Conservation of cofitness between QEN71_RS26560 and QEN71_RS04085 in Paraburkholderia sabiae LMG 24235

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS26560 3-deoxy-7-phosphoheptulonate synthase AroG 1.0 QEN71_RS04085 3-phosphoshikimate 1-carboxyvinyltransferase 0.63 16
Burkholderia phytofirmans PsJN 0.96 BPHYT_RS03535 phospho-2-dehydro-3-deoxyheptonate aldolase 0.90 BPHYT_RS14895 3-phosphoshikimate 1-carboxyvinyltransferase 0.83 12
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_04687 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.91 H281DRAFT_03922 3-phosphoshikimate 1-carboxyvinyltransferase — —
Paraburkholderia graminis OAS925 0.96 ABIE53_000850 3-deoxy-7-phosphoheptulonate synthase 0.88 ABIE53_003154 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia sp. UNC404CL21Col 0.86 ABZR87_RS01110 3-deoxy-7-phosphoheptulonate synthase AroG 0.71 ABZR87_RS09465 3-phosphoshikimate 1-carboxyvinyltransferase 0.77 27
Ralstonia solanacearum GMI1000 0.86 RS_RS13320 3-deoxy-7-phosphoheptulonate synthase 0.70 RS_RS04510 3-phosphoshikimate 1-carboxyvinyltransferase 0.71 5
Cupriavidus basilensis FW507-4G11 0.85 RR42_RS05860 phospho-2-dehydro-3-deoxyheptonate aldolase 0.68 RR42_RS04475 3-phosphoshikimate 1-carboxyvinyltransferase 0.90 3
Ralstonia solanacearum PSI07 0.85 RPSI07_RS11845 3-deoxy-7-phosphoheptulonate synthase 0.69 RPSI07_RS19695 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum IBSBF1503 0.85 RALBFv3_RS05460 3-deoxy-7-phosphoheptulonate synthase 0.69 RALBFv3_RS13775 3-phosphoshikimate 1-carboxyvinyltransferase 0.46 62
Ralstonia solanacearum UW163 0.85 UW163_RS08165 3-deoxy-7-phosphoheptulonate synthase 0.69 UW163_RS16035 3-phosphoshikimate 1-carboxyvinyltransferase — —
Herbaspirillum seropedicae SmR1 0.82 HSERO_RS07160 phospho-2-dehydro-3-deoxyheptonate aldolase 0.63 HSERO_RS18420 3-phosphoshikimate 1-carboxyvinyltransferase — —
Serratia liquefaciens MT49 0.67 IAI46_06405 3-deoxy-7-phosphoheptulonate synthase AroG 0.54 IAI46_08640 3-phosphoshikimate 1-carboxyvinyltransferase low > 86
Dickeya dianthicola 67-19 0.67 HGI48_RS06605 3-deoxy-7-phosphoheptulonate synthase AroG 0.52 HGI48_RS09685 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter sp. FW510-T8 0.67 OKGIIK_09785 3-deoxy-7-phosphoheptulonate synthase 0.18 OKGIIK_06920 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dianthicola ME23 0.67 DZA65_RS06960 3-deoxy-7-phosphoheptulonate synthase AroG 0.52 DZA65_RS09995 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dadantii 3937 0.67 DDA3937_RS06560 3-deoxy-7-phosphoheptulonate synthase AroG 0.52 DDA3937_RS09675 3-phosphoshikimate 1-carboxyvinyltransferase — —
Shewanella loihica PV-4 0.67 Shew_0851 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.55 Shew_1952 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.67 Shewana3_3528 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.55 Shewana3_1975 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) low > 73
Rhodanobacter denitrificans FW104-10B01 0.67 LRK54_RS02730 3-deoxy-7-phosphoheptulonate synthase 0.16 LRK54_RS00390 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter denitrificans MT42 0.67 LRK55_RS02485 3-deoxy-7-phosphoheptulonate synthase 0.18 LRK55_RS00130 3-phosphoshikimate 1-carboxyvinyltransferase low > 63
Dyella japonica UNC79MFTsu3.2 0.67 ABZR86_RS00390 3-deoxy-7-phosphoheptulonate synthase 0.19 ABZR86_RS02230 3-phosphoshikimate 1-carboxyvinyltransferase 0.55 63
Pectobacterium carotovorum WPP14 0.66 HER17_RS14805 3-deoxy-7-phosphoheptulonate synthase AroG 0.51 HER17_RS12285 3-phosphoshikimate 1-carboxyvinyltransferase low > 75
Escherichia coli ECOR38 0.66 HEPCGN_01535 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.54 HEPCGN_23035 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 87
Shewanella oneidensis MR-1 0.66 SO0756 aroG phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive (NCBI ptt file) 0.55 SO2404 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file) low > 76
Escherichia coli ECRC99 0.66 KEDOAH_21225 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.54 KEDOAH_22250 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli BW25113 0.66 b0754 aroG 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI) 0.54 b0908 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) 0.18 73
Escherichia coli ECRC98 0.66 JDDGAC_10395 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.54 JDDGAC_09095 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.62 51
