Conservation of cofitness between Psyr_3856 and Psyr_4882 in Pseudomonas syringae pv. syringae B728a

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3856 Helicase c2 1.0 Psyr_4882 protein translocase subunit secB 0.59 5
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3856 Helicase c2 1.00 Psyr_4882 protein translocase subunit secB low > 86
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 0.80 Pf6N2E2_3829 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) low > 103
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_05425 ATP-dependent DNA helicase DinG 0.80 AO356_09755 preprotein translocase subunit SecB low > 104
Pseudomonas simiae WCS417 0.93 PS417_06510 ATP-dependent DNA helicase DinG 0.82 PS417_01620 preprotein translocase subunit SecB low > 88
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_17020 ATP-dependent DNA helicase DinG 0.81 AO353_12130 preprotein translocase subunit SecB low > 101
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.83 PFLU_RS01670 protein-export chaperone SecB low > 109
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 0.85 PfGW456L13_350 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) low > 87
Pseudomonas fluorescens SBW25 0.93 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.83 PFLU_RS01670 protein-export chaperone SecB low > 109
Pseudomonas sp. RS175 0.93 PFR28_00520 ATP-dependent DNA helicase DinG 0.80 PFR28_04941 Protein-export protein SecB low > 88
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 0.85 Pf1N1B4_1614 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) — —
Pseudomonas sp. S08-1 0.89 OH686_04830 ATP-dependent helicase DinG/Rad3 0.79 OH686_14670 protein-export chaperone SecB low > 80
Pseudomonas putida KT2440 0.88 PP_1125 putative Helicase 0.83 PP_5053 Protein-export protein SecB low > 96
Pseudomonas stutzeri RCH2 0.88 Psest_2857 Rad3-related DNA helicases 0.81 Psest_0165 protein-export chaperone SecB low > 67
Marinobacter adhaerens HP15 0.45 HP15_1856 helicase c2 0.59 HP15_3003 protein-export protein SecB low > 73
Shewanella sp. ANA-3 0.34 Shewana3_2630 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.56 Shewana3_0053 preprotein translocase subunit SecB (RefSeq) — —
Shewanella oneidensis MR-1 0.34 SO1819 dinG ATP-dependent helicase DinG (NCBI ptt file) 0.56 SO0052 secB protein-export protein SecB (NCBI ptt file) — —
Shewanella loihica PV-4 0.33 Shew_2483 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.60 Shew_3804 preprotein translocase subunit SecB (RefSeq) — —
Shewanella amazonensis SB2B 0.32 Sama_1249 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.59 Sama_0062 preprotein translocase subunit SecB (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_09290 ATP-dependent DNA helicase DinG 0.53 CSW01_13410 protein-export protein SecB low > 62
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS16845 ATP-dependent DNA helicase DinG 0.45 ABZR86_RS13255 protein-export chaperone SecB — —
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS11005 ATP-dependent DNA helicase DinG 0.44 LRK54_RS10855 protein-export chaperone SecB low > 59
Rhodanobacter denitrificans MT42 0.29 LRK55_RS10710 ATP-dependent DNA helicase DinG 0.44 LRK55_RS10545 protein-export chaperone SecB — —
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_12870 dinG ATP-dependent DNA helicase DinG 0.43 OKGIIK_13020 secB protein-export chaperone SecB — —
Acidovorax sp. GW101-3H11 0.27 Ac3H11_4422 ATP-dependent helicase DinG/Rad3 0.31 Ac3H11_3859 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF2695 ATP-dependent helicase DinG/Rad3 0.34 GFF1223 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) low > 90
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.5017.1 ATP-dependent helicase DinG/Rad3 0.40 Xcc-8004.270.1 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) low > 74
Klebsiella michiganensis M5al 0.22 BWI76_RS08920 ATP-dependent DNA helicase DinG 0.53 BWI76_RS27215 protein-export protein SecB — —
Enterobacter asburiae PDN3 0.22 EX28DRAFT_2193 Rad3-related DNA helicases 0.53 EX28DRAFT_3860 protein-export chaperone SecB — —
Escherichia fergusonii Becca 0.22 EFB2_03306 ATP-dependent DNA helicase DinG 0.53 EFB2_00201 Protein-export protein SecB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF697 ATP-dependent helicase DinG/Rad3 0.53 GFF401 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) low > 78
