Conservation of cofitness between Psyr_3856 and Psyr_3281 in Pseudomonas syringae pv. syringae B728a

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3856 Helicase c2 1.0 Psyr_3281 Glycoside hydrolase, family 3, N-terminal 0.50 19
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3856 Helicase c2 1.00 Psyr_3281 Glycoside hydrolase, family 3, N-terminal — —
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 0.85 Pf6N2E2_2281 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) low > 103
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_05425 ATP-dependent DNA helicase DinG 0.85 AO356_02285 beta-hexosaminidase low > 104
Pseudomonas simiae WCS417 0.93 PS417_06510 ATP-dependent DNA helicase DinG 0.87 PS417_07620 beta-hexosaminidase low > 88
Pseudomonas fluorescens SBW25 0.93 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.88 PFLU_RS07695 beta-N-acetylhexosaminidase low > 109
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 0.89 PfGW456L13_4031 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) low > 87
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.88 PFLU_RS07695 beta-N-acetylhexosaminidase 0.19 67
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_17020 ATP-dependent DNA helicase DinG 0.89 AO353_00455 beta-hexosaminidase low > 101
Pseudomonas sp. RS175 0.93 PFR28_00520 ATP-dependent DNA helicase DinG 0.86 PFR28_01119 Beta-hexosaminidase low > 88
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 0.89 Pf1N1B4_3912 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) — —
Pseudomonas sp. S08-1 0.89 OH686_04830 ATP-dependent helicase DinG/Rad3 0.81 OH686_21975 beta-N-acetylglucosaminidase low > 80
Pseudomonas putida KT2440 0.88 PP_1125 putative Helicase 0.82 PP_2145 beta-N-acetylglucosaminidase low > 96
Pseudomonas stutzeri RCH2 0.88 Psest_2857 Rad3-related DNA helicases 0.72 Psest_2643 Beta-glucosidase-related glycosidases 0.24 19
Shewanella sp. ANA-3 0.34 Shewana3_2630 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.42 Shewana3_2293 beta-hexosaminidase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.34 SO1819 dinG ATP-dependent helicase DinG (NCBI ptt file) 0.42 SO2250 nagZ beta-hexosaminidase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.33 Shew_2483 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.44 Shew_1626 beta-hexosaminidase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.32 Sama_1249 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.41 Sama_1326 beta-hexosaminidase (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_09290 ATP-dependent DNA helicase DinG 0.41 CSW01_03620 beta-hexosaminidase low > 62
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS16845 ATP-dependent DNA helicase DinG 0.36 ABZR86_RS07110 beta-N-acetylhexosaminidase — —
Rhodanobacter denitrificans MT42 0.29 LRK55_RS10710 ATP-dependent DNA helicase DinG 0.36 LRK55_RS16725 beta-N-acetylhexosaminidase — —
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS11005 ATP-dependent DNA helicase DinG 0.36 LRK54_RS17010 beta-N-acetylhexosaminidase — —
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_12870 dinG ATP-dependent DNA helicase DinG 0.35 OKGIIK_07830 nagZ beta-N-acetylhexosaminidase — —
Acidovorax sp. GW101-3H11 0.27 Ac3H11_4422 ATP-dependent helicase DinG/Rad3 0.42 Ac3H11_1561 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF2695 ATP-dependent helicase DinG/Rad3 0.39 GFF3351 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) low > 90
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.5017.1 ATP-dependent helicase DinG/Rad3 0.33 Xcc-8004.3663.1 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) low > 74
Klebsiella michiganensis M5al 0.22 BWI76_RS08920 ATP-dependent DNA helicase DinG 0.42 BWI76_RS11165 beta-N-acetylhexosaminidase low > 92
Enterobacter asburiae PDN3 0.22 EX28DRAFT_2193 Rad3-related DNA helicases 0.41 EX28DRAFT_1823 Beta-glucosidase-related glycosidases low > 76
Escherichia coli Nissle 1917 0.22 ECOLIN_RS04255 ATP-dependent DNA helicase DinG 0.42 ECOLIN_RS06390 beta-N-acetylhexosaminidase — —
Escherichia fergusonii Becca 0.22 EFB2_03306 ATP-dependent DNA helicase DinG 0.43 EFB2_02868 Beta-hexosaminidase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF697 ATP-dependent helicase DinG/Rad3 0.41 GFF3390 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) low > 78
