| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_0044 | | transferase hexapeptide repeat protein | 1.0 | Psyr_3457 | | Flagellar FliF M-ring protein | 0.31 | 20 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_0044 | | transferase hexapeptide repeat protein | 1.00 | Psyr_3457 | | Flagellar FliF M-ring protein | — | — |
| Pseudomonas sp. SVBP6 | 0.90 | COO64_RS02330 | | gamma carbonic anhydrase family protein | 0.83 | COO64_RS21280 | fliF | flagellar basal-body MS-ring/collar protein FliF | low | > 93 |
| Pseudomonas putida KT2440 | 0.87 | PP_0095 | | putative enzyme of unknown function | 0.78 | PP_4369 | | Flagellar M-ring protein | low | > 96 |
| Pseudomonas sp. BP01 | 0.86 | JOY50_RS21250 | | gamma carbonic anhydrase family protein | 0.78 | JOY50_RS00685 | fliF | flagellar basal-body MS-ring/collar protein FliF | low | > 84 |
| Pseudomonas simiae WCS417 | 0.86 | PS417_00240 | | anhydrase | 0.82 | PS417_19805 | | flagellar M-ring protein FliF | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.85 | PFLU_RS00235 | | gamma carbonic anhydrase family protein | 0.81 | PFLU_RS21775 | | flagellar basal body M-ring protein FliF | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.85 | PFLU_RS00235 | | gamma carbonic anhydrase family protein | 0.81 | PFLU_RS21775 | | flagellar basal body M-ring protein FliF | low | > 109 |
| Pseudomonas lactucae CFBP13502 | 0.85 | GEMAOFIL_00253 | | Protein YrdA | 0.82 | GEMAOFIL_04159 | | Flagellar M-ring protein | low | > 96 |
| Pseudomonas orientalis W4I3 | 0.84 | QF045_RS03185 | | gamma carbonic anhydrase family protein | 0.81 | QF045_RS21935 | | flagellar basal-body MS-ring/collar protein FliF | low | > 93 |
| Pseudomonas fluorescens FW300-N2E3 | 0.84 | AO353_10770 | | anhydrase | 0.84 | AO353_18680 | | flagellar M-ring protein FliF | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.84 | Pf1N1B4_1843 | | carbonic anhydrase, family 3 | 0.84 | Pf1N1B4_3604 | | Flagellar M-ring protein FliF | low | > 87 |
| Pseudomonas sp. DMC3 | 0.83 | GFF664 | | Protein YrdA | 0.83 | GFF2449 | | Flagellar M-ring protein | low | > 89 |
| Pseudomonas fluorescens GW456-L13 | 0.83 | PfGW456L13_625 | | carbonic anhydrase, family 3 | 0.83 | PfGW456L13_4353 | | Flagellar M-ring protein FliF | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.83 | Psest_4319 | | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily | 0.74 | Psest_1719 | | flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) | low | > 67 |
| Pseudomonas sp. S08-1 | 0.83 | OH686_12365 | | Protein YrdA | 0.73 | OH686_02835 | | flagellar M-ring protein FliF | low | > 80 |
| Pseudomonas sp. RS175 | 0.82 | PFR28_04700 | | Protein YrdA | 0.83 | PFR28_00832 | | Flagellar M-ring protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.82 | AO356_11115 | | anhydrase | 0.83 | AO356_03835 | | flagellar M-ring protein FliF | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.81 | Pf6N2E2_4090 | | carbonic anhydrase, family 3 | 0.83 | Pf6N2E2_2593 | | Flagellar M-ring protein FliF | low | > 103 |
| Cupriavidus basilensis FW507-4G11 | 0.81 | RR42_RS06425 | | anhydrase | 0.19 | RR42_RS23570 | | flagellar M-ring protein FliF | low | > 128 |
| Pseudomonas aeruginosa MRSN321 | 0.79 | DY961_RS26595 | | gamma carbonic anhydrase family protein | 0.75 | DY961_RS06945 | fliF;go_component=bacterial-type | flagellar basal-body MS-ring/collar protein FliF | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.79 | DQ20_RS31165 | | gamma carbonic anhydrase family protein | 0.75 | DQ20_RS45890 | fliF;go_component=bacterial-type | flagellar basal-body MS-ring/collar protein FliF | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.79 | IKLFDK_25220 | | gamma carbonic anhydrase family protein | 0.75 | IKLFDK_05065 | | flagellar M-ring protein FliF | low | > 98 |
