Conservation of cofitness between Psyr_4018 and Psyr_0704 in Pseudomonas syringae pv. syringae B728a

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4018 Formyltetrahydrofolate deformylase 1.0 Psyr_0704 glutamate 5-kinase 0.72 12
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4018 Formyltetrahydrofolate deformylase 1.00 Psyr_0704 glutamate 5-kinase 0.74 25
Pseudomonas lactucae CFBP13502 0.92 GEMAOFIL_04667 Formyltetrahydrofolate deformylase 0.94 GEMAOFIL_04860 Glutamate 5-kinase low > 96
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_5508 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.89 Pf6N2E2_5103 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA low > 103
Pseudomonas sp. RS175 0.92 PFR28_03439 Formyltetrahydrofolate deformylase 0.89 PFR28_03769 Glutamate 5-kinase — —
Pseudomonas fluorescens SBW25 0.92 PFLU_RS24200 formyltetrahydrofolate deformylase 0.93 PFLU_RS25360 glutamate 5-kinase — —
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS24200 formyltetrahydrofolate deformylase 0.93 PFLU_RS25360 glutamate 5-kinase — —
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_17895 formyltetrahydrofolate deformylase 0.89 AO356_15815 gamma-glutamyl kinase — —
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_03710 formyltetrahydrofolate deformylase 0.89 AO353_14115 gamma-glutamyl kinase low > 101
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_665 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.93 Pf1N1B4_2800 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA — —
Pseudomonas simiae WCS417 0.91 PS417_22565 formyltetrahydrofolate deformylase 0.93 PS417_23545 gamma-glutamyl kinase low > 88
Pseudomonas orientalis W4I3 0.91 QF045_RS24740 formyltetrahydrofolate deformylase 0.93 QF045_RS25800 glutamate 5-kinase — —
Pseudomonas sp. S08-1 0.91 OH686_18295 formyltetrahydrofolate deformylase 0.86 OH686_16305 Glutamate 5-kinase / RNA-binding C-terminal domain PUA low > 80
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_1825 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.88 PfGW456L13_1472 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA — —
Pseudomonas sp. DMC3 0.89 GFF5213 Formyltetrahydrofolate deformylase 0.89 GFF3983 Glutamate 5-kinase — —
Pseudomonas putida KT2440 0.89 PP_1367 formyltetrahydrofolate hydrolase 0.86 PP_0691 Glutamate 5-kinase low > 96
Pseudomonas sp. SVBP6 0.89 COO64_RS12215 purU formyltetrahydrofolate deformylase 0.88 COO64_RS03090 proB glutamate 5-kinase — —
Pseudomonas sp. BP01 0.88 JOY50_RS14345 purU formyltetrahydrofolate deformylase 0.85 JOY50_RS24725 proB glutamate 5-kinase — —
Pseudomonas segetis P6 0.87 ACVTMO_RS17985 purU formyltetrahydrofolate deformylase 0.85 ACVTMO_RS19550 proB glutamate 5-kinase — —
Pseudomonas aeruginosa PUPa3 0.86 DQ20_RS57375 purU;go_function=formyltetrahydrofolate formyltetrahydrofolate deformylase 0.87 DQ20_RS56085 proB;go_function=glutamate glutamate 5-kinase low > 101
Pseudomonas aeruginosa MRSN321 0.86 DY961_RS24925 purU;go_function=formyltetrahydrofolate formyltetrahydrofolate deformylase 0.87 DY961_RS23620 proB;go_function=glutamate glutamate 5-kinase low > 100
Pseudomonas aeruginosa PA14 0.86 IKLFDK_02535 formyltetrahydrofolate deformylase 0.87 IKLFDK_00700 Glutamate 5-kinase — —
Pseudomonas stutzeri RCH2 0.86 Psest_3178 formyltetrahydrofolate deformylase 0.78 Psest_3384 glutamate 5-kinase 0.37 19
Dechlorosoma suillum PS 0.67 Dsui_0762 formyltetrahydrofolate deformylase 0.62 Dsui_0166 glutamate 5-kinase — —
