Conservation of cofitness between Pf1N1B4_3500 and Pf1N1B4_1096 in Pseudomonas fluorescens FW300-N1B4

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_3500 D-lactate dehydrogenase (EC 1.1.1.28) 1.0 Pf1N1B4_1096 Septum formation protein Maf 0.25 10
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_02740 hydroxyacid dehydrogenase 0.77 AO353_05235 septum formation protein Maf low > 101
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_2028 D-lactate dehydrogenase (EC 1.1.1.28) 0.83 PfGW456L13_5030 Septum formation protein Maf low > 87
Pseudomonas simiae WCS417 0.88 PS417_16375 2-hydroxyacid dehydrogenase 0.73 PS417_04265 septum formation protein Maf low > 88
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS18415 2-hydroxyacid dehydrogenase 0.72 PFLU_RS04320 septum formation inhibitor Maf low > 109
Pseudomonas fluorescens SBW25 0.87 PFLU_RS18415 2-hydroxyacid dehydrogenase 0.72 PFLU_RS04320 septum formation inhibitor Maf 0.43 84
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_19040 hydroxyacid dehydrogenase 0.72 AO356_07115 septum formation protein Maf low > 104
Pseudomonas sp. RS175 0.86 PFR28_03228 D-lactate dehydrogenase 0.78 PFR28_00157 dTTP/UTP pyrophosphatase low > 88
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_5719 D-lactate dehydrogenase (EC 1.1.1.28) 0.80 Pf6N2E2_3284 Septum formation protein Maf low > 103
Pseudomonas putida KT2440 0.82 PP_1649 D-lactate dehydrogenase 0.66 PP_0936 septum formation protein low > 96
Pseudomonas stutzeri RCH2 0.74 Psest_4064 Lactate dehydrogenase and related dehydrogenases 0.59 Psest_3324 MAF protein low > 67
Pseudomonas sp. S08-1 0.70 OH686_18940 D-lactate dehydrogenase 0.56 OH686_08600 septum formation protein Maf low > 80
Ralstonia solanacearum UW163 0.69 UW163_RS05795 2-hydroxyacid dehydrogenase 0.36 UW163_RS10100 septum formation inhibitor Maf — —
Ralstonia solanacearum IBSBF1503 0.69 RALBFv3_RS07830 2-hydroxyacid dehydrogenase 0.36 RALBFv3_RS03570 septum formation inhibitor Maf low > 76
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_04746 D-lactate dehydrogenase 0.39 H281DRAFT_04516 septum formation protein low > 103
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS03835 D-lactate dehydrogenase 0.35 BPHYT_RS06380 septum formation protein Maf low > 109
Ralstonia solanacearum GMI1000 0.66 RS_RS15730 2-hydroxyacid dehydrogenase 0.34 RS_RS11020 septum formation inhibitor Maf low > 80
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS03505 2-hydroxyacid dehydrogenase 0.36 ABZR87_RS15435 Maf family protein low > 80
Ralstonia solanacearum PSI07 0.65 RPSI07_RS09445 2-hