Conservation of cofitness between Psyr_0212 and Psyr_4273 in Pseudomonas syringae pv. syringae B728a

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0212 Conserved hypothetical protein 255 1.0 Psyr_4273 Carbon starvation protein CstA 0.34 20
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0212 Conserved hypothetical protein 255 1.00 Psyr_4273 Carbon starvation protein CstA low > 86
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_09265 hypothetical protein 0.91 AO353_13990 carbon starvation protein A low > 101
Pseudomonas sp. DMC3 0.89 GFF416 hypothetical protein 0.91 GFF3956 Pyruvate/proton symporter BtsT — —
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_4364 Protein YicC 0.90 Pf6N2E2_5078 Carbon starvation protein A low > 103
Pseudomonas fluorescens SBW25 0.88 PFLU_RS29495 YicC family protein 0.91 PFLU_RS26210 carbon starvation protein A low > 109
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_12495 hypothetical protein 0.90 AO356_15690 carbon starvation protein A low > 104
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS29495 YicC family protein 0.91 PFLU_RS26210 carbon starvation protein A low > 109
Pseudomonas sp. RS175 0.88 PFR28_04421 hypothetical protein 0.91 PFR28_03790 Pyruvate/proton symporter BtsT — —
Pseudomonas simiae WCS417 0.88 PS417_27815 hypothetical protein 0.91 PS417_24295 carbon starvation protein A low > 88
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_783 Protein YicC 0.89 PfGW456L13_1444 Carbon starvation protein A low > 87
Pseudomonas sp. SVBP6 0.87 COO64_RS01515 YicC/YloC family endoribonuclease 0.91 COO64_RS02980 carbon starvation CstA family protein low > 93
Pseudomonas lactucae CFBP13502 0.87 GEMAOFIL_00031 hypothetical protein 0.91 GEMAOFIL_05011 Pyruvate/proton symporter BtsT low > 93
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_2116 Protein YicC 0.89 Pf1N1B4_4835 Carbon starvation protein A — —
Pseudomonas sp. BP01 0.86 JOY50_RS09020 YicC/YloC family endoribonuclease 0.92 JOY50_RS15670 carbon starvation CstA family protein 0.33 44
Pseudomonas putida KT2440 0.85 PP_5295 conserved protein of unknown function 0.92 PP_4641 putative transporter low > 96
Pseudomonas sp. S08-1 0.84 OH686_13565 UPF0701 protein YicC 0.89 OH686_16210 Carbon starvation protein A low > 80
Pseudomonas aeruginosa PA14 0.83 IKLFDK_26780 YicC-like family N-terminal region 0.86 IKLFDK_00480 carbon starvation protein A low > 100
Alteromonas macleodii MIT1002 0.50 MIT1002_04072 hypothetical protein 0.18 MIT1002_03708 Carbon starvation protein A 0.79 16
Pantoea agglomerans CFBP13505 P0401 0.47 PagCFBP13505_RS18765 YicC family protein 0.63 PagCFBP13505_RS06860 carbon starvation protein A low > 74
Pantoea sp. MT58 0.47 IAI47_00580 YicC family protein 0.64 IAI47_09315 carbon starvation protein A low > 76
Klebsiella michiganensis M5al 0.46 BWI76_RS27395 hypothetical protein 0.70 BWI76_RS03820 carbon starvation protein A low > 92
Dickeya dianthicola 67-19 0.46 HGI48_RS00540 YicC family protein 0.70 HGI48_RS16460 carbon starvation protein A low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS00575 YicC family protein 0.70 DZA65_RS17545 carbon starvation protein A low > 75
Rahnella sp. WP5 0.46 EX31_RS14510 YicC family protein 0.72 EX31_RS00795 carbon starvation protein A low > 89
