Conservation of cofitness between Pf6N2E2_4580 and Pf6N2E2_5128 in Pseudomonas fluorescens FW300-N2E2

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_4580 FIG015287: Zinc protease 1.0 Pf6N2E2_5128 COG1496: Uncharacterized conserved protein 0.32 11
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_13325 peptidase M16 0.96 AO356_15930 laccase low > 104
Pseudomonas sp. RS175 0.92 PFR28_04261 hypothetical protein 0.89 PFR28_03747 Polyphenol oxidase low > 88
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_08260 peptidase M16 0.83 AO353_14225 laccase 0.29 95
Pseudomonas sp. DMC3 0.87 GFF228 hypothetical protein 0.81 GFF4005 Polyphenol oxidase 0.47 60
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_991 FIG015287: Zinc protease 0.84 PfGW456L13_1494 COG1496: Uncharacterized conserved protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_2321 FIG015287: Zinc protease 0.86 Pf1N1B4_2823 COG1496: Uncharacterized conserved protein — —
Pseudomonas sp. SVBP6 0.81 COO64_RS12900 pitrilysin family protein 0.76 COO64_RS11060 pgeF peptidoglycan editing factor PgeF low > 93
Pseudomonas lactucae CFBP13502 0.81 GEMAOFIL_05501 hypothetical protein 0.80 GEMAOFIL_00970 Polyphenol oxidase low > 93
Pseudomonas fluorescens SBW25 0.80 PFLU_RS28465 insulinase family protein 0.82 PFLU_RS03875 peptidoglycan editing factor PgeF low > 109
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS28465 insulinase family protein 0.82 PFLU_RS03875 peptidoglycan editing factor PgeF low > 109
Pseudomonas simiae WCS417 0.79 PS417_26820 peptidase M16 0.84 PS417_03825 laccase low > 88
Pseudomonas sp. BP01 0.75 JOY50_RS20815 pitrilysin family protein 0.77 JOY50_RS27135 pgeF peptidoglycan editing factor PgeF low > 84
Pseudomonas putida KT2440 0.74 PP_5113 predicted Zn-dependent peptidases 0.76 PP_0624 Uncharacterized protein YfiH low > 96
Pseudomonas sp. S08-1 0.74 OH686_14225 Zinc protease 0.75 OH686_16415 Multicopper polyphenol oxidase low > 80
Pseudomonas aeruginosa PA14 0.73 IKLFDK_23570 peptidase M16 0.74 IKLFDK_00815 peptidoglycan editing factor PgeF low > 100
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_4753 Insulinase-like:Peptidase M16, C-terminal 0.76 Psyr_0727 Protein of unknown function DUF152 low > 86
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_4753 Insulinase-like:Peptidase M16, C-terminal 0.76 Psyr_0727 Protein of unknown function DUF152 low > 86
Pseudomonas stutzeri RCH2 0.68 Psest_0256 Predicted Zn-dependent peptidases 0.71 Psest_0710 uncharacterized protein, YfiH family — —
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS20700 zinc protease 0.50 HSERO_RS15065 laccase low > 78
Dechlorosoma suillum PS 0.29 Dsui_1026 putative Zn-dependent peptidase 0.57 Dsui_2531 uncharacterized protein, YfiH family low > 51
Methylophilus sp. DMC18 0.28 GFF763 hypothetical protein 0.53 GFF1214 Polyphenol oxidase 0.61 11
Acinetobacter radioresistens SK82 0.28 MPMX26_01631 hypothetical protein 0.31 MPMX26_00736 Polyphenol oxidase — —
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS01985 zinc protease 0.53 RR42_RS07595 hypothetical protein low > 128
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS11065 insulinase family protein 0.43 RALBFv3_RS01515 peptidoglycan editing factor PgeF low > 76
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS06955 pitrilysin family protein 0.46 ABZR87_RS13310 peptidoglycan editing factor PgeF low > 80
Ralstonia solanacearum PSI07 0.26 RPSI07_RS22235 insulinase family protein 0.43 RPSI07_RS15975 peptidoglycan editing factor PgeF low > 81
Ralstonia solanacearum UW163 0.26 UW163_RS02515 insulinase family protein 0.43 UW163_RS14825 peptidoglycan editing factor PgeF — —
Ralstonia solanacearum GMI1000 0.26 RS_RS01915 insulinase family protein 0.46 RS_RS08210 peptidoglycan editing factor PgeF low > 80
Variovorax sp. SCN45 0.26 GFF2317 FIG015287: Zinc protease 0.53 GFF807 FIG00003370: Multicopper polyphenol oxidase low > 127
Variovorax sp. OAS795 0.26 ABID97_RS23880 pitrilysin family protein 0.49 ABID97_RS12405 peptidoglycan editing factor PgeF low > 91
Acidovorax sp. GW101-3H11 0.24 Ac3H11_3874 FIG015287: Zinc protease 0.44 Ac3H11_2305 COG1496: Uncharacterized conserved protein 0.39 16
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF816 FIG015287: Zinc protease 0.44 GFF4798 COG1496: Uncharacterized conserved protein — —
Phaeobacter inhibens DSM 17395 0.20 PGA1_c32810 peptidase, M16 family 0.26 PGA1_c24750 uncharacterized protein, YfiH family low > 62
Shewanella amazonensis SB2B 0.18 Sama_3443 peptidase M16-like protein (RefSeq) 0.48 Sama_2604 hypothetical protein (RefSeq) low > 62
Azospirillum sp. SherDot2 0.18 MPMX19_00521 hypothetical protein 0.26 MPMX19_01826 Polyphenol oxidase low > 112
Xanthobacter sp. DMC5 0.18 GFF3990 hypothetical protein 0.27 GFF1931 Polyphenol oxidase — —
Magnetospirillum magneticum AMB-1 0.18 AMB_RS04275 insulinase family protein 0.27 AMB_RS03060 peptidoglycan editing factor PgeF low > 64
Azospirillum brasilense Sp245 0.17 AZOBR_RS05055 zinc protease 0.25 AZOBR_RS31175 polyphenol oxidase low > 97
Rhodopseudomonas palustris CGA009 0.17 TX73_022670 pitrilysin family protein 0.30 TX73_022600 peptidoglycan editing factor PgeF 0.29 81
Bosea sp. OAE506 0.17 ABIE41_RS23240 pitrilysin family protein 0.28 ABIE41_RS11450 peptidoglycan editing factor PgeF low > 77
Rhodospirillum rubrum S1H 0.17 Rru_A2973 Peptidase M16-like (NCBI) 0.25 Rru_A0643 Protein of unknown function DUF152 (NCBI) low > 58
Shewanella sp. ANA-3 0.17 Shewana3_3939 DNA-directed RNA polymerase (RefSeq) 0.53 Shewana3_3170 hypothetical protein (RefSeq) low > 73
Shewanella loihica PV-4 0.16 Shew_3580 peptidase M16 domain-containing protein (RefSeq) 0.49 Shew_2949 hypothetical protein (RefSeq) low > 60
Dinoroseobacter shibae DFL-12 0.16 Dshi_0362 peptidase M16 domain protein (RefSeq) 0.27 Dshi_2651 protein of unknown function DUF152 (RefSeq) low > 64
Rhodanobacter sp. FW510-T8 0.14 OKGIIK_14300 Multidrug transporter 0.43 OKGIIK_01795 pgeF peptidoglycan editing factor PgeF low > 52
Rhodanobacter sp000427505 FW510-R12 0.13 LRK53_RS00715 insulinase family protein 0.48 LRK53_RS05050 peptidoglycan editing factor PgeF — —
Rhodanobacter denitrificans FW104-10B01 0.13 LRK54_RS07800 insulinase family protein 0.45 LRK54_RS04960 peptidoglycan editing factor PgeF low > 59
Rhodanobacter denitrificans MT42 0.13 LRK55_RS07530 pitrilysin family protein 0.45 LRK55_RS04740 peptidoglycan editing factor PgeF low > 63
Phocaeicola vulgatus CL09T03C04 0.09 HMPREF1058_RS03885 insulinase family protein 0.22 HMPREF1058_RS00725 peptidoglycan editing factor PgeF low > 67
Phocaeicola dorei CL03T12C01 0.09 ABI39_RS17340 insulinase family protein 0.21 ABI39_RS08330 peptidoglycan editing factor PgeF low > 72
Bacteroides thetaiotaomicron VPI-5482 0.09 BT0746 putative zinc protease (NCBI ptt file) 0.20 BT4389 conserved hypothetical protein (NCBI ptt file) low > 81

Not shown: 3 genomes with orthologs for Pf6N2E2_4580 only; 57 genomes with orthologs for Pf6N2E2_5128 only