Escherichia coli ECRC62 0.22 BNILDI_20910 dinG ATP-dependent DNA helicase DinG 0.43 BNILDI_19195 nagZ beta-N-acetylhexosaminidase low > 75
Escherichia coli BL21 0.22 ECD_00766 ATP-dependent DNA helicase 0.43 ECD_01103 beta N-acetyl-glucosaminidase low > 61
Escherichia coli ECRC101 0.22 MCAODC_25495 dinG ATP-dependent DNA helicase DinG 0.43 MCAODC_22865 nagZ beta-N-acetylhexosaminidase low > 87
Escherichia coli ECRC100 0.22 OKFHMN_06280 dinG ATP-dependent DNA helicase DinG 0.43 OKFHMN_03505 nagZ beta-N-acetylhexosaminidase low > 80
Escherichia coli ECOR27 0.22 NOLOHH_22630 dinG ATP-dependent DNA helicase DinG 0.43 NOLOHH_21035 nagZ beta-N-acetylhexosaminidase low > 75
Escherichia coli BW25113 0.22 b0799 dinG ATP-dependent DNA helicase (NCBI) 0.43 b1107 nagZ beta-hexosaminidase (NCBI) low > 76
Escherichia coli ECRC102 0.22 NIAGMN_04325 dinG ATP-dependent DNA helicase DinG 0.43 NIAGMN_24325 nagZ beta-N-acetylhexosaminidase — —
Escherichia coli ECRC98 0.22 JDDGAC_09915 dinG ATP-dependent DNA helicase DinG 0.43 JDDGAC_07165 nagZ beta-N-acetylhexosaminidase low > 86
Escherichia coli ECOR38 0.22 HEPCGN_01765 dinG ATP-dependent DNA helicase DinG 0.43 HEPCGN_23980 nagZ beta-N-acetylhexosaminidase low > 87
Escherichia coli ECRC99 0.22 KEDOAH_21630 dinG ATP-dependent DNA helicase DinG 0.43 KEDOAH_24250 nagZ beta-N-acetylhexosaminidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_02914 putative ATP-dependent helicase DinG 0.43 OHPLBJKB_02559 Beta-hexosaminidase low > 73
Enterobacter sp. TBS_079 0.22 MPMX20_01426 ATP-dependent DNA helicase DinG 0.41 MPMX20_01788 Beta-hexosaminidase low > 85
Pectobacterium carotovorum WPP14 0.21 HER17_RS13230 ATP-dependent DNA helicase DinG 0.44 HER17_RS08725 beta-N-acetylhexosaminidase low > 75
Dickeya dadantii 3937 0.21 DDA3937_RS08765 ATP-dependent DNA helicase DinG 0.41 DDA3937_RS13050 beta-N-acetylhexosaminidase low > 74
Dickeya dianthicola ME23 0.21 DZA65_RS09155 ATP-dependent DNA helicase DinG 0.40 DZA65_RS13585 beta-N-acetylhexosaminidase low > 75
Dickeya dianthicola 67-19 0.21 HGI48_RS08850 ATP-dependent DNA helicase DinG 0.41 HGI48_RS13115 beta-N-acetylhexosaminidase low > 71
Serratia liquefaciens MT49 0.20 IAI46_07445 ATP-dependent DNA helicase DinG 0.42 IAI46_09900 beta-N-acetylhexosaminidase low > 86
Pantoea sp. MT58 0.20 IAI47_13295 ATP-dependent DNA helicase DinG 0.41 IAI47_11995 beta-N-acetylhexosaminidase low > 76
Erwinia tracheiphila SCR3 0.20 LU632_RS09400 dinG ATP-dependent DNA helicase DinG 0.45 LU632_RS14755 nagZ beta-N-acetylhexosaminidase low > 74
Rahnella sp. WP5 0.20 EX31_RS19020 ATP-dependent DNA helicase DinG 0.42 EX31_RS24500 beta-N-acetylhexosaminidase low > 89
Kangiella aquimarina DSM 16071 0.15 B158DRAFT_2492 Rad3-related DNA helicases 0.45 B158DRAFT_1585 Beta-glucosidase-related glycosidases low > 40
Cupriavidus basilensis FW507-4G11 0.15 RR42_RS07580 helicase 0.42 RR42_RS14015 beta-hexosaminidase low > 128
Alteromonas macleodii MIT1002 0.14 MIT1002_02593 putative ATP-dependent helicase DinG 0.36 MIT1002_01643 Beta-hexosaminidase low > 70
Paraburkholderia bryophila 376MFSha3.1 0.14 H281DRAFT_00533 ATP-dependent DNA helicase DinG 0.43 H281DRAFT_04367 beta-N-acetylhexosaminidase low > 103
Paraburkholderia sabiae LMG 24235 0.14 QEN71_RS06060 ATP-dependent DNA helicase 0.42 QEN71_RS04635 beta-N-acetylhexosaminidase low > 153
Ralstonia solanacearum GMI1000 0.09 RS_RS08195 ATP-dependent DNA helicase 0.43 RS_RS05290 beta-N-acetylhexosaminidase low > 80
Paraburkholderia graminis OAS925 0.09 ABIE53_002724 ATP-dependent DNA helicase DinG 0.43 ABIE53_003031 beta-N-acetylhexosaminidase low > 113
Ralstonia solanacearum PSI07 0.09 RPSI07_RS15960 ATP-dependent DNA helicase 0.43 RPSI07_RS18950 beta-N-acetylhexosaminidase — —
Herbaspirillum seropedicae SmR1 0.09 HSERO_RS14855 helicase 0.42 HSERO_RS09685 beta-hexosaminidase — —
Caulobacter crescentus NA1000 Δfur 0.05 CCNA_02118 ATP-dependent helicase, dinG family 0.25 CCNA_02085 anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase low > 67
Caulobacter crescentus NA1000 0.05 CCNA_02118 ATP-dependent helicase, dinG family 0.25 CCNA_02085 anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase low > 66

Not shown: 2 genomes with orthologs for Psyr_3856 only; 16 genomes with orthologs for Psyr_3281 only