Conservation of cofitness between QEN71_RS01450 and QEN71_RS01300 in Paraburkholderia sabiae LMG 24235

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS01450 rhodanese-like domain-containing protein 1.0 QEN71_RS01300 D-alanyl-D-alanine carboxypeptidase family protein 0.77 4
Burkholderia phytofirmans PsJN 0.90 BPHYT_RS02595 sulfurtransferase 0.87 BPHYT_RS02415 cytochrome C550 low > 109
Paraburkholderia graminis OAS925 0.88 ABIE53_000664 rhodanese-related sulfurtransferase 0.88 ABIE53_000626 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) 0.49 18
Paraburkholderia bryophila 376MFSha3.1 0.88 H281DRAFT_02003 Rhodanese-related sulfurtransferase 0.86 H281DRAFT_02054 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 0.39 38
Ralstonia solanacearum PSI07 0.62 RPSI07_RS22405 rhodanese-like domain-containing protein 0.57 RPSI07_RS22545 D-alanyl-D-alanine carboxypeptidase low > 81
Ralstonia solanacearum GMI1000 0.62 RS_RS01745 rhodanese-like domain-containing protein 0.57 RS_RS01610 D-alanyl-D-alanine carboxypeptidase low > 80
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS06755 rhodanese-like domain-containing protein 0.56 ABZR87_RS06610 D-alanyl-D-alanine carboxypeptidase family protein low > 80
Ralstonia solanacearum UW163 0.61 UW163_RS02675 rhodanese-like domain-containing protein 0.56 UW163_RS02810 D-alanyl-D-alanine carboxypeptidase — —
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS10905 rhodanese-like domain-containing protein 0.56 RALBFv3_RS10770 D-alanyl-D-alanine carboxypeptidase low > 76
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS01830 sulfurtransferase 0.58 RR42_RS01680 cytochrome C550 low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF1225 FIG136845: Rhodanese-related sulfurtransferase 0.42 GFF1806 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 90
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3857 FIG136845: Rhodanese-related sulfurtransferase 0.42 Ac3H11_2142 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Castellaniella sp019104865 MT123 0.41 ABCV34_RS14265 rhodanese-like domain-containing protein 0.43 ABCV34_RS13340 D-alanyl-D-alanine carboxypeptidase family protein — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS00815 sulfurtransferase 0.49 HSERO_RS21530 cytochrome C550 0.31 38
Variovorax sp. OAS795 0.38 ABID97_RS07390 rhodanese-like domain-containing protein 0.43 ABID97_RS00695 D-alanyl-D-alanine carboxypeptidase family protein low > 91
Variovorax sp. SCN45 0.38 GFF2570 Rhodanese-related sulfurtransferase YibN 0.43 GFF3627 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 127
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_0709 Rhodanese-related sulfurtransferase 0.39 B158DRAFT_0079 D-alanyl-D-alanine carboxypeptidase — —
Dechlorosoma suillum PS 0.33 Dsui_1273 Rhodanese-related sulfurtransferase 0.48 Dsui_0899 D-alanyl-D-alanine carboxypeptidase low > 51
Alteromonas macleodii MIT1002 0.33 MIT1002_00488 Thiosulfate sulfurtransferase GlpE 0.35 MIT1002_01848 D-alanyl-D-alanine carboxypeptidase DacC precursor — —
Lysobacter sp. OAE881 0.31 ABIE51_RS00485 rhodanese-like domain-containing protein 0.39 ABIE51_RS03165 D-alanyl-D-alanine carboxypeptidase family protein low > 62
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_13415 rhodanese-like domain-containing protein 0.34 CSW01_04845 D-alanyl-D-alanine carboxypeptidase low > 62
Pseudomonas simiae WCS417 0.28 PS417_01610 sulfurtransferase 0.37 PS417_24705 D-alanyl-D-alanine carboxypeptidase — —
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_12120 sulfurtransferase 0.37 AO353_06455 D-alanyl-D-alanine carboxypeptidase — —
Pseudomonas sp. S08-1 0.28 OH686_14660 Rhodanese-related sulfurtransferase YibN 0.36 OH686_09300 D-alanyl-D-alanine carboxypeptidase low > 80
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS16930 rhodanese-like domain-containing protein 0.41 ABZR86_RS17490 D-alanyl-D-alanine carboxypeptidase family protein — —
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS01660 rhodanese-like domain-containing protein 0.37 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase 0.28 11
Pseudomonas fluorescens SBW25 0.28 PFLU_RS01660 rhodanese-like domain-containing protein 0.37 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase low > 109
Pseudomonas sp. RS175 0.28 PFR28_04939 putative protein YibN 0.37 PFR28_03864 D-alanyl-D-alanine carboxypeptidase DacC 0.35 14
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3831 FIG136845: Rhodanese-related sulfurtransferase 0.36 Pf6N2E2_5001 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Shewanella sp. ANA-3 0.27 Shewana3_0052 rhodanese domain-containing protein (RefSeq) 0.35 Shewana3_0991 penicillin-binding protein 6 (RefSeq) low > 73
