Conservation of cofitness between QEN71_RS23895 and QEN71_RS06115 in Paraburkholderia sabiae LMG 24235

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS23895 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 1.0 QEN71_RS06115 peptidylprolyl isomerase 0.49 15
Paraburkholderia graminis OAS925 0.90 ABIE53_001640 23S rRNA (adenine2030-N6)-methyltransferase 0.93 ABIE53_002710 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) low > 113
Burkholderia phytofirmans PsJN 0.90 BPHYT_RS06880 competence protein ComJ 0.93 BPHYT_RS12445 cyclophilin — —
Ralstonia solanacearum GMI1000 0.67 RS_RS16875 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.81 RS_RS05800 cyclophilin — —
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS09065 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.80 RALBFv3_RS14985 cyclophilin low > 76
Ralstonia solanacearum UW163 0.67 UW163_RS04530 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.80 UW163_RS12455 cyclophilin — —
Ralstonia solanacearum PSI07 0.66 RPSI07_RS08205 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.81 RPSI07_RS18390 cyclophilin — —
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS04360 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.81 ABZR87_RS10630 peptidylprolyl isomerase low > 80
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS09005 competence protein ComJ 0.78 RR42_RS06335 cyclophilin low > 128
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS10595 competence protein ComJ 0.68 HSERO_RS09310 cyclophilin — —
Castellaniella sp019104865 MT123 0.49 ABCV34_RS03075 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.75 ABCV34_RS00375 peptidylprolyl isomerase low > 48
Escherichia fergusonii Becca 0.44 EFB2_00316 Ribosomal RNA large subunit methyltransferase J 0.68 EFB2_03536 Peptidyl-prolyl cis-trans isomerase B — —
Escherichia coli Nissle 1917 0.44 ECOLIN_RS19990 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.68 ECOLIN_RS03045 peptidylprolyl isomerase B — —
Escherichia coli ECRC102 0.44 NIAGMN_14175 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.68 NIAGMN_05880 ppiB peptidylprolyl isomerase B — —
Enterobacter sp. TBS_079 0.44 MPMX20_04398 Ribosomal RNA large subunit methyltransferase J 0.67 MPMX20_01101 Peptidyl-prolyl cis-trans isomerase B low > 85
Escherichia coli ECRC101 0.44 MCAODC_06925 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.68 MCAODC_27045 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECRC100 0.44 OKFHMN_16410 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.68 OKFHMN_07825 ppiB peptidylprolyl isomerase B — —
Escherichia coli BL21 0.44 ECD_03348 23S rRNA m(6)A2030 methyltransferase, SAM-dependent 0.68 ECD_00475 peptidyl-prolyl cis-trans isomerase B (rotamase B) — —
Escherichia coli ECRC62 0.44 BNILDI_03215 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.68 BNILDI_22245 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECRC99 0.44 KEDOAH_11735 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.68 KEDOAH_20145 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECOR27 0.44 NOLOHH_08345 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.68 NOLOHH_00815 ppiB peptidylprolyl isomerase B — —
Escherichia coli ECOR38 0.43 HEPCGN_15320 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.68 HEPCGN_06465 ppiB peptidylprolyl isomerase B — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF1683 Protein involved in catabolism of external DNA 0.72 GFF5146 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.64 73
Enterobacter asburiae PDN3 0.43 EX28DRAFT_4062 Protein involved in catabolism of external DNA 0.67 EX28DRAFT_2455 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family — —
Klebsiella michiganensis M5al 0.43 BWI76_RS26680 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.69 BWI76_RS07085 peptidyl-prolyl cis-trans isomerase — —
Escherichia coli ECRC98 0.43 JDDGAC_20040 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.68 JDDGAC_11475 ppiB peptidylprolyl isomerase B — —
Variovorax sp. SCN45 0.43 GFF2057 23S rRNA (adenine(2030)-N(6))-methyltransferase (EC 2.1.1.266) 0.75 GFF553 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) low > 127
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF515 Protein involved in catabolism of external DNA 0.68 GFF4441 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_00204 Ribosomal RNA large subunit methyltransferase J 0.68 OHPLBJKB_03156 Peptidyl-prolyl cis-trans isomerase B — —
Escherichia coli BW25113 0.43 b3499 yhiR predicted DNA (exogenous) processing protein (NCBI) 0.68 b0525 ppiB peptidyl-prolyl cis-trans isomerase B (rotamase B) (NCBI) — —
Pectobacterium carotovorum WPP14 0.43 HER17_RS21245 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.68 HER17_RS06485 peptidylprolyl isomerase B — —
Serratia liquefaciens MT49 0.42 IAI46_24235 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.69 IAI46_05385 peptidylprolyl isomerase B low > 86
