Conservation of cofitness between QEN71_RS26560 and QEN71_RS28040 in Paraburkholderia sabiae LMG 24235

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS26560 3-deoxy-7-phosphoheptulonate synthase AroG 1.0 QEN71_RS28040 shikimate kinase 0.59 18
Burkholderia phytofirmans PsJN 0.96 BPHYT_RS03535 phospho-2-dehydro-3-deoxyheptonate aldolase 0.92 BPHYT_RS17890 shikimate kinase 0.81 20
Paraburkholderia graminis OAS925 0.96 ABIE53_000850 3-deoxy-7-phosphoheptulonate synthase 0.91 ABIE53_003741 shikimate kinase — —
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_04687 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.91 H281DRAFT_05614 shikimate kinase — —
Ralstonia sp. UNC404CL21Col 0.86 ABZR87_RS01110 3-deoxy-7-phosphoheptulonate synthase AroG 0.73 ABZR87_RS02595 shikimate kinase 0.78 26
Ralstonia solanacearum GMI1000 0.86 RS_RS13320 3-deoxy-7-phosphoheptulonate synthase 0.70 RS_RS14885 shikimate kinase low > 80
Cupriavidus basilensis FW507-4G11 0.85 RR42_RS05860 phospho-2-dehydro-3-deoxyheptonate aldolase 0.74 RR42_RS19010 shikimate kinase 0.76 28
Ralstonia solanacearum PSI07 0.85 RPSI07_RS11845 3-deoxy-7-phosphoheptulonate synthase 0.69 RPSI07_RS10295 shikimate kinase — —
Ralstonia solanacearum UW163 0.85 UW163_RS08165 3-deoxy-7-phosphoheptulonate synthase 0.69 UW163_RS06675 shikimate kinase — —
Ralstonia solanacearum IBSBF1503 0.85 RALBFv3_RS05460 3-deoxy-7-phosphoheptulonate synthase 0.69 RALBFv3_RS06940 shikimate kinase 0.79 2
Dechlorosoma suillum PS 0.73 Dsui_3444 phospho-2-dehydro-3-deoxyheptonate aldolase 0.55 Dsui_1094 shikimate kinase low > 51
Castellaniella sp019104865 MT123 0.71 ABCV34_RS06825 3-deoxy-7-phosphoheptulonate synthase AroG 0.42 ABCV34_RS12700 shikimate kinase — —
Serratia liquefaciens MT49 0.67 IAI46_06405 3-deoxy-7-phosphoheptulonate synthase AroG 0.44 IAI46_23705 shikimate kinase AroK — —
Dickeya dianthicola ME23 0.67 DZA65_RS06960 3-deoxy-7-phosphoheptulonate synthase AroG 0.39 DZA65_RS20765 shikimate kinase AroK — —
Dickeya dianthicola 67-19 0.67 HGI48_RS06605 3-deoxy-7-phosphoheptulonate synthase AroG 0.39 HGI48_RS19680 shikimate kinase AroK — —
Dickeya dadantii 3937 0.67 DDA3937_RS06560 3-deoxy-7-phosphoheptulonate synthase AroG 0.39 DDA3937_RS19550 shikimate kinase AroK — —
Shewanella loihica PV-4 0.67 Shew_0851 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.46 Shew_0213 shikimate kinase I (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.67 ABZR86_RS00390 3-deoxy-7-phosphoheptulonate synthase 0.36 ABZR86_RS10475 shikimate kinase 0.55 62
Shewanella sp. ANA-3 0.67 Shewana3_3528 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.46 Shewana3_3894 aroK shikimate kinase I (RefSeq) — —
Pectobacterium carotovorum WPP14 0.66 HER17_RS14805 3-deoxy-7-phosphoheptulonate synthase AroG 0.45 HER17_RS01775 shikimate kinase AroK — —
Escherichia coli ECOR38 0.66 HEPCGN_01535 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.44 HEPCGN_15930 aroK shikimate kinase AroK low > 87
Shewanella oneidensis MR-1 0.66 SO0756 aroG phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive (NCBI ptt file) 0.46 SO0286 aroK shikimate kinase (NCBI ptt file) — —
Escherichia coli ECOR27 0.66 NOLOHH_23170 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.44 NOLOHH_08900 aroK shikimate kinase AroK low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_02959 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.44 OHPLBJKB_00313 Shikimate kinase 1 — —
Escherichia fergusonii Becca 0.66 EFB2_03352 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.44 EFB2_00438 Shikimate kinase 1 low > 86
Escherichia coli BW25113 0.66 b0754 aroG 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI) 0.44 b3390 aroK shikimate kinase I (NCBI) 0.19 58
Escherichia coli BL21 0.66 ECD_00707 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible 0.44 ECD_03242 shikimate kinase I low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF8 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.42 GFF629 Shikimate kinase I (EC 2.7.1.71) — —