Dickeya dadantii 3937 0.46 DDA3937_RS20645 YicC family protein 0.72 DDA3937_RS16360 carbon starvation protein A low > 74
Erwinia tracheiphila HP pepo 2.2 0.45 IJEDHG_07725 YicC-like family N-terminal region 0.69 IJEDHG_14695 carbon starvation protein A low > 61
Erwinia tracheiphila SCR3 0.45 LU632_RS22050 YicC family protein 0.69 LU632_RS20450 carbon starvation protein A low > 74
Erwinia amylovora T8 0.45 OLJFJH_05750 YicC-like family N-terminal region 0.70 OLJFJH_08025 carbon starvation protein A low > 58
Pectobacterium carotovorum WPP14 0.45 HER17_RS20905 YicC family protein 0.72 HER17_RS15655 carbon starvation protein A low > 75
Enterobacter sp. TBS_079 0.45 MPMX20_00091 hypothetical protein 0.71 MPMX20_00631 Pyruvate/proton symporter BtsT low > 85
Serratia liquefaciens MT49 0.45 IAI46_24855 YicC family protein 0.72 IAI46_02550 carbon starvation protein A low > 86
Escherichia coli Nissle 1917 0.45 ECOLIN_RS20760 YicC/YloC family endoribonuclease 0.71 ECOLIN_RS24990 pyruvate/proton symporter BtsT low > 55
Escherichia coli BW25113 0.44 b3644 yicC hypothetical protein (NCBI) 0.71 b4354 yjiY putative carbon starvation protein (VIMSS) low > 76
Escherichia coli ECRC99 0.44 KEDOAH_12560 yicC UPF0701 protein YicC 0.71 KEDOAH_16760 btsT pyruvate/proton symporter BtsT — —
Escherichia coli ECRC100 0.44 OKFHMN_15585 yicC UPF0701 protein YicC 0.71 OKFHMN_11385 btsT pyruvate/proton symporter BtsT low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_00058 hypothetical protein 0.71 OHPLBJKB_03720 Pyruvate/proton symporter BtsT low > 74
Escherichia coli ECRC102 0.44 NIAGMN_13345 yicC UPF0701 protein YicC 0.71 NIAGMN_09235 btsT pyruvate/proton symporter BtsT low > 80
Escherichia coli ECRC101 0.44 MCAODC_06095 yicC UPF0701 protein YicC 0.71 MCAODC_01900 btsT pyruvate/proton symporter BtsT low > 88
Escherichia coli ECOR38 0.44 HEPCGN_14405 yicC UPF0701 protein YicC 0.71 HEPCGN_09425 btsT pyruvate/proton symporter BtsT low > 88
Escherichia coli ECOR27 0.44 NOLOHH_07465 yicC UPF0701 protein YicC 0.71 NOLOHH_03765 btsT pyruvate/proton symporter BtsT low > 76
Escherichia coli BL21 0.44 ECD_03501 UPF0701 family protein 0.71 ECD_04220 putative transporter low > 61
Escherichia fergusonii Becca 0.44 EFB2_00169 hypothetical protein 0.71 EFB2_04094 Pyruvate/proton symporter BtsT low > 86
Escherichia coli ECRC62 0.44 BNILDI_04050 yicC UPF0701 protein YicC 0.71 BNILDI_07835 btsT pyruvate/proton symporter BtsT low > 75
Klebsiella pneumoniae MKP103 0.44 KDGMDA_08085 YicC-like family N-terminal region 0.71 KDGMDA_12060 carbon starvation protein A low > 95
Enterobacter asburiae PDN3 0.44 EX28DRAFT_3894 TIGR00255 family protein 0.71 EX28DRAFT_3536 Carbon starvation protein, predicted membrane protein low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF365 Protein YicC 0.68 GFF1008 Carbon starvation protein A paralog low > 78
Escherichia coli ECRC98 0.44 JDDGAC_19210 yicC UPF0701 protein YicC 0.71 JDDGAC_14980 btsT pyruvate/proton symporter BtsT low > 87
Lysobacter sp. OAE881 0.42 ABIE51_RS17280 YicC/YloC family endoribonuclease 0.62 ABIE51_RS15525 carbon starvation CstA family protein low > 62
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS11895 YicC/YloC family endoribonuclease 0.60 ABZR86_RS19270 carbon starvation CstA family protein low > 74