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS33925 formyltetrahydrofolate deformylase 0.60 QEN71_RS27270 glutamate 5-kinase low > 153
Marinobacter adhaerens HP15 0.61 HP15_1358 formyltetrahydrofolate deformylase 0.62 HP15_508 gamma-glutamyl kinase — —
Alteromonas macleodii MIT1002 0.60 MIT1002_00404 Formyltetrahydrofolate deformylase 0.31 MIT1002_04056 Glutamate 5-kinase low > 70
Methylophilus sp. DMC18 0.50 GFF2208 Formyltetrahydrofolate deformylase 0.58 GFF1767 Glutamate 5-kinase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.48 Echvi_1543 formyltetrahydrofolate deformylase 0.29 Echvi_4033 glutamate 5-kinase (EC 2.7.2.11) (from data) low > 79
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_1821 formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.29 Ga0059261_3512 glutamate 5-kinase (EC 2.7.2.11) (from data) low > 68
Bacteroides thetaiotaomicron VPI-5482 0.45 BT1381 formyltetrahydrofolate deformylase (NCBI ptt file) 0.25 BT3719 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.87 21
Bacteroides ovatus ATCC 8483 0.45 BACOVA_00222 formyltetrahydrofolate deformylase 0.26 BACOVA_03537 glutamate 5-kinase 0.93 1
Synechocystis sp000284455 PCC 6803 0.45 SGL_RS13830 formyltetrahydrofolate deformylase 0.36 SGL_RS04550 glutamate 5-kinase low > 52
Phocaeicola dorei CL03T12C01 0.44 ABI39_RS19915 formyltetrahydrofolate deformylase 0.25 ABI39_RS02880 glutamate 5-kinase low > 72
Bacteroides stercoris CC31F 0.43 HMPREF1181_RS11085 formyltetrahydrofolate deformylase 0.27 HMPREF1181_RS03325 glutamate 5-kinase 0.77 23
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS06160 formyltetrahydrofolate deformylase 0.27 HMPREF1058_RS08650 glutamate 5-kinase 0.75 18
Acinetobacter radioresistens SK82 0.41 MPMX26_00378 Formyltetrahydrofolate deformylase 0.52 MPMX26_02135 Glutamate 5-kinase low > 36
Acinetobacter baumannii LAC-4 0.41 RR41_RS16720 formyltetrahydrofolate deformylase 0.51 RR41_RS04980 glutamate 5-kinase — —
Mycobacterium tuberculosis H37Rv 0.40 Rv2964 Probable formyltetrahydrofolate deformylase PurU (formyl-FH(4) hydrolase) 0.31 Rv2439c Probable glutamate 5-kinase protein ProB (gamma-glutamyl kinase) (GK) — —
Rahnella sp. WP5 0.40 EX31_RS10115 formyltetrahydrofolate deformylase 0.39 EX31_RS20980 glutamate 5-kinase 0.85 32
Dickeya dadantii 3937 0.39 DDA3937_RS10325 formyltetrahydrofolate deformylase 0.36 DDA3937_RS16535 glutamate 5-kinase low > 74
Dickeya dianthicola ME23 0.39 DZA65_RS10810 formyltetrahydrofolate deformylase 0.36 DZA65_RS17695 glutamate 5-kinase 0.65 39
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF2756 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.39 GFF4114 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA low > 78
Erwinia tracheiphila HP pepo 2.2 0.39 IJEDHG_22670 purU formyltetrahydrofolate deformylase 0.38 IJEDHG_15490 proB Glutamate 5-kinase 0.66 47
Erwinia amylovora T8 0.39 OLJFJH_13275 formyltetrahydrofolate deformylase 0.38 OLJFJH_18410 Glutamate 5-kinase — —
Dickeya dianthicola 67-19 0.39 HGI48_RS10335 formyltetrahydrofolate deformylase 0.36 HGI48_RS16605 glutamate 5-kinase low > 71
Erwinia tracheiphila SCR3 0.39 LU632_RS12940 purU formyltetrahydrofolate deformylase 0.38 LU632_RS01185 proB glutamate 5-kinase low > 73
Klebsiella pneumoniae MKP103 0.39 KDGMDA_24520 formyltetrahydrofolate deformylase 0.39 KDGMDA_14005 Glutamate 5-kinase low > 95
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_02453 Formyltetrahydrofolate deformylase 0.40 OHPLBJKB_03398 Glutamate 5-kinase low > 74
Escherichia coli ECOR27 0.39 NOLOHH_20480 purU formyltetrahydrofolate deformylase 0.40 NOLOHH_02050 proB Glutamate 5-kinase low > 76
Escherichia coli ECRC102 0.39 NIAGMN_27665 purU formyltetrahydrofolate deformylase 0.40 NIAGMN_07535 proB Glutamate 5-kinase low > 80
Escherichia coli ECRC99 0.39 KEDOAH_25565 purU formyltetrahydrofolate deformylase 0.40 KEDOAH_18480 proB Glutamate 5-kinase — —
Escherichia coli ECRC101 0.39 MCAODC_21690 purU formyltetrahydrofolate deformylase 0.40 MCAODC_00195 proB Glutamate 5-kinase low > 87
Escherichia fergusonii Becca 0.39 EFB2_02694 Formyltetrahydrofolate deformylase 0.40 EFB2_03778 Glutamate 5-kinase low > 86
Escherichia coli ECRC98 0.39 JDDGAC_06005 purU formyltetrahydrofolate deformylase 0.40 JDDGAC_13300 proB Glutamate 5-kinase low > 87
Escherichia coli ECOR38 0.39 HEPCGN_25030 purU formyltetrahydrofolate deformylase 0.40 HEPCGN_07780 proB Glutamate 5-kinase 0.50 49
Escherichia coli Nissle 1917 0.39 ECOLIN_RS07460 formyltetrahydrofolate deformylase 0.40 ECOLIN_RS01825 glutamate 5-kinase low > 55
Escherichia coli ECRC100 0.39 OKFHMN_28570 purU formyltetrahydrofolate deformylase 0.40 OKFHMN_09675 proB Glutamate 5-kinase low > 79
Escherichia coli BL21 0.39 ECD_01208 formyltetrahydrofolate hydrolase 0.40 ECD_00239 gamma-glutamate kinase low > 61
Escherichia coli BW25113 0.38 b1232 purU formyltetrahydrofolate deformylase (NCBI) 0.40 b0242 proB gamma-glutamyl kinase (NCBI) 0.70 32
Enterobacter sp. TBS_079 0.38 MPMX20_02596 Formyltetrahydrofolate deformylase 0.39 MPMX20_00927 Glutamate 5-kinase 0.51 43
Pantoea sp. MT58 0.38 IAI47_09010 formyltetrahydrofolate deformylase 0.40 IAI47_15120 glutamate 5-kinase 0.77 54
Pantoea agglomerans CFBP13505 P0401 0.38 PagCFBP13505_RS02850 formyltetrahydrofolate deformylase 0.41 PagCFBP13505_RS10040 glutamate 5-kinase low > 74
Enterobacter asburiae PDN3 0.38 EX28DRAFT_0858 formyltetrahydrofolate deformylase 0.40 EX28DRAFT_2651 glutamate 5-kinase low > 76
Klebsiella michiganensis M5al 0.38 BWI76_RS17290 formyltetrahydrofolate deformylase 0.39 BWI76_RS05840 glutamate 5-kinase 0.45 10
Serratia liquefaciens MT49 0.38 IAI46_14265 formyltetrahydrofolate deformylase 0.38 IAI46_04430 glutamate 5-kinase low > 87
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_09940 formyltetrahydrofolate deformylase 0.37 CSW01_11575 glutamate 5-kinase low > 62
Pectobacterium carotovorum WPP14 0.38 HER17_RS11065 formyltetrahydrofolate deformylase 0.37 HER17_RS04700 glutamate 5-kinase low > 75
Escherichia coli ECRC62 0.38 BNILDI_18635 purU formyltetrahydrofolate deformylase 0.40 BNILDI_00245 proB Glutamate 5-kinase low > 75
Shewanella amazonensis SB2B 0.37 Sama_1134 purU formyltetrahydrofolate deformylase (RefSeq) 0.40 Sama_2516 gamma-glutamyl kinase (RefSeq) low > 62
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS21155 formyltetrahydrofolate deformylase 0.27 CA265_RS20855 glutamate 5-kinase (EC 2.7.2.11) (from data) low > 88
Shewanella sp. ANA-3 0.36 Shewana3_2821 purU formyltetrahydrofolate deformylase (RefSeq) 0.37 Shewana3_0954 gamma-glutamyl kinase (RefSeq) low > 73
Mucilaginibacter yixingensis YX-36 DSM 26809 0.36 ABZR88_RS14140 formyltetrahydrofolate deformylase 0.27 ABZR88_RS22170 glutamate 5-kinase low > 71
Shewanella oneidensis MR-1 0.36 SO1624 purU formyltetrahydrofolate deformylase (NCBI ptt file) 0.37 SO1121 proB glutamate 5-kinase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.34 Shew_2640 purU formyltetrahydrofolate deformylase (RefSeq) 0.40 Shew_2848 gamma-glutamyl kinase (RefSeq) 0.51 15

Not shown: 1 genomes with orthologs for Psyr_4018 only; 44 genomes with orthologs for Psyr_0704 only