Conservation of cofitness between Pf1N1B4_2728 and Pf1N1B4_2208 in Pseudomonas fluorescens FW300-N1B4

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_2728 ATP-dependent helicase HrpB 1.0 Pf1N1B4_2208 Polyphosphate kinase (EC 2.7.4.1) 0.26 10
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_1395 ATP-dependent helicase HrpB 0.94 PfGW456L13_874 Polyphosphate kinase (EC 2.7.4.1) low > 87
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_5038 ATP-dependent helicase HrpB 0.97 Pf6N2E2_4453 Polyphosphate kinase (EC 2.7.4.1) low > 103
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_15485 ATP-dependent helicase 0.94 AO356_12895 polyphosphate kinase low > 104
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_06300 ATP-dependent helicase 0.95 AO353_08885 polyphosphate kinase low > 101
Pseudomonas sp. RS175 0.91 PFR28_03833 ATP-dependent RNA helicase HrpB 0.95 PFR28_04345 Polyphosphate kinase low > 88
Pseudomonas simiae WCS417 0.89 PS417_24550 ATP-dependent helicase 0.94 PS417_27435 polyphosphate kinase low > 88
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS26480 ATP-dependent helicase HrpB 0.94 PFLU_RS29095 polyphosphate kinase 1 low > 109
Pseudomonas fluorescens SBW25 0.88 PFLU_RS26480 ATP-dependent helicase HrpB 0.94 PFLU_RS29095 polyphosphate kinase 1 low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_4320 ATP-dependent helicase HrpB 0.93 Psyr_0293 Polyphosphate kinase low > 86
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_4320 ATP-dependent helicase HrpB 0.93 Psyr_0293 Polyphosphate kinase 0.24 56
Pseudomonas putida KT2440 0.80 PP_4772 ATP-dependent helicase HrpB 0.89 PP_5217 Polyphosphate kinase low > 96
Pseudomonas stutzeri RCH2 0.79 Psest_0629 ATP-dependent helicase HrpB 0.85 Psest_3732 polyphosphate kinase 1 low > 67
Pseudomonas sp. S08-1 0.79 OH686_08800 ATP-dependent helicase HrpB 0.84 OH686_13995 polyphosphate kinase 1 low > 80
Magnetospirillum magneticum AMB-1 0.46 AMB_RS06395 ATP-dependent helicase HrpB 0.33 AMB_RS14295 RNA degradosome polyphosphate kinase — —
Azospirillum sp. SherDot2 0.45 MPMX19_00095 ATP-dependent RNA helicase HrpB 0.32 MPMX19_01149 Polyphosphate kinase low > 112
Marinobacter adhaerens HP15 0.43 HP15_3782 RNA helicase, ATP-dependent DEAH box, HrpB type 0.57 HP15_3334 polyphosphate kinase low > 73
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_3452 ATP-dependent helicase HrpB 0.29 Echvi_2996 polyphosphate kinase 1 low > 79
Rhodopseudomonas palustris CGA009 0.40 TX73_002770 ATP-dependent helicase HrpB 0.32 TX73_015770 RNA degradosome polyphosphate kinase low > 86
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_03600 ATP-dependent helicase HrpB 0.28 CA264_11200 RNA degradosome polyphosphate kinase low > 74
Enterobacter asburiae PDN3 0.39 EX28DRAFT_3737 ATP-dependent helicase HrpB 0.25 EX28DRAFT_0166 polyphosphate kinase 1 0.50 6
Bosea sp. OAE506 0.39 ABIE41_RS03925 ATP-dependent helicase HrpB 0.33 ABIE41_RS16125 RNA degradosome polyphosphate kinase low > 77
Caulobacter crescentus NA1000 0.38 CCNA_01243 ATP-dependent helicase hrpB 0.33 CCNA_01782 polyphosphate kinase 1 low > 66
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_01243 ATP-dependent helicase hrpB 0.33 CCNA_01782 polyphosphate kinase 1 low > 67
Rhodospirillum rubrum S1H 0.38 Rru_A2365 ATP-dependent helicase HrpB (NCBI) 0.35 Rru_A2161 Polyphosphate kinase (NCBI) low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF84 ATP-dependent helicase HrpB 0.26 GFF2167 Polyphosphate kinase (EC 2.7.4.1) low > 78
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.354.1 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. 0.47 Xcc-8004.4064.1 Polyphosphate kinase (EC 2.7.4.1) low > 74
Enterobacter sp. TBS_079 0.38 MPMX20_00834 ATP-dependent RNA helicase HrpB 0.26 MPMX20_03356 Polyphosphate kinase low > 85
Klebsiella michiganensis M5al 0.38 BWI76_RS05030 ATP-dependent helicase 0.26 BWI76_RS20995 RNA degradosome polyphosphate kinase low > 92
Shewanella sp. ANA-3 0.37 Shewana3_0622 ATP-dependent helicase HrpB (RefSeq) 0.24 Shewana3_2417 polyphosphate kinase (RefSeq) low > 73
Escherichia fergusonii Becca 0.37 EFB2_03896 ATP-dependent RNA helicase HrpB 0.26 EFB2_01397 Polyphosphate kinase low > 86
Escherichia coli Nissle 1917 0.37 ECOLIN_RS00830 ATP-dependent helicase HrpB 0.26 ECOLIN_RS14200 polyphosphate kinase 1 low > 55