Rahnella sp. WP5 0.42 EX31_RS05170 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.73 EX31_RS22640 peptidylprolyl isomerase B — —
Pantoea sp. MT58 0.42 IAI47_01340 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.68 IAI47_14340 peptidylprolyl isomerase B — —
Dickeya dianthicola 67-19 0.42 HGI48_RS00055 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.68 HGI48_RS15175 peptidylprolyl isomerase B low > 71
Variovorax sp. OAS795 0.42 ABID97_RS25005 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.75 ABID97_RS17860 peptidylprolyl isomerase low > 91
Dickeya dianthicola ME23 0.41 DZA65_RS00045 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.68 DZA65_RS15980 peptidylprolyl isomerase B — —
Dickeya dadantii 3937 0.41 DDA3937_RS21255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.69 DDA3937_RS15095 peptidylprolyl isomerase B — —
Acidovorax sp. GW101-3H11 0.40 Ac3H11_3047 Protein involved in catabolism of external DNA 0.65 Ac3H11_41 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) low > 79
Erwinia tracheiphila SCR3 0.40 LU632_RS19485 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.66 LU632_RS15235 ppiB peptidylprolyl isomerase B — —
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_01005 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.63 CSW01_09260 peptidylprolyl isomerase low > 62
Shewanella loihica PV-4 0.39 Shew_3648 hypothetical protein (RefSeq) 0.70 Shew_2512 peptidylprolyl isomerase (RefSeq) — —
Shewanella amazonensis SB2B 0.39 Sama_3563 hypothetical protein (RefSeq) 0.65 Sama_1220 peptidyl-prolyl cis-trans isomerase B (RefSeq) — —
Shewanella sp. ANA-3 0.39 Shewana3_4038 hypothetical protein (RefSeq) 0.67 Shewana3_2665 peptidyl-prolyl cis-trans isomerase, cyclophilin type (RefSeq) — —
Shewanella oneidensis MR-1 0.39 SO4659 conserved hypothetical protein (NCBI ptt file) 0.68 SO1790 ppiB-1 peptidyl-prolyl cis-trans isomerase B (NCBI ptt file) low > 76
Pseudomonas sp. S08-1 0.38 OH686_09780 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.72 OH686_03750 Peptidyl-prolyl cis-trans isomerase PpiB low > 80
Pseudomonas putida KT2440 0.37 PP_4945 23S rRNA m(6)A2030 methyltransferase 0.72 PP_2903 peptidyl-prolyl cis-trans isomerase B (rotamase B) low > 96
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_3679 Protein involved in catabolism of external DNA 0.69 Pf6N2E2_151 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) — —
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_4772 Protein of unknown function DUF519 0.68 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_4772 Protein of unknown function DUF519 0.68 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type low > 86
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_08990 lactate dehydrogenase 0.67 AO356_01015 peptidylprolyl isomerase low > 104
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_12840 lactate dehydrogenase 0.68 AO353_27825 peptidylprolyl isomerase low > 101
Pseudomonas simiae WCS417 0.35 PS417_02200 lactate dehydrogenase 0.66 PS417_16900 peptidylprolyl isomerase — —
Pseudomonas fluorescens SBW25 0.35 PFLU_RS02255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.66 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS02255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.66 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase low > 109
Pseudomonas stutzeri RCH2 0.35 Psest_0408 Protein involved in catabolism of external DNA 0.71 Psest_2304 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family low > 67
Pseudomonas sp. RS175 0.35 PFR28_05056 Ribosomal RNA large subunit methyltransferase J 0.69 PFR28_02745 Peptidyl-prolyl cis-trans isomerase cyp18 low > 88
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1481 Protein involved in catabolism of external DNA 0.69 Pf1N1B4_4004 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) low > 87
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_219 Protein involved in catabolism of external DNA 0.66 PfGW456L13_2608 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) low > 87
Alteromonas macleodii MIT1002 0.34 MIT1002_02015 Ribosomal RNA large subunit methyltransferase J 0.68 MIT1002_02501 Peptidyl-prolyl cis-trans isomerase B low > 70
Acinetobacter radioresistens SK82 0.31 MPMX26_02660 Ribosomal RNA large subunit methyltransferase J 0.67 MPMX26_01727 Peptidyl-prolyl cis-trans isomerase cyp18 low > 36
Rhodopseudomonas palustris CGA009 0.28 TX73_006025 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.25 TX73_013475 peptidylprolyl isomerase low > 86
Bosea sp. OAE506 0.26 ABIE41_RS11490 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.26 ABIE41_RS17835 peptidylprolyl isomerase — —
Marinobacter adhaerens HP15 0.25 HP15_2563 protein containing DUF519 0.65 HP15_2190 peptidyl-prolyl cis-trans isomerase B low > 73

Not shown: 19 genomes with orthologs for QEN71_RS23895 only; 8 genomes with orthologs for QEN71_RS06115 only