Rhodanobacter sp000427505 FW510-R12 0.41 LRK53_RS16790 YicC family protein 0.60 LRK53_RS05330 carbon starvation protein A low > 59
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS11750 YicC family protein 0.60 LRK54_RS04665 carbon starvation protein A low > 59
Rhodanobacter denitrificans MT42 0.41 LRK55_RS11475 YicC family protein 0.60 LRK55_RS04445 carbon starvation CstA family protein low > 63
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_12145 yicC YicC-like family, N-terminal region 0.60 OKGIIK_11475 cstA Carbon starvation protein CstA (peptide/pyruvate transporter) — —
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.1220.1 Protein YicC 0.77 Xcc-8004.1756.1 Carbon starvation protein A low > 74
Methylophilus sp. DMC18 0.37 GFF2133 hypothetical protein 0.53 GFF1634 Peptide transporter CstA low > 43
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS03650 YicC/YloC family endoribonuclease 0.70 QEN71_RS32880 carbon starvation CstA family protein low > 153
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS04905 hypothetical protein 0.71 RR42_RS20515 large component of pyruvate transporter (cstA-like) (from data) — —
Ralstonia solanacearum PSI07 0.32 RPSI07_RS13855 YicC family protein 0.70 RPSI07_RS23840 carbon starvation protein A low > 81
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS03330 YicC family protein 0.70 RALBFv3_RS09510 carbon starvation protein A low > 76
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS15240 YicC/YloC family endoribonuclease 0.71 ABZR87_RS05220 carbon starvation CstA family protein low > 80
Ralstonia solanacearum GMI1000 0.31 RS_RS10815 YicC family protein 0.71 RS_RS00110 carbon starvation protein A — —
Ralstonia solanacearum UW163 0.31 UW163_RS10390 YicC family protein 0.70 UW163_RS04070 carbon starvation protein A — —
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS10650 hypothetical protein 0.71 HSERO_RS09795 carbon starvation protein A low > 78
Variovorax sp. SCN45 0.28 GFF2378 UPF0701 protein YicC 0.71 GFF1737 Carbon starvation protein A — —
Variovorax sp. OAS795 0.28 ABID97_RS23655 YicC/YloC family endoribonuclease 0.70 ABID97_RS22455 carbon starvation CstA family protein low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF3251 Protein YicC 0.71 GFF3273 Carbon starvation protein A — —
Castellaniella sp019104865 MT123 0.26 ABCV34_RS03510 DUF1732 domain-containing protein 0.50 ABCV34_RS10765 carbon starvation CstA family protein low > 48
Azospirillum sp. SherDot2 0.24 MPMX19_00983 hypothetical protein 0.29 MPMX19_06232 Pyruvate/proton symporter BtsT — —
Desulfovibrio vulgaris Miyazaki F 0.23 DvMF_1140 hypothetical protein (RefSeq) 0.38 DvMF_1227 carbon starvation protein CstA (RefSeq) low > 51
Azospirillum brasilense Sp245 0.23 AZOBR_RS16330 hypothetical protein 0.70 AZOBR_RS18105 carbon starvation protein A — —
Brevundimonas sp. GW460-12-10-14-LB2 0.23 A4249_RS06780 YicC family protein 0.64 A4249_RS00760 carbon starvation CstA family protein low > 48
Rhodospirillum rubrum S1H 0.22 Rru_A0428 hypothetical protein (NCBI) 0.64 Rru_A0259 Carbon starvation protein CstA (NCBI) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.20 Echvi_2830 TIGR00255 family protein 0.16 Echvi_0765 Carbon starvation protein, predicted membrane protein low > 79

Not shown: 37 genomes with orthologs for Psyr_0212 only; 4 genomes with orthologs for Psyr_4273 only