Conservation of cofitness between Pf6N2E2_5045 and Pf6N2E2_4364 in Pseudomonas fluorescens FW300-N2E2

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_5045 Permease of the drug/metabolite transporter (DMT) superfamily 1.0 Pf6N2E2_4364 Protein YicC 0.28 20
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_15525 hypothetical protein 0.98 AO356_12495 hypothetical protein low > 104
Pseudomonas sp. RS175 0.97 PFR28_03826 putative inner membrane transporter YedA 0.98 PFR28_04421 hypothetical protein — —
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_2735 Permease of the drug/metabolite transporter (DMT) superfamily 0.94 Pf1N1B4_2116 Protein YicC — —
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_1408 Permease of the drug/metabolite transporter (DMT) superfamily 0.96 PfGW456L13_783 Protein YicC low > 87
Pseudomonas simiae WCS417 0.84 PS417_24505 membrane protein 0.94 PS417_27815 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_06270 hypothetical protein 0.95 AO353_09265 hypothetical protein low > 101
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS26430 drug/metabolite exporter YedA 0.93 PFLU_RS29495 YicC family protein low > 109
Pseudomonas fluorescens SBW25 0.84 PFLU_RS26430 drug/metabolite exporter YedA 0.93 PFLU_RS29495 YicC family protein low > 109
Pseudomonas putida KT2440 0.72 PP_4767 amino acid exporter for phenylalanine, threonine 0.86 PP_5295 conserved protein of unknown function low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_4298 Protein of unknown function DUF6 0.88 Psyr_0212 Conserved hypothetical protein 255 low > 86
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_4298 Protein of unknown function DUF6 0.88 Psyr_0212 Conserved hypothetical protein 255 low > 86
Rahnella sp. WP5 0.56 EX31_RS23955 drug/metabolite exporter YedA 0.45 EX31_RS14510 YicC family protein low > 89
Serratia liquefaciens MT49 0.53 IAI46_07395 drug/metabolite exporter YedA 0.45 IAI46_24855 YicC family protein low > 86
Klebsiella michiganensis M5al 0.49 BWI76_RS18410 drug/metabolite exporter YedA 0.46 BWI76_RS27395 hypothetical protein low > 92
Escherichia coli ECRC62 0.49 BNILDI_15030 yedA drug/metabolite exporter YedA 0.44 BNILDI_04050 yicC UPF0701 protein YicC low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF3998 Permease of the drug/metabolite transporter (DMT) superfamily 0.44 GFF365 Protein YicC low > 78
Escherichia coli ECOR38 0.48 HEPCGN_03970 yedA drug/metabolite exporter YedA 0.44 HEPCGN_14405 yicC UPF0701 protein YicC 0.55 82
Escherichia coli ECRC101 0.46 MCAODC_19785 yedA drug/metabolite exporter YedA 0.44 MCAODC_06095 yicC UPF0701 protein YicC low > 87
Escherichia coli ECRC98 0.46 JDDGAC_00195 yedA drug/metabolite exporter YedA 0.44 JDDGAC_19210 yicC UPF0701 protein YicC low > 86
Escherichia coli BW25113 0.46 b1959 yedA predicted inner membrane protein (NCBI) 0.44 b3644 yicC hypothetical protein (NCBI) low > 76
Escherichia fergusonii Becca 0.46 EFB2_01988 putative inner membrane transporter YedA 0.44 EFB2_00169 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_01769 putative inner membrane transporter YedA 0.44 OHPLBJKB_00058 hypothetical protein low > 73
Escherichia coli Nissle 1917 0.46 ECOLIN_RS11140 drug/metabolite exporter YedA 0.44 ECOLIN_RS20760 YicC/YloC family endoribonuclease low > 55
Escherichia coli ECRC99 0.46 KEDOAH_02485 yedA drug/metabolite exporter YedA 0.44 KEDOAH_12560 yicC UPF0701 protein YicC — —
Escherichia coli ECOR27 0.46 NOLOHH_16240 yedA drug/metabolite exporter YedA 0.44 NOLOHH_07465 yicC UPF0701 protein YicC low > 75
Escherichia coli ECRC102 0.46 NIAGMN_02445 yedA drug/metabolite exporter YedA 0.44 NIAGMN_13345 yicC UPF0701 protein YicC — —
Escherichia coli ECRC100 0.46 OKFHMN_25610 yedA drug/metabolite exporter YedA 0.44 OKFHMN_15585 yicC UPF0701 protein YicC low > 80
Enterobacter sp. TBS_079 0.45 MPMX20_02955 putative inner membrane transporter YedA 0.45 MPMX20_00091 hypothetical protein low > 85
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS11675 drug/metabolite exporter YedA 0.41 ABZR86_RS11895 YicC/YloC family endoribonuclease low > 74
