Conservation of cofitness between Pf6N2E2_5594 and Pf6N2E2_5428 in Pseudomonas fluorescens FW300-N2E2

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_5594 Endonuclease III (EC 4.2.99.18) 1.0 Pf6N2E2_5428 DNA recombination and repair protein RecO 0.29 15
Pseudomonas fluorescens FW300-N2C3 0.99 AO356_18345 endonuclease III 0.97 AO356_17505 DNA repair protein RecO low > 104
Pseudomonas sp. RS175 0.98 PFR28_03349 Endonuclease III 0.96 PFR28_03521 DNA repair protein RecO low > 88
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_739 Endonuclease III (EC 4.2.99.18) 0.96 Pf1N1B4_890 DNA recombination and repair protein RecO low > 87
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1753 Endonuclease III (EC 4.2.99.18) 0.91 PfGW456L13_4838 DNA recombination and repair protein RecO low > 87
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_04085 endonuclease III 0.94 AO353_04500 DNA repair protein RecO low > 101
Pseudomonas fluorescens SBW25 0.95 PFLU_RS05740 endonuclease III 0.90 PFLU_RS05270 DNA repair protein RecO low > 109
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS05740 endonuclease III 0.90 PFLU_RS05270 DNA repair protein RecO 0.18 101
Pseudomonas simiae WCS417 0.95 PS417_05655 endonuclease III 0.91 PS417_05200 DNA recombination protein RecO low > 88
Pseudomonas putida KT2440 0.93 PP_1092 DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites 0.80 PP_1435 DNA repair protein RecO low > 96
Pseudomonas sp. S08-1 0.92 OH686_03910 endonuclease III 0.74 OH686_20090 DNA repair protein RecO low > 80
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_3888 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase 0.86 Psyr_3949 DNA replication and repair protein RecO low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_3888 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase 0.86 Psyr_3949 DNA replication and repair protein RecO low > 86
Pseudomonas stutzeri RCH2 0.89 Psest_3118 endonuclease III 0.72 Psest_3090 DNA repair protein RecO low > 67
Marinobacter adhaerens HP15 0.81 HP15_1285 endonuclease III 0.30 HP15_786 DNA repair protein RecO 0.28 22
Kangiella aquimarina DSM 16071 0.80 B158DRAFT_2365 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)/endonuclease III (EC 3.2.2.-) 0.24 B158DRAFT_2189 DNA replication and repair protein RecO low > 40
Escherichia coli ECRC102 0.75 NIAGMN_00540 nth endonuclease III 0.32 NIAGMN_19190 recO DNA repair protein RecO — —
Escherichia coli ECRC100 0.75 OKFHMN_27525 nth endonuclease III 0.32 OKFHMN_21420 recO DNA repair protein RecO low > 80
Escherichia coli ECRC101 0.75 MCAODC_17885 nth endonuclease III 0.32 MCAODC_11950 recO DNA repair protein RecO low > 87
Escherichia coli ECRC98 0.75 JDDGAC_02115 nth endonuclease III 0.32 JDDGAC_25085 recO DNA repair protein RecO low > 86
Escherichia coli ECRC99 0.75 KEDOAH_00580 nth endonuclease III 0.32 KEDOAH_06800 recO DNA repair protein RecO — —
Escherichia coli ECOR38 0.75 HEPCGN_05910 nth endonuclease III 0.32 HEPCGN_20565 recO DNA repair protein RecO low > 87
Escherichia coli ECOR27 0.75 NOLOHH_18045 nth endonuclease III 0.32 NOLOHH_13095 recO DNA repair protein RecO — —
Escherichia coli BW25113 0.75 b1633 nth DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) (NCBI) 0.32 b2565 recO DNA repair protein RecO (NCBI) low > 76
Escherichia coli Nissle 1917 0.75 ECOLIN_RS09110 endonuclease III 0.32 ECOLIN_RS14520 DNA repair protein RecO — —
Escherichia coli BL21 0.75 ECD_01603 DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) 0.32 ECD_02459 gap repair protein — —
Escherichia coli ECRC62 0.75 BNILDI_16835 nth endonuclease III 0.32 BNILDI_11895 recO DNA repair protein RecO low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_02093 Endonuclease III 0.32 OHPLBJKB_01142 DNA repair protein RecO low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3641 Endonuclease III (EC 4.2.99.18) 0.30 GFF2473 DNA recombination and repair protein RecO low > 78
Escherichia fergusonii Becca 0.75 EFB2_02359 Endonuclease III 0.32 EFB2_01331 DNA repair protein RecO low > 86
Klebsiella michiganensis M5al 0.74 BWI76_RS16385 endonuclease III 0.31 BWI76_RS21310 DNA repair protein RecO — —
Pantoea sp. MT58 0.74 IAI47_10475 endonuclease III 0.33 IAI47_04890 DNA repair protein RecO low > 76
Pectobacterium carotovorum WPP14 0.74 HER17_RS10860 endonuclease III 0.32 HER17_RS05825 DNA repair protein RecO low > 75
Enterobacter asburiae PDN3 0.74 EX28DRAFT_1629 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)/endonuclease III (EC 3.2.2.-) 0.31 EX28DRAFT_0081 DNA replication and repair protein RecO low > 76
Erwinia tracheiphila SCR3 0.74 LU632_RS11305 nth endonuclease III 0.31 LU632_RS15375 recO DNA repair protein RecO low > 74
Serratia liquefaciens MT49 0.74 IAI46_11455 endonuclease III 0.30 IAI46_19540 DNA repair protein RecO 0.36 82
Enterobacter sp. TBS_079 0.74 MPMX20_02005 Endonuclease III 0.27 MPMX20_03436 DNA repair protein RecO low > 85
Shewanella oneidensis MR-1 0.74 SO2514 nth endonuclease III (NCBI ptt file) 0.28 SO1350 recO DNA repair protein RecO (NCBI ptt file) 0.29 4
Shewanella amazonensis SB2B 0.73 Sama_1836 endonuclease III (RefSeq) 0.27 Sama_0882 DNA repair protein RecO (RefSeq) low > 62
Rahnella sp. WP5 0.73 EX31_RS06590 endonuclease III 0.31 EX31_RS21845 DNA repair protein RecO low > 89
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_05145 endonuclease III 0.30 CSW01_12445 DNA repair protein RecO low > 62
Acinetobacter radioresistens SK82 0.72 MPMX26_02306 Endonuclease III 0.28 MPMX26_02153 DNA repair protein RecO low > 36
Dickeya dianthicola ME23 0.72 DZA65_RS11025 endonuclease III 0.33 DZA65_RS16890 DNA repair protein RecO low > 75
Shewanella sp. ANA-3 0.72 Shewana3_2174 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (RefSeq) 0.28 Shewana3_3024 DNA repair protein RecO (RefSeq) low > 73
Rhodanobacter denitrificans FW104-10B01 0.72 LRK54_RS01850 endonuclease III 0.32 LRK54_RS16980 DNA repair protein RecO low > 59
Dickeya dianthicola 67-19 0.72 HGI48_RS10545 endonuclease III 0.33 HGI48_RS15810 DNA repair protein RecO low > 71
Rhodanobacter denitrificans MT42 0.72 LRK55_RS01640 endonuclease III 0.32 LRK55_RS16695 DNA repair protein RecO low > 63
Dechlorosoma suillum PS 0.71 Dsui_2985 endonuclease III 0.28 Dsui_2462 DNA repair protein RecO low > 51
Dickeya dadantii 3937 0.71 DDA3937_RS10545 endonuclease III 0.33 DDA3937_RS15725 DNA repair protein RecO low > 74
Dyella japonica UNC79MFTsu3.2 0.71 ABZR86_RS08185 endonuclease III 0.32 ABZR86_RS07140 DNA repair protein RecO low > 74
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_04675 nth endonuclease III 0.31 OKGIIK_07860 recO DNA repair protein RecO low > 52
Ralstonia solanacearum PSI07 0.70 RPSI07_RS19265 endonuclease III 0.33 RPSI07_RS18965 DNA repair protein RecO low > 81
Shewanella loihica PV-4 0.70 Shew_2072 endonuclease III (RefSeq) 0.30 Shew_1056 DNA repair protein RecO (RefSeq) low > 60
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.3350.1 Endonuclease III (EC 4.2.99.18) 0.25 Xcc-8004.3671.1 DNA recombination and repair protein RecO low > 74
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS09915 endonuclease III 0.32 ABZR87_RS10215 DNA repair protein RecO low > 80
Ralstonia solanacearum GMI1000 0.70 RS_RS04975 endonuclease III 0.33 RS_RS05275 DNA repair protein RecO low > 80
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS14195 endonuclease III 0.32 RALBFv3_RS14495 DNA repair protein RecO low > 76
Ralstonia solanacearum UW163 0.70 UW163_RS11660 endonuclease III 0.32 UW163_RS11960 DNA repair protein RecO — —
Variovorax sp. SCN45 0.69 GFF418 Endonuclease III (EC 4.2.99.18) 0.13 GFF3872 DNA recombination and repair protein RecO low > 127
Acidovorax sp. GW101-3H11 0.68 Ac3H11_1010 Endonuclease III (EC 4.2.99.18) 0.13 Ac3H11_1564 DNA recombination and repair protein RecO 0.53 11
Variovorax sp. OAS795 0.67 ABID97_RS17315 endonuclease III 0.11 ABID97_RS08375 DNA repair protein RecO low > 91
Lysobacter sp. OAE881 0.67 ABIE51_RS07560 endonuclease III 0.25 ABIE51_RS13850 DNA repair protein RecO low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF4003 Endonuclease III (EC 4.2.99.18) 0.16 GFF3348 DNA recombination and repair protein RecO low > 90
Alteromonas macleodii MIT1002 0.32 MIT1002_01251 Endonuclease III 0.28 MIT1002_00790 Recombination protein O low > 70

Not shown: 32 genomes with orthologs for Pf6N2E2_5594 only; 0 genomes with orthologs for Pf6N2E2_5428 only