| Pseudomonas segetis P6 | 0.77 | MPMX49_00360 | | Protein YrdA | 0.74 | MPMX49_03145 | | Flagellar M-ring protein | low | > 75 |
| Rahnella sp. WP5 | 0.66 | EX31_RS15945 | | gamma carbonic anhydrase family protein | 0.26 | EX31_RS09540 | | flagellar basal body M-ring protein FliF | low | > 89 |
| Marinobacter adhaerens HP15 | 0.65 | HP15_3758 | | transferase hexapeptide repeat protein | 0.42 | HP15_2326 | | flagellar MS-ring protein | 0.76 | 9 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.64 | OHPLBJKB_00424 | | Protein YrdA | 0.24 | OHPLBJKB_01791 | | Flagellar M-ring protein | low | > 74 |
| Shewanella amazonensis SB2B | 0.64 | Sama_0054 | | carbonic anhydrase (RefSeq) | 0.25 | Sama_2297 | fliF | flagellar MS-ring protein (RefSeq) | low | > 62 |
| Escherichia coli ECRC99 | 0.64 | KEDOAH_10575 | yrdA | Protein YrdA | 0.24 | KEDOAH_02380 | fliF | flagellar M-ring protein FliF | — | — |
| Escherichia coli BW25113 | 0.64 | b3279 | yrdA | putative transferase (VIMSS) | 0.24 | b1938 | fliF | flagellar M-ring protein (NCBI) | low | > 76 |
| Escherichia coli ECRC98 | 0.64 | JDDGAC_21195 | yrdA | Protein YrdA | 0.24 | JDDGAC_00300 | fliF | flagellar M-ring protein FliF | low | > 87 |
| Escherichia coli ECOR38 | 0.64 | HEPCGN_16395 | yrdA | Protein YrdA | 0.24 | HEPCGN_04075 | fliF | flagellar M-ring protein FliF | low | > 88 |
| Escherichia coli ECOR27 | 0.64 | NOLOHH_09365 | yrdA | Protein YrdA | 0.24 | NOLOHH_16345 | fliF | flagellar M-ring protein FliF | low | > 76 |
| Escherichia coli ECRC100 | 0.64 | OKFHMN_17575 | yrdA | Protein YrdA | 0.24 | OKFHMN_25715 | fliF | flagellar M-ring protein FliF | low | > 79 |
| Escherichia coli ECRC62 | 0.64 | BNILDI_02155 | yrdA | Protein YrdA | 0.24 | BNILDI_15135 | fliF | flagellar M-ring protein FliF | low | > 75 |
| Escherichia coli ECRC102 | 0.64 | NIAGMN_15335 | yrdA | Protein YrdA | 0.24 | NIAGMN_02340 | fliF | flagellar M-ring protein FliF | low | > 80 |
| Escherichia coli ECRC101 | 0.64 | MCAODC_08095 | yrdA | Protein YrdA | 0.24 | MCAODC_19680 | fliF | flagellar M-ring protein FliF | low | > 87 |
| Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_00290 | | gamma carbonic anhydrase family protein | 0.21 | CSW01_10650 | | flagellar basal body M-ring protein FliF | low | > 62 |
| Shewanella oneidensis MR-1 | 0.64 | SO0042 | | carbonic anhydrase, family 3 (NCBI ptt file) | 0.25 | SO3228 | fliF | flagellar M-ring protein FliF (NCBI ptt file) | low | > 76 |
| Serratia liquefaciens MT49 | 0.64 | IAI46_23235 | | gamma carbonic anhydrase family protein | 0.22 | IAI46_15840 | | flagellar M-ring protein FliF | low | > 87 |
| Shewanella sp. ANA-3 | 0.64 | Shewana3_0045 | | carbonic anhydrase (RefSeq) | 0.25 | Shewana3_1342 | fliF | flagellar MS-ring protein (RefSeq) | low | > 73 |
| Pectobacterium carotovorum WPP14 | 0.63 | HER17_RS02260 | | gamma carbonic anhydrase family protein | 0.21 | HER17_RS08280 | | flagellar M-ring protein FliF | low | > 75 |
| Escherichia fergusonii Becca | 0.63 | EFB2_00544 | | Protein YrdA | 0.24 | EFB2_02008 | | Flagellar M-ring protein | low | > 86 |
| Pantoea agglomerans CFBP13505 P0401 | 0.63 | PagCFBP13505_RS22570 | | gamma carbonic anhydrase family protein | 0.23 | PagCFBP13505_RS01940 | | flagellar basal body M-ring protein FliF | low | > 74 |
| Escherichia coli Nissle 1917 | 0.63 | ECOLIN_RS18830 | | gamma carbonic anhydrase family protein | 0.24 | ECOLIN_RS11060 | | flagellar basal-body MS-ring/collar protein FliF | low | > 55 |
| Shewanella loihica PV-4 | 0.63 | Shew_3725 | | carbonic anhydrase (RefSeq) | 0.25 | Shew_1366 | fliF | flagellar MS-ring protein (RefSeq) | 0.26 | 27 |