Enterobacter asburiae PDN3 0.44 EX28DRAFT_0595 Predicted permease, DMT superfamily 0.43 EX28DRAFT_3894 TIGR00255 family protein low > 76
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_11930 yedA drug/metabolite exporter YedA 0.40 OKGIIK_12145 yicC YicC-like family, N-terminal region — —
Rhodanobacter denitrificans MT42 0.39 LRK55_RS11680 drug/metabolite exporter YedA 0.41 LRK55_RS11475 YicC family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS11955 drug/metabolite exporter YedA 0.41 LRK54_RS11750 YicC family protein low > 59
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.4970.1 Permease of the drug/metabolite transporter (DMT) superfamily 0.39 Xcc-8004.1220.1 Protein YicC low > 74
Lysobacter sp. OAE881 0.37 ABIE51_RS03200 drug/metabolite exporter YedA 0.43 ABIE51_RS17280 YicC/YloC family endoribonuclease low > 62
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS31400 GntR family transcriptional regulator 0.33 RR42_RS04905 hypothetical protein — —
Variovorax sp. OAS795 0.31 ABID97_RS13970 drug/metabolite exporter YedA 0.28 ABID97_RS23655 YicC/YloC family endoribonuclease low > 91
Ralstonia solanacearum GMI1000 0.30 RS_RS21045 GntR family transcriptional regulator 0.31 RS_RS10815 YicC family protein — —
Variovorax sp. SCN45 0.30 GFF940 Permease of the drug/metabolite transporter (DMT) superfamily 0.28 GFF2378 UPF0701 protein YicC — —
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS20410 EamA family transporter 0.31 ABZR87_RS15240 YicC/YloC family endoribonuclease low > 80
Ralstonia solanacearum PSI07 0.28 RPSI07_RS03405 GntR family transcriptional regulator 0.31 RPSI07_RS13855 YicC family protein low > 81
Ralstonia solanacearum UW163 0.27 UW163_RS19390 GntR family transcriptional regulator 0.32 UW163_RS10390 YicC family protein — —
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS19785 GntR family transcriptional regulator 0.32 RALBFv3_RS03330 YicC family protein low > 76
Acidovorax sp. GW101-3H11 0.27 Ac3H11_4554 Permease of the drug/metabolite transporter (DMT) superfamily 0.26 Ac3H11_3667 Protein YicC — —
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS10765 EamA family transporter 0.20 CA265_RS18780 YicC family protein low > 88
Hydrogenophaga sp. GW460-11-11-14-LB1 0.25 GFF134 Permease of the drug/metabolite transporter (DMT) superfamily 0.28 GFF3251 Protein YicC — —
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS05485 EamA family transporter 0.34 QEN71_RS03650 YicC/YloC family endoribonuclease low > 153
Paraburkholderia graminis OAS925 0.23 ABIE53_002851 drug/metabolite transporter (DMT)-like permease 0.34 ABIE53_003233 uncharacterized protein (TIGR00255 family) low > 113
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS13190 membrane protein 0.34 BPHYT_RS15320 hypothetical protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.23 H281DRAFT_00402 Permease of the drug/metabolite transporter (DMT) superfamily 0.34 H281DRAFT_04007 TIGR00255 family protein low > 103
Bacteroides thetaiotaomicron VPI-5482 0.22 BT1397 putative membrane protein (NCBI ptt file) 0.18 BT_2008 hypothetical protein (RefSeq) low > 81
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS19240 EamA family transporter 0.20 ABI39_RS08135 YicC family protein low > 72
Rhizobium sp. OAE497 0.18 ABIE40_RS30600 EamA family transporter 0.26 ABIE40_RS06380 YicC/YloC family endoribonuclease low > 107
Pseudomonas sp. S08-1 0.17 OH686_04575 hypothetical protein 0.81 OH686_13565 UPF0701 protein YicC low > 80
Dechlorosoma suillum PS 0.11 Dsui_1370 putative permease, DMT superfamily 0.40 Dsui_0497 TIGR00255 family protein low > 51
Phaeobacter inhibens DSM 17395 0.10 PGA1_c06570 putative integral membrane protein 0.29 PGA1_c15840 TIGR00255 family protein low > 62
Shewanella loihica PV-4 0.09 Shew_3337 hypothetical protein (RefSeq) 0.48 Shew_3489 hypothetical protein (RefSeq) low > 60

Not shown: 1 genomes with orthologs for Pf6N2E2_5045 only; 39 genomes with orthologs for Pf6N2E2_4364 only