Escherichia coli ECRC101 0.66 MCAODC_25960 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.54 MCAODC_24875 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_02959 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.54 OHPLBJKB_02760 3-phosphoshikimate 1-carboxyvinyltransferase low > 73
Escherichia fergusonii Becca 0.66 EFB2_03352 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.54 EFB2_03156 3-phosphoshikimate 1-carboxyvinyltransferase low > 86
Escherichia coli BL21 0.66 ECD_00707 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible 0.54 ECD_00912 5-enolpyruvylshikimate-3-phosphate synthetase low > 61
Escherichia coli ECOR27 0.66 NOLOHH_23170 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.54 NOLOHH_22045 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 75
Escherichia coli ECRC100 0.66 OKFHMN_06740 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.54 OKFHMN_05485 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF8 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.54 GFF3665 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) — —
Escherichia coli ECRC102 0.66 NIAGMN_04790 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.54 NIAGMN_03205 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pantoea sp. MT58 0.66 IAI47_13605 3-deoxy-7-phosphoheptulonate synthase AroG 0.53 IAI47_12860 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli Nissle 1917 0.66 ECOLIN_RS04015 3-deoxy-7-phosphoheptulonate synthase AroG 0.54 ECOLIN_RS04810 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rahnella sp. WP5 0.66 EX31_RS23545 3-deoxy-7-phosphoheptulonate synthase AroG 0.54 EX31_RS18250 3-phosphoshikimate 1-carboxyvinyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.704.1 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) 0.15 Xcc-8004.3281.1 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) low > 74
Caulobacter crescentus NA1000 Δfur 0.65 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase 0.15 CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase low > 67
Escherichia coli ECRC62 0.65 BNILDI_21165 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.54 BNILDI_20300 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 75
Caulobacter crescentus NA1000 0.65 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase 0.15 CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase — —
Enterobacter sp. TBS_079 0.65 MPMX20_01381 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.55 MPMX20_01567 3-phosphoshikimate 1-carboxyvinyltransferase low > 85
Klebsiella michiganensis M5al 0.65 BWI76_RS08600 3-deoxy-7-phosphoheptulonate synthase 0.54 BWI76_RS09760 3-phosphoshikimate 1-carboxyvinyltransferase low > 92
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_19270 3-deoxy-7-phosphoheptulonate synthase 0.56 CSW01_08705 3-phosphoshikimate 1-carboxyvinyltransferase low > 62
Enterobacter asburiae PDN3 0.65 EX28DRAFT_2241 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.55 EX28DRAFT_2027 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) low > 76
Erwinia tracheiphila SCR3 0.64 LU632_RS15925 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.50 LU632_RS09795 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 74
Rhodopseudomonas palustris CGA009 0.63 TX73_000140 3-deoxy-7-phosphoheptulonate synthase 0.13 TX73_000320 3-phosphoshikimate 1-carboxyvinyltransferase — —
Shewanella amazonensis SB2B 0.61 Sama_0657 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.56 Sama_1734 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) low > 62
Synechococcus elongatus PCC 7942 0.50 Synpcc7942_2501 aroF phospho-2-dehydro-3-heoxyheptonate aldolase 0.16 Synpcc7942_0232 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Bifidobacterium breve UCC2003 0.48 BBR_RS19195 3-deoxy-7-phosphoheptulonate synthase 0.17 BBR_RS14370 3-phosphoshikimate 1-carboxyvinyltransferase low > 34
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_1384 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.20 B158DRAFT_2432 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) low > 40
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.26 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.26 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.22 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase low > 109
Pseudomonas simiae WCS417 0.46 PS417_08430 phospho-2-dehydro-3-deoxyheptonate aldolase 0.22 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase 0.47 5
Pseudomonas fluorescens SBW25 0.46 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.22 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase low > 109

Not shown: 17 genomes with orthologs for QEN71_RS26560 only; 30 genomes with orthologs for QEN71_RS04085 only