Conservation of cofitness between Psyr_4231 and Psyr_3196 in Pseudomonas syringae pv. syringae B728a

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4231 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal 1.0 Psyr_3196 isocitrate lyase 0.32 10
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4231 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal 1.00 Psyr_3196 isocitrate lyase low > 86
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_5049 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) 0.97 PfGW456L13_2633 Isocitrate lyase (EC 4.1.3.1) low > 87
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_05340 histidine kinase 0.97 AO353_27735 isocitrate lyase low > 101
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_1116 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) 0.97 Pf1N1B4_4042 Isocitrate lyase (EC 4.1.3.1) (from data) low > 87
Pseudomonas simiae WCS417 0.77 PS417_04095 histidine kinase 0.97 PS417_16570 isocitrate lyase — —
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_3303 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) 0.96 Pf6N2E2_279 Isocitrate lyase (EC 4.1.3.1) low > 103
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS04135 HAMP domain-containing histidine kinase 0.97 PFLU_RS18610 isocitrate lyase low > 109
Pseudomonas fluorescens SBW25 0.76 PFLU_RS04135 HAMP domain-containing histidine kinase 0.97 PFLU_RS18610 isocitrate lyase low > 109
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_07210 histidine kinase 0.97 AO356_22080 isocitrate lyase low > 104
Pseudomonas sp. RS175 0.73 PFR28_00136 Sensor histidine kinase RegB 0.97 PFR28_02625 Isocitrate lyase — —
Pseudomonas putida KT2440 0.73 PP_0887 Sensor histidine kinase 0.96 PP_4116 isocitrate lyase low > 96
Pseudomonas sp. S08-1 0.64 OH686_08685 Sensor histidine kinase PrrB (RegB) 0.15 OH686_00170 Isocitrate lyase low > 80
Pseudomonas stutzeri RCH2 0.60 Psest_3339 Signal transduction histidine kinase 0.15 Psest_2014 Isocitrate lyase (EC 4.1.3.1) (from data) low > 67
Dechlorosoma suillum PS 0.27 Dsui_1181 signal transduction histidine kinase 0.71 Dsui_0011 isocitrate lyase low > 51
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS00320 ATP-binding protein 0.69 QEN71_RS06270 isocitrate lyase — —
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS10110 ATP-binding protein 0.68 ABZR86_RS13490 isocitrate lyase low > 74
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS01090 histidine kinase 0.68 RR42_RS12200 isocitrate lyase low > 128
Paraburkholderia graminis OAS925 0.22 ABIE53_000419 two-component system sensor histidine kinase RegB 0.71 ABIE53_002536 isocitrate lyase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_02209 two-component system, sensor histidine kinase RegB 0.71 H281DRAFT_00580 isocitrate lyase — —
Ralstonia solanacearum PSI07 0.22 RPSI07_RS23755 sensor histidine kinase 0.68 RPSI07_RS17335 isocitrate lyase low > 81
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05140 ATP-binding protein 0.68 ABZR87_RS11590 isocitrate lyase low > 80
Ralstonia solanacearum UW163 0.21 UW163_RS03970 sensor histidine kinase 0.68 UW163_RS13480 isocitrate lyase — —
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS09610 sensor histidine kinase 0.68 RALBFv3_RS00150 isocitrate lyase low > 76
Ralstonia solanacearum GMI1000 0.21 RS_RS00195 sensor histidine kinase 0.68 RS_RS06810 isocitrate lyase low > 80
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS01620 sensor histidine kinase 0.70 BPHYT_RS12285 isocitrate lyase low > 109
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS13005 histidine kinase 0.71 HSERO_RS10565 isocitrate lyase low > 78
Variovorax sp. OAS795 0.20 ABID97_RS07615 ATP-binding protein 0.75 ABID97_RS11115 isocitrate lyase low > 91
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS04035 ATP-binding protein 0.67 LRK54_RS10585 isocitrate lyase low > 59
Variovorax sp. SCN45 0.19 GFF5673 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) 0.70 GFF4829 Isocitrate lyase (EC 4.1.3.1) low > 127
Rhodanobacter denitrificans MT42 0.19 LRK55_RS03805 histidine kinase dimerization/phospho-acceptor domain-containing protein 0.67 LRK55_RS10225 isocitrate lyase low > 63
Azospirillum sp. SherDot2 0.19 MPMX19_06180 Sensor histidine kinase RegB 0.57 MPMX19_05830 Isocitrate lyase low > 112
Acidovorax sp. GW101-3H11 0.19 Ac3H11_3146 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) 0.70 Ac3H11_2831 Isocitrate lyase (EC 4.1.3.1) (from data) low > 79
Azospirillum brasilense Sp245 0.19 AZOBR_RS23155 histidine kinase 0.55 AZOBR_RS02405 isocitrate lyase low > 97
Shewanella loihica PV-4 0.18 Shew_3343 integral membrane sensor signal transduction histidine kinase (RefSeq) 0.78 Shew_1276 Isocitrate lyase (EC 4.1.3.1) (from data) low > 60
Rhodanobacter sp. FW510-T8 0.17 OKGIIK_10895 Histidine kinase 0.68 OKGIIK_13320 aceA isocitrate lyase low > 52
Brevundimonas sp. GW460-12-10-14-LB2 0.17 A4249_RS04470 ATP-binding protein 0.55 A4249_RS02595 isocitrate lyase low > 48
Rhodopseudomonas palustris CGA009 0.17 TX73_002965 ActS/PrrB/RegB family redox-sensitive histidine kinase 0.15 TX73_022775 isocitrate lyase — —
Rhizobium sp. OAE497 0.16 ABIE40_RS19510 ActS/PrrB/RegB family redox-sensitive histidine kinase 0.57 ABIE40_RS03255 isocitrate lyase low > 107
Shewanella amazonensis SB2B 0.16 Sama_3187 sensor histidine kinase (RefSeq) 0.78 Sama_2380 Isocitrate lyase (EC 4.1.3.1) (from data) low > 62
Shewanella oneidensis MR-1 0.16 SO4173 sensor histidine kinase (NCBI ptt file) 0.78 SO1484 aceA Isocitrate lyase (EC 4.1.3.1) (from data) low > 76
Agrobacterium fabrum C58 0.16 Atu0051 two component sensor kinase 0.58 Atu0607 isocitrate lyase low > 89
Sinorhizobium meliloti 1021 0.16 SMc02585 sensor histidine kinase transmembrane protein 0.57 SMc00768 isocitrate lyase — —
Shewanella sp. ANA-3 0.15 Shewana3_3708 ATPase domain-containing protein (RefSeq) 0.78 Shewana3_2942 isocitrate lyase (RefSeq) low > 73
Xanthomonas campestris pv. campestris strain 8004 0.15 Xcc-8004.3040.1 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) 0.67 Xcc-8004.311.1 Isocitrate lyase (EC 4.1.3.1) low > 74

Not shown: 5 genomes with orthologs for Psyr_4231 only; 32 genomes with orthologs for Psyr_3196 only