Conservation of cofitness between RR42_RS17675 and RR42_RS02765 in Cupriavidus basilensis FW507-4G11

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS17675 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 1.0 RR42_RS02765 aminoglycoside phosphotransferase 0.63 2
Ralstonia solanacearum PSI07 0.79 RPSI07_RS11275 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.52 RPSI07_RS21480 aminoglycoside phosphotransferase 0.58 12
Ralstonia solanacearum GMI1000 0.79 RS_RS13915 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.52 RS_RS02560 aminoglycoside phosphotransferase 0.52 29
Ralstonia solanacearum IBSBF1503 0.78 RALBFv3_RS05970 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.52 RALBFv3_RS11735 aminoglycoside phosphotransferase 0.76 2
Ralstonia solanacearum UW163 0.78 UW163_RS07655 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.52 UW163_RS01850 aminoglycoside phosphotransferase — —
Ralstonia sp. UNC404CL21Col 0.78 ABZR87_RS01630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.52 ABZR87_RS07690 aminoglycoside phosphotransferase family protein 0.42 10
Paraburkholderia sabiae LMG 24235 0.73 QEN71_RS27145 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.46 QEN71_RS02110 phosphotransferase low > 153
Paraburkholderia graminis OAS925 0.72 ABIE53_003563 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.47 ABIE53_000796 aminoglycoside/choline kinase family phosphotransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.72 H281DRAFT_06288 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.47 H281DRAFT_04636 hypothetical protein 0.36 38
Burkholderia phytofirmans PsJN 0.72 BPHYT_RS16990 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.47 BPHYT_RS03285 aminoglycoside phosphotransferase low > 109
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS01965 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.60 HSERO_RS03520 aminoglycoside phosphotransferase low > 78
Methylophilus sp. DMC18 0.69 GFF2071 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-m eso-2,6-diaminoheptandioate ligase 0.59 GFF264 N-acetylmuramate/N-acetylglucosamine kinase — —
Dechlorosoma suillum PS 0.67 Dsui_0384 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.59 Dsui_1588 aminoglycoside phosphotransferase 0.50 12
Variovorax sp. SCN45 0.61 GFF4445 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) 0.49 GFF3254 Phosphotransferase involved in threonylcarbamoyladenosine t(6)A37 formation in tRNA low > 127
Castellaniella sp019104865 MT123 0.60 ABCV34_RS10690 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.45 ABCV34_RS09505 phosphotransferase low > 48
Pseudomonas simiae WCS417 0.59 PS417_24800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.41 PS417_25790 aminoglycoside phosphotransferase low > 88
Pseudomonas fluorescens SBW25 0.59 PFLU_RS26735 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.42 PFLU_RS27445 phosphotransferase 0.89 5
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS26735 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.42 PFLU_RS27445 phosphotransferase low > 109
Pseudomonas lactucae CFBP13502 0.59 GEMAOFIL_05114 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.42 GEMAOFIL_05278 N-acetylmuramate/N-acetylglucosamine kinase low > 93
Pseudomonas sp. RS175 0.59 PFR28_03883 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.43 PFR28_04060 N-acetylmuramate/N-acetylglucosamine kinase low > 88
Pseudomonas aeruginosa PA14 0.59 IKLFDK_20730 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.43 IKLFDK_22430 N-acetylmuramate/N-acetylglucosamine kinase low > 100
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF583 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.45 GFF2463 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases — —
Pseudomonas putida KT2440 0.58 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.43 PP_0405 conserved protein of unknown function low > 96
Shewanella loihica PV-4 0.58 Shew_3144 UDP-N-acetylmuramate (RefSeq) 0.32 Shew_0883 aminoglycoside phosphotransferase (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_4982 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.43 Pf6N2E2_4809 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases low > 103
Shewanella oneidensis MR-1 0.58 SO3805 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) 0.34 SO3635 hypothetical phosphotransferase (NCBI ptt file) low > 76
Pseudomonas sp. S08-1 0.58 OH686_09400 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.43 OH686_15060 Phosphotransferase low > 80
Pseudomonas sp. BP01 0.58 JOY50_RS23075 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.44 JOY50_RS18160 aminoglycoside phosphotransferase family protein low > 84
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_06550 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.44 AO353_07295 aminoglycoside phosphotransferase low > 101
Pseudomonas sp. DMC3 0.58 GFF3860 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-m eso-2,6-diaminoheptandioate ligase 0.44 GFF33 N-acetylmuramate/N-acetylglucosamine kinase low > 89
Shewanella sp. ANA-3 0.58 Shewana3_0791 UDP-N-acetylmuramate (RefSeq) 0.33 Shewana3_3205 aminoglycoside phosphotransferase (RefSeq) low > 73
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_1344 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.44 PfGW456L13_1204 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases low > 87
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_15235 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.44 AO356_14355 aminoglycoside phosphotransferase low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_0630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.45 Psyr_4623 Aminoglycoside phosphotransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_0630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.45 Psyr_4623 Aminoglycoside phosphotransferase low > 86
Pseudomonas sp. SVBP6 0.58 COO64_RS15685 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.43 COO64_RS22490 aminoglycoside phosphotransferase family protein low > 93
Pseudomonas stutzeri RCH2 0.58 Psest_0673 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.45 Psest_3664 Predicted phosphotransferase related to Ser/Thr protein kinases low > 67
Shewanella amazonensis SB2B 0.57 Sama_0769 UDP-N-acetylmuramate (RefSeq) 0.36 Sama_2815 phosphotransferase (RefSeq) low > 62
Acidovorax sp. GW101-3H11 0.54 Ac3H11_4032 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.46 Ac3H11_4324 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases low > 79
Marinobacter adhaerens HP15 0.52 HP15_616 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.38 HP15_3282 aminoglycoside phosphotransferase low > 73
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_2035 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.35 B158DRAFT_0792 Predicted phosphotransferase related to Ser/Thr protein kinases low > 40
Acinetobacter baumannii LAC-4 0.50 RR41_RS18930 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.31 RR41_RS12015 phosphotransferase low > 55
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS17365 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.36 ABZR86_RS09500 phosphotransferase low > 74
Rhodanobacter sp000427505 FW510-R12 0.49 LRK53_RS01800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.34 LRK53_RS06865 phosphotransferase low > 59
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_17020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-m eso-2,6-diaminoheptandioate ligase 0.38 OKGIIK_09975 Aminoglycoside phosphotransferase low > 52
Acinetobacter radioresistens SK82 0.48 MPMX26_03053 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.33 MPMX26_01212 N-acetylmuramate/N-acetylglucosamine kinase low > 36
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS06610 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.35 LRK54_RS03105 phosphotransferase low > 59
Rhodanobacter denitrificans MT42 0.48 LRK55_RS06355 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.35 LRK55_RS02855 phosphotransferase low > 63
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.1107.1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) 0.33 Xcc-8004.1681.1 hypothetical protein low > 74

Not shown: 36 genomes with orthologs for RR42_RS17675 only; 10 genomes with orthologs for RR42_RS02765 only