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_1616 FIG136845: Rhodanese-related sulfurtransferase 0.36 Pf1N1B4_2696 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_09765 sulfurtransferase 0.37 AO356_15330 D-alanyl-D-alanine carboxypeptidase low > 104
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_352 FIG136845: Rhodanese-related sulfurtransferase 0.36 PfGW456L13_1364 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Marinobacter adhaerens HP15 0.27 HP15_3004 rhodanese domain protein 0.39 HP15_608 serine-type D-Ala-D-Ala carboxypeptidase — —
Serratia liquefaciens MT49 0.26 IAI46_24705 rhodanese-like domain-containing protein 0.33 IAI46_13850 serine-type D-Ala-D-Ala carboxypeptidase DacD low > 86
Pectobacterium carotovorum WPP14 0.26 HER17_RS20745 rhodanese-like domain-containing protein 0.34 HER17_RS12545 serine hydrolase low > 75
Pantoea sp. MT58 0.26 IAI47_00725 rhodanese-like domain-containing protein 0.34 IAI47_13090 serine hydrolase low > 76
Shewanella oneidensis MR-1 0.26 SO0050 rhodanese domain protein (NCBI ptt file) 0.35 SO1164 dacA-1 D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) — —
Rahnella sp. WP5 0.26 EX31_RS14355 rhodanese-like domain-containing protein 0.34 EX31_RS09695 D-alanyl-D-alanine carboxypeptidase low > 89
Pseudomonas putida KT2440 0.26 PP_5055 Sulfurtransferase 0.36 PP_4803 D-alanyl-D-alanine carboxypeptidase 0.28 16
Enterobacter asburiae PDN3 0.25 EX28DRAFT_3862 Rhodanese-related sulfurtransferase 0.35 EX28DRAFT_2127 D-alanyl-D-alanine carboxypeptidase low > 76
Escherichia coli ECOR27 0.24 NOLOHH_07620 yibN Uncharacterized protein YibN 0.35 NOLOHH_22410 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 75
Escherichia coli Nissle 1917 0.24 ECOLIN_RS20610 rhodanese-like domain-containing protein 0.35 ECOLIN_RS04460 serine-type D-Ala-D-Ala carboxypeptidase — —
Dickeya dianthicola 67-19 0.24 HGI48_RS00785 rhodanese-like domain-containing protein 0.35 HGI48_RS09435 serine hydrolase low > 71
Escherichia coli ECRC102 0.24 NIAGMN_13500 yibN Uncharacterized protein YibN 0.35 NIAGMN_04085 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli BW25113 0.24 b3611 yibN predicted rhodanese-related sulfurtransferase (NCBI) 0.36 b0839 dacC D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) (NCBI) low > 76
Dickeya dianthicola ME23 0.24 DZA65_RS00840 rhodanese-like domain-containing protein 0.34 DZA65_RS09745 D-alanyl-D-alanine carboxypeptidase low > 75
Escherichia fergusonii Becca 0.24 EFB2_00199 putative protein YibN 0.35 EFB2_03267 D-alanyl-D-alanine carboxypeptidase DacC low > 86
Escherichia coli ECRC100 0.24 OKFHMN_15740 yibN Uncharacterized protein YibN 0.35 OKFHMN_06040 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_00088 putative protein YibN 0.36 OHPLBJKB_02871 D-alanyl-D-alanine carboxypeptidase DacC low > 73
Escherichia coli ECOR38 0.24 HEPCGN_14580 yibN Uncharacterized protein YibN 0.35 HEPCGN_01990 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 87
Escherichia coli BL21 0.24 ECD_03469 putative rhodanese-related sulfurtransferase 0.36 ECD_00806 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a low > 61
Escherichia coli ECRC98 0.24 JDDGAC_19365 yibN Uncharacterized protein YibN 0.35 JDDGAC_09675 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 86
Escherichia coli ECRC99 0.24 KEDOAH_12410 yibN Uncharacterized protein YibN 0.35 KEDOAH_21870 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECRC101 0.24 MCAODC_06250 yibN Uncharacterized protein YibN 0.35 MCAODC_25255 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 87
Escherichia coli ECRC62 0.24 BNILDI_03895 yibN Uncharacterized protein YibN 0.35 BNILDI_20670 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 75
Dickeya dadantii 3937 0.24 DDA3937_RS20415 rhodanese-like domain-containing protein 0.34 DDA3937_RS09420 serine hydrolase low > 74
Erwinia tracheiphila SCR3 0.23 LU632_RS21890 rhodanese-like domain-containing protein 0.32 LU632_RS16390 dacA D-alanyl-D-alanine carboxypeptidase DacA low > 74
Pseudomonas stutzeri RCH2 0.23 Psest_0163 Rhodanese-related sulfurtransferase 0.39 Psest_0516 D-alanyl-D-alanine carboxypeptidase — —
Klebsiella michiganensis M5al 0.23 BWI76_RS27225 rhodanese-like domain-containing protein 0.33 BWI76_RS09145 serine-type D-Ala-D-Ala carboxypeptidase low > 92
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_4884 Rhodanese-like protein 0.36 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 low > 86
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_4884 Rhodanese-like protein 0.36 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 low > 86

Not shown: 3 genomes with orthologs for QEN71_RS01450 only; 21 genomes with orthologs for QEN71_RS01300 only