Escherichia coli ECRC100 0.37 OKFHMN_10330 hrpB ATP-dependent helicase HrpB 0.26 OKFHMN_21800 ppk1 polyphosphate kinase 1 low > 80
Escherichia coli ECRC102 0.37 NIAGMN_08180 hrpB ATP-dependent helicase HrpB 0.26 NIAGMN_19570 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECRC99 0.37 KEDOAH_17825 hrpB ATP-dependent helicase HrpB 0.26 KEDOAH_06420 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECRC101 0.37 MCAODC_00845 hrpB ATP-dependent helicase HrpB 0.26 MCAODC_12330 ppk1 polyphosphate kinase 1 low > 87
Escherichia coli ECOR38 0.37 HEPCGN_08280 hrpB ATP-dependent helicase HrpB 0.26 HEPCGN_20965 ppk1 polyphosphate kinase 1 low > 87
Escherichia coli BW25113 0.37 b0148 hrpB helicase, ATP-dependent (VIMSS) 0.26 b2501 ppk polyphosphate kinase (NCBI) low > 76
Escherichia coli ECRC98 0.37 JDDGAC_13925 hrpB ATP-dependent helicase HrpB 0.26 JDDGAC_25745 ppk1 polyphosphate kinase 1 low > 86
Escherichia coli ECRC62 0.37 BNILDI_08995 hrpB ATP-dependent helicase HrpB 0.26 BNILDI_12260 ppk1 polyphosphate kinase 1 low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_03514 hypothetical protein 0.26 OHPLBJKB_01225 Polyphosphate kinase low > 73
Escherichia coli BL21 0.37 ECD_00147 putative ATP-dependent helicase 0.26 ECD_02393 polyphosphate kinase, component of RNA degradosome low > 61
Agrobacterium fabrum C58 0.37 Atu0052 helicase 0.31 Atu1144 polyphosphate kinase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS05425 ATP-dependent helicase HrpB 0.32 A4249_RS08195 RNA degradosome polyphosphate kinase — —
Escherichia coli ECOR27 0.37 NOLOHH_02675 hrpB ATP-dependent helicase HrpB 0.26 NOLOHH_13450 ppk1 polyphosphate kinase 1 low > 75
Lysobacter sp. OAE881 0.37 ABIE51_RS00675 ATP-dependent helicase HrpB 0.48 ABIE51_RS14230 polyphosphate kinase 1 low > 62
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_16270 hrpA HrpA-like RNA helicase 0.67 OKGIIK_08995 ppk1 RNA degradosome polyphosphate kinase low > 52
Rhodanobacter denitrificans MT42 0.37 LRK55_RS09655 ATP-dependent helicase HrpB 0.67 LRK55_RS15755 polyphosphate kinase 1 low > 63
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS10015 ATP-dependent helicase HrpB 0.68 LRK54_RS16000 polyphosphate kinase 1 low > 59
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS13060 ATP-dependent helicase HrpB 0.68 ABZR86_RS07490 polyphosphate kinase 1 0.69 4
Dinoroseobacter shibae DFL-12 0.36 Dshi_2580 ATP-dependent helicase HrpB (RefSeq) 0.33 Dshi_0740 Polyphosphate kinase (RefSeq) low > 64
Serratia liquefaciens MT49 0.36 IAI46_21195 ATP-dependent helicase HrpB 0.26 IAI46_18915 polyphosphate kinase 1 low > 86
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_03170 ATP-dependent helicase HrpB 0.25 CSW01_03780 polyphosphate kinase 1 low > 62
Sinorhizobium meliloti 1021 0.36 SMc02586 ATP-dependent helicase 0.32 SMc00618 polyphosphate kinase 0.43 81
Rahnella sp. WP5 0.36 EX31_RS03235 ATP-dependent helicase HrpB 0.26 EX31_RS22680 polyphosphate kinase 1 low > 89
Shewanella loihica PV-4 0.36 Shew_3124 ATP-dependent helicase HrpB (RefSeq) 0.24 Shew_3079 polyphosphate kinase (RefSeq) low > 60
Rhizobium sp. OAE497 0.36 ABIE40_RS19515 ATP-dependent helicase HrpB 0.31 ABIE40_RS06575 RNA degradosome polyphosphate kinase low > 107
Shewanella amazonensis SB2B 0.34 Sama_2972 ATP-dependent helicase HrpB (RefSeq) 0.24 Sama_2011 polyphosphate kinase (RefSeq) low > 62
Pantoea sp. MT58 0.34 IAI47_15620 ATP-dependent helicase HrpB 0.25 IAI47_05155 polyphosphate kinase 1 low > 76
Dickeya dianthicola 67-19 0.33 HGI48_RS16035 ATP-dependent helicase HrpB 0.26 HGI48_RS15225 polyphosphate kinase 1 low > 71
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_2125 ATP-dependent helicase HrpB 0.32 Ga0059261_0225 polyphosphate kinase 1 low > 68
Pectobacterium carotovorum WPP14 0.33 HER17_RS05595 ATP-dependent helicase HrpB 0.26 HER17_RS06425 polyphosphate kinase 1 low > 75
Dickeya dadantii 3937 0.32 DDA3937_RS15920 ATP-dependent helicase HrpB 0.26 DDA3937_RS15150 polyphosphate kinase 1 low > 74
Dickeya dianthicola ME23 0.32 DZA65_RS17120 ATP-dependent helicase HrpB 0.26 DZA65_RS16045 polyphosphate kinase 1 low > 75
Alteromonas macleodii MIT1002 0.28 MIT1002_00406 ATP-dependent RNA helicase HrpB 0.25 MIT1002_00872 Polyphosphate kinase low > 70

Not shown: 4 genomes with orthologs for Pf1N1B4_2728 only; 32 genomes with orthologs for Pf1N1B4_2208 only