| Enterobacter asburiae PDN3 | 0.63 | EX28DRAFT_0048 | | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily | 0.23 | EX28DRAFT_0616 | | flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.62 | MPMX20_04187 | | Protein YrdA | 0.23 | MPMX20_02935 | | Flagellar M-ring protein | low | > 85 |
| Alteromonas macleodii MIT1002 | 0.62 | MIT1002_00030 | | carnitine operon protein CaiE | 0.26 | MIT1002_01085 | | Flagellar M-ring protein | low | > 70 |
| Dickeya dadantii 3937 | 0.61 | DDA3937_RS19090 | | gamma carbonic anhydrase family protein | 0.23 | DDA3937_RS13365 | | flagellar M-ring protein FliF | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.61 | GFF2399 | | carbonic anhydrase, family 3 | 0.23 | GFF4018 | | Flagellar M-ring protein FliF | low | > 78 |
| Dickeya dianthicola 67-19 | 0.61 | HGI48_RS19180 | | gamma carbonic anhydrase family protein | 0.23 | HGI48_RS13410 | | flagellar M-ring protein FliF | low | > 71 |
| Dickeya dianthicola ME23 | 0.61 | DZA65_RS20305 | | gamma carbonic anhydrase family protein | 0.23 | DZA65_RS13895 | | flagellar basal body M-ring protein FliF | low | > 75 |
| Erwinia amylovora T8 | 0.60 | OLJFJH_03675 | | gamma carbonic anhydrase family protein | 0.25 | OLJFJH_09920 | | flagellar M-ring protein FliF | low | > 58 |
| Pantoea sp. MT58 | 0.59 | IAI47_02325 | | gamma carbonic anhydrase family protein | 0.23 | IAI47_08030 | | flagellar M-ring protein FliF | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.54 | Ac3H11_4230 | | carbonic anhydrase, family 3 | 0.24 | Ac3H11_1404 | | Flagellar M-ring protein FliF | low | > 79 |
| Dechlorosoma suillum PS | 0.53 | Dsui_2380 | | isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase | 0.26 | Dsui_1756 | | flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF | low | > 51 |
| Dyella japonica UNC79MFTsu3.2 | 0.53 | ABZR86_RS14950 | | gamma carbonic anhydrase family protein | 0.29 | ABZR86_RS20170 | | flagellar basal-body MS-ring/collar protein FliF | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.52 | OKGIIK_15375 | | Carnitine operon protein CaiE | 0.23 | OKGIIK_02745 | fliF | flagellar M-ring protein FliF | low | > 53 |
| Rhodanobacter sp000427505 FW510-R12 | 0.52 | LRK53_RS02385 | | gamma carbonic anhydrase family protein | 0.23 | LRK53_RS15080 | | flagellar M-ring protein FliF | low | > 59 |
| Rhodanobacter denitrificans FW104-10B01 | 0.51 | LRK54_RS08610 | | gamma carbonic anhydrase family protein | 0.25 | LRK54_RS13495 | | flagellar M-ring protein FliF | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.51 | LRK55_RS08375 | | gamma carbonic anhydrase family protein | 0.25 | LRK55_RS13235 | | flagellar basal-body MS-ring/collar protein FliF | low | > 63 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.51 | Xcc-8004.456.1 | | carbonic anhydrase, family 3 | 0.25 | Xcc-8004.2809.1 | | Flagellar M-ring protein FliF | low | > 74 |
| Lysobacter sp. OAE881 | 0.50 | ABIE51_RS01770 | | gamma carbonic anhydrase family protein | 0.27 | ABIE51_RS16780 | | flagellar basal-body MS-ring/collar protein FliF | low | > 62 |
| Rhodospirillum rubrum S1H | 0.45 | Rru_A2420 | | transferase hexapeptide repeat (NCBI) | 0.19 | Rru_A0545 | | Flagellar FliF M-ring protein (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.42 | AMB_RS09070 | | gamma carbonic anhydrase family protein | 0.18 | AMB_RS02590 | | flagellar M-ring protein FliF | low | > 64 |
| Sphingobium sp. HT1-2 | 0.39 | GFF1600 | | Carbonic anhydrase, gamma class (EC 4.2.1.1) | 0.21 | GFF3728 | | Flagellar M-ring protein FliF | low | > 95 |
Not shown: 20 genomes with orthologs for Psyr_0044 only; 27 genomes with orthologs for Psyr_3457 only