Escherichia coli Nissle 1917 0.22 ECOLIN_RS04255 ATP-dependent DNA helicase DinG 0.53 ECOLIN_RS20600 protein-export chaperone SecB — —
Escherichia coli ECRC100 0.22 OKFHMN_06280 dinG ATP-dependent DNA helicase DinG 0.53 OKFHMN_15750 secB protein-export chaperone SecB — —
Escherichia coli BW25113 0.22 b0799 dinG ATP-dependent DNA helicase (NCBI) 0.53 b3609 secB export protein SecB (NCBI) low > 76
Escherichia coli ECRC62 0.22 BNILDI_20910 dinG ATP-dependent DNA helicase DinG 0.53 BNILDI_03885 secB protein-export chaperone SecB — —
Escherichia coli BL21 0.22 ECD_00766 ATP-dependent DNA helicase 0.53 ECD_03467 protein export chaperone — —
Escherichia coli ECRC102 0.22 NIAGMN_04325 dinG ATP-dependent DNA helicase DinG 0.53 NIAGMN_13510 secB protein-export chaperone SecB — —
Escherichia coli ECRC98 0.22 JDDGAC_09915 dinG ATP-dependent DNA helicase DinG 0.53 JDDGAC_19375 secB protein-export chaperone SecB — —
Escherichia coli ECRC101 0.22 MCAODC_25495 dinG ATP-dependent DNA helicase DinG 0.53 MCAODC_06260 secB protein-export chaperone SecB — —
Escherichia coli ECOR27 0.22 NOLOHH_22630 dinG ATP-dependent DNA helicase DinG 0.53 NOLOHH_07630 secB protein-export chaperone SecB low > 75
Escherichia coli ECOR38 0.22 HEPCGN_01765 dinG ATP-dependent DNA helicase DinG 0.53 HEPCGN_14590 secB protein-export chaperone SecB — —
Escherichia coli ECRC99 0.22 KEDOAH_21630 dinG ATP-dependent DNA helicase DinG 0.53 KEDOAH_12400 secB protein-export chaperone SecB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_02914 putative ATP-dependent helicase DinG 0.53 OHPLBJKB_00090 Protein-export protein SecB — —
Enterobacter sp. TBS_079 0.22 MPMX20_01426 ATP-dependent DNA helicase DinG 0.53 MPMX20_00124 Protein-export protein SecB — —
Pectobacterium carotovorum WPP14 0.21 HER17_RS13230 ATP-dependent DNA helicase DinG 0.53 HER17_RS20740 protein-export chaperone SecB low > 75
Dickeya dadantii 3937 0.21 DDA3937_RS08765 ATP-dependent DNA helicase DinG 0.52 DDA3937_RS20410 protein-export chaperone SecB low > 74
Dickeya dianthicola 67-19 0.21 HGI48_RS08850 ATP-dependent DNA helicase DinG 0.52 HGI48_RS00790 protein-export chaperone SecB low > 71
Dickeya dianthicola ME23 0.21 DZA65_RS09155 ATP-dependent DNA helicase DinG 0.52 DZA65_RS00845 protein-export chaperone SecB low > 75
Erwinia tracheiphila SCR3 0.20 LU632_RS09400 dinG ATP-dependent DNA helicase DinG 0.53 LU632_RS21880 secB protein-export chaperone SecB low > 74
Pantoea sp. MT58 0.20 IAI47_13295 ATP-dependent DNA helicase DinG 0.53 IAI47_00735 protein-export chaperone SecB low > 76
Serratia liquefaciens MT49 0.20 IAI46_07445 ATP-dependent DNA helicase DinG 0.54 IAI46_24695 protein-export chaperone SecB low > 86
Rahnella sp. WP5 0.20 EX31_RS19020 ATP-dependent DNA helicase DinG 0.53 EX31_RS14345 protein-export chaperone SecB low > 89
Kangiella aquimarina DSM 16071 0.15 B158DRAFT_2492 Rad3-related DNA helicases 0.39 B158DRAFT_0711 protein translocase subunit secB — —
Cupriavidus basilensis FW507-4G11 0.15 RR42_RS07580 helicase 0.34 RR42_RS01840 preprotein translocase subunit SecB — —
Alteromonas macleodii MIT1002 0.14 MIT1002_02593 putative ATP-dependent helicase DinG 0.52 MIT1002_00486 Protein-export protein SecB low > 70
Paraburkholderia bryophila 376MFSha3.1 0.14 H281DRAFT_00533 ATP-dependent DNA helicase DinG 0.38 H281DRAFT_02001 protein translocase subunit secB low > 103
Paraburkholderia sabiae LMG 24235 0.14 QEN71_RS06060 ATP-dependent DNA helicase 0.38 QEN71_RS01460 protein-export chaperone SecB low > 153
Variovorax sp. OAS795 0.13 ABID97_RS14180 ATP-dependent DNA helicase 0.31 ABID97_RS07400 protein-export chaperone SecB low > 91
Ralstonia solanacearum GMI1000 0.09 RS_RS08195 ATP-dependent DNA helicase 0.33 RS_RS01755 protein-export protein SecB low > 80
Ralstonia solanacearum PSI07 0.09 RPSI07_RS15960 ATP-dependent DNA helicase 0.33 RPSI07_RS22395 protein-export chaperone SecB — —
Paraburkholderia graminis OAS925 0.09 ABIE53_002724 ATP-dependent DNA helicase DinG 0.37 ABIE53_000666 preprotein translocase subunit SecB low > 113
Herbaspirillum seropedicae SmR1 0.09 HSERO_RS14855 helicase 0.35 HSERO_RS00805 preprotein translocase subunit SecB low > 78

Not shown: 2 genomes with orthologs for Psyr_3856 only; 21 genomes with orthologs for Psyr_4882 only