Escherichia coli Nissle 1917 0.66 ECOLIN_RS04015 3-deoxy-7-phosphoheptulonate synthase AroG 0.44 ECOLIN_RS19365 shikimate kinase AroK — —
Pantoea sp. MT58 0.66 IAI47_13605 3-deoxy-7-phosphoheptulonate synthase AroG 0.44 IAI47_01890 shikimate kinase AroK — —
Rahnella sp. WP5 0.66 EX31_RS23545 3-deoxy-7-phosphoheptulonate synthase AroG 0.45 EX31_RS04725 shikimate kinase AroK low > 89
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.704.1 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) 0.32 Xcc-8004.1616.1 Shikimate kinase I (EC 2.7.1.71) low > 74
Escherichia coli ECRC62 0.65 BNILDI_21165 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.44 BNILDI_02620 aroK shikimate kinase AroK — —
Enterobacter sp. TBS_079 0.65 MPMX20_01381 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.45 MPMX20_04279 Shikimate kinase 1 low > 85
Klebsiella michiganensis M5al 0.65 BWI76_RS08600 3-deoxy-7-phosphoheptulonate synthase 0.44 BWI76_RS26090 shikimate kinase — —
Variovorax sp. SCN45 0.65 GFF4447 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) 0.46 GFF5324 Shikimate kinase I (EC 2.7.1.71) low > 127
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_19270 3-deoxy-7-phosphoheptulonate synthase 0.45 CSW01_13305 shikimate kinase low > 62
Variovorax sp. OAS795 0.65 ABID97_RS06345 3-deoxy-7-phosphoheptulonate synthase 0.50 ABID97_RS23260 shikimate kinase — —
Enterobacter asburiae PDN3 0.65 EX28DRAFT_2241 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.45 EX28DRAFT_4152 shikimate kinase (EC 2.7.1.71) low > 76
Erwinia tracheiphila SCR3 0.64 LU632_RS15925 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.45 LU632_RS22870 aroK shikimate kinase AroK — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF581 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.54 GFF1332 Shikimate kinase I (EC 2.7.1.71) 0.69 16
Acidovorax sp. GW101-3H11 0.63 Ac3H11_4034 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.50 Ac3H11_3449 Shikimate kinase I (EC 2.7.1.71) 0.96 3
Shewanella amazonensis SB2B 0.61 Sama_0657 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.47 Sama_3368 aroK shikimate kinase I (RefSeq) — —
Acinetobacter radioresistens SK82 0.49 MPMX26_01673 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.47 MPMX26_02811 Shikimate kinase 1 — —
Pseudomonas stutzeri RCH2 0.48 Psest_2331 phospho-2-dehydro-3-deoxyheptonate aldolase 0.48 Psest_3714 Shikimate kinase — —
Pseudomonas sp. S08-1 0.48 OH686_01760 3-deoxy-7-phosphoheptulonate synthase 0.45 OH686_10020 Shikimate kinase I low > 80
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_1384 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.43 B158DRAFT_0763 shikimate kinase (EC 2.7.1.71) — —
Pseudomonas putida KT2440 0.47 PP_2324 tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase 0.44 PP_5079 Shikimate kinase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.46 Psyr_0408 shikimate kinase — —
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.46 Psyr_0408 shikimate kinase — —
Pseudomonas simiae WCS417 0.46 PS417_08430 phospho-2-dehydro-3-deoxyheptonate aldolase 0.46 PS417_01980 shikimate kinase — —
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.46 PFLU_RS02025 shikimate kinase AroK — —
Pseudomonas fluorescens SBW25 0.46 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.46 PFLU_RS02025 shikimate kinase AroK — —
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_19030 phospho-2-dehydro-3-deoxyheptonate aldolase 0.45 AO353_12500 shikimate kinase low > 101
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_03200 phospho-2-dehydro-3-deoxyheptonate aldolase 0.45 AO356_09390 shikimate kinase — —
Marinobacter adhaerens HP15 0.46 HP15_1814 phospho-2-dehydro-3-heoxyheptonate aldolase 0.40 HP15_479 shikimate kinase I — —

Not shown: 18 genomes with orthologs for QEN71_RS26560 only; 5 genomes with orthologs for QEN71_RS28040 only