptide chain release factor 3 0.25 HMPREF1078_RS11250 glutamate racemase — —
Phaeobacter inhibens DSM 17395 0.51 PGA1_c10620 peptide chain release factor 3 0.17 PGA1_c17060 putative glutamate racemase — —
Rhizobium sp. OAE497 0.51 ABIE40_RS01450 peptide chain release factor 3 0.20 ABIE40_RS10265 glutamate racemase low > 107
Bosea sp. OAE506 0.51 ABIE41_RS06180 peptide chain release factor 3 0.17 ABIE41_RS13570 glutamate racemase low > 77
Agrobacterium fabrum C58 0.50 Atu0315 peptide chain release factor 3 0.22 Atu1867 glutamate racemase — —
Dinoroseobacter shibae DFL-12 0.50 Dshi_1336 peptide chain release factor 3 (RefSeq) 0.15 Dshi_1760 glutamate racemase (RefSeq) — —
Pedobacter sp. GW460-11-11-14-LB5 0.49 CA265_RS18435 peptide chain release factor 3 0.23 CA265_RS15060 glutamate racemase — —
Bacteroides ovatus ATCC 8483 0.48 BACOVA_04458 peptide chain release factor 3 0.23 BACOVA_03540 glutamate racemase — —
Phocaeicola dorei CL03T12C01 0.48 ABI39_RS00385 peptide chain release factor 3 0.25 ABI39_RS07035 glutamate racemase — —
Phocaeicola vulgatus CL09T03C04 0.48 HMPREF1058_RS07935 peptide chain release factor 3 0.26 HMPREF1058_RS09645 glutamate racemase — —
Bacteroides thetaiotaomicron VPI-5482 0.48 BT1729 peptide chain release factor 3 (RF-3) (NCBI ptt file) 0.23 BT3722 glutamate racemase (NCBI ptt file) — —
Bacteroides stercoris CC31F 0.47 HMPREF1181_RS05585 peptide chain release factor 3 0.24 HMPREF1181_RS03335 glutamate racemase — —
Caulobacter crescentus NA1000 0.47 CCNA_01123 peptide chain release factor RF-3 0.15 CCNA_03817 glutamate racemase low > 66
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_01123 peptide chain release factor RF-3 0.15 CCNA_03817 glutamate racemase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS15275 peptide chain release factor 3 0.15 A4249_RS12530 aspartate/glutamate racemase family protein — —
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_2365 prfC peptide chain release factor 3 0.29 Synpcc7942_2361 murI glutamate racemase — —

Not shown: 43 genomes with orthologs for RR42_RS37475 only; 4 genomes with orthologs for RR42_RS13910 only