Conservation of cofitness between Psyr_2975 and Psyr_5088 in Pseudomonas syringae pv. syringae B728a

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1.0 Psyr_5088 regulatory protein, LuxR:Response regulator receiver 0.30 20
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1.00 Psyr_5088 regulatory protein, LuxR:Response regulator receiver low > 86
Pseudomonas simiae WCS417 0.98 PS417_14045 alkyl hydroperoxide reductase 0.41 PS417_10320 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_22805 alkyl hydroperoxide reductase 0.68 AO356_22615 nodulation protein NolW
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_5011 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.52 Pf1N1B4_4408 two-component response regulator
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_447 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.38 Pf6N2E2_1724 DNA-binding response regulator, LuxR family
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_2927 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.36 PfGW456L13_3749 Nitrogen regulation protein NR(I) low > 87
Pseudomonas sp. RS175 0.95 PFR28_02482 Alkyl hydroperoxide reductase C 0.67 PFR28_02521 Response regulator protein TmoT
Pseudomonas putida KT2440 0.88 PP_2439 peroxiredoxin, alkylhydroperoxide reductase - small subunit 0.38 PP_3551 DNA-binding response regulator, LuxR family low > 96
Azospirillum sp. SherDot2 0.87 MPMX19_05835 Alkyl hydroperoxide reductase C 0.50 MPMX19_03583 Response regulator protein TodT
Azospirillum brasilense Sp245 0.86 AZOBR_RS20510 alkyl hydroperoxide reductase subunit C 0.54 AZOBR_RS17625 Nodulation protein W
Dyella japonica UNC79MFTsu3.2 0.83 ABZR86_RS08490 alkyl hydroperoxide reductase subunit C 0.32 ABZR86_RS13745 response regulator
Herbaspirillum seropedicae SmR1 0.81 HSERO_RS21540 alkyl hydroperoxide reductase subunit C 0.42 HSERO_RS22535 LuxR family transcriptional regulator low > 78
Lysobacter sp. OAE881 0.81 ABIE51_RS05485 alkyl hydroperoxide reductase subunit C 0.55 ABIE51_RS11970 response regulator transcription factor low > 62
Paraburkholderia sabiae LMG 24235 0.79 QEN71_RS13380 alkyl hydroperoxide reductase subunit C 0.53 QEN71_RS39350 response regulator transcription factor
Castellaniella sp019104865 MT123 0.78 ABCV34_RS09920 alkyl hydroperoxide reductase subunit C 0.39 ABCV34_RS04170 response regulator transcription factor
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS26845 alkyl hydroperoxide reductase subunit C 0.50 BPHYT_RS11910 chemotaxis protein CheY
Paraburkholderia graminis OAS925 0.78 ABIE53_005904 peroxiredoxin 0.54 ABIE53_001505 FixJ family two-component response regulator low > 113
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_02890 peroxiredoxin (alkyl hydroperoxide reductase subunit C) 0.51 H281DRAFT_03395 two component transcriptional regulator, LuxR family low > 103
Sphingomonas koreensis DSMZ 15582 0.78 Ga0059261_0155 peroxiredoxin 0.33 Ga0059261_3828 two component transcriptional regulator, LuxR family low > 68
Pantoea sp. MT58 0.77 IAI47_06790 alkyl hydroperoxide reductase subunit C 0.40 IAI47_20275 response regulator transcription factor low > 76
Caulobacter crescentus NA1000 0.76 CCNA_03012 peroxiredoxin 0.34 CCNA_00795 two-component response regulator FixJ low > 66
Caulobacter crescentus NA1000 Δfur 0.76 CCNA_03012 peroxiredoxin 0.34 CCNA_00795 two-component response regulator FixJ
Klebsiella michiganensis M5al 0.75 BWI76_RS07940 alkyl hydroperoxide reductase subunit C 0.28 BWI76_RS14640 DNA-binding response regulator
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF4513 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.28 GFF3576 Tetrathionate reductase two-component response regulator low > 78
Shewanella loihica PV-4 0.75 Shew_0792 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq) 0.42 Shew_3240 two component LuxR family transcriptional regulator (RefSeq) low > 60
Dickeya dadantii 3937 0.74 DDA3937_RS02515 alkyl hydroperoxide reductase subunit C 0.67 DDA3937_RS07235 response regulator transcription factor low > 74
Enterobacter sp. TBS_079 0.74 MPMX20_01271 Alkyl hydroperoxide reductase C 0.25 MPMX20_01965 Response regulator protein TmoT low > 85
Enterobacter asburiae PDN3 0.74 EX28DRAFT_2350 peroxiredoxin 0.38 EX28DRAFT_3507 Response regulator low > 76
Brevundimonas sp. GW460-12-10-14-LB2 0.74 A4249_RS04540 alkyl hydroperoxide reductase subunit C 0.30 A4249_RS15535 response regulator
Shewanella amazonensis SB2B 0.73 Sama_0617 alkyl hydroperoxide reductase, C subunit (RefSeq) 0.32 Sama_3183 response regulator receiver protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.73 SO0958 ahpC alkyl hydroperoxide reductase, C subunit (NCBI ptt file) 0.31 SO4157 DNA-binding response regulator (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.73 Shewana3_3325 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen (RefSeq) 0.31 Shewana3_3697 two component LuxR family transcriptional regulator (RefSeq) low > 73
Marinobacter adhaerens HP15 0.72 HP15_3622 peroxiredoxin 0.39 HP15_1053 two component transcriptional regulator, LuxR family low > 73
Pseudomonas sp. S08-1 0.68 OH686_18680 peroxiredoxin 0.50 OH686_18645 Two-component transcriptional response regulator, LuxR family low > 80
Ralstonia solanacearum PSI07 0.68 RPSI07_RS00930 peroxiredoxin 0.36 RPSI07_RS15805 DNA-binding response regulator
Ralstonia solanacearum GMI1000 0.67 RS_RS18335 peroxiredoxin 0.36 RS_RS08045 DNA-binding response regulator 0.50 42
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF3914 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.35 GFF1673 Nitrogen regulation protein NR(I) low > 90
Ralstonia solanacearum UW163 0.67 UW163_RS22815 peroxiredoxin 0.36 UW163_RS14990 DNA-binding response regulator
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS22270 peroxiredoxin 0.36 RALBFv3_RS01680 DNA-binding response regulator
Variovorax sp. OAS795 0.67 ABID97_RS10800 alkyl hydroperoxide reductase subunit C 0.44 ABID97_RS26300 response regulator
Variovorax sp. SCN45 0.67 GFF2826 Alkyl hydroperoxide reductase protein C (EC 1.11.1.15) 0.36 GFF965 Two-component transcriptional response regulator, LuxR family
Dechlorosoma suillum PS 0.66 Dsui_1901 peroxiredoxin 0.40 Dsui_2511 response regulator low > 51
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS17235 alkyl hydroperoxide reductase subunit C 0.36 ABZR87_RS13480 response regulator transcription factor
Acidovorax sp. GW101-3H11 0.63 Ac3H11_233 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.35 Ac3H11_4095 Nitrogen regulation protein NR(I)
Serratia liquefaciens MT49 0.36 IAI46_04825 peroxiredoxin C 0.29 IAI46_04860 response regulator transcription factor low > 86
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS07870 alkyl hydroperoxide reductase 0.50 RR42_RS25965 LuxR family transcriptional regulator low > 128

Not shown: 44 genomes with orthologs for Psyr_2975 only; 5 genomes with orthologs for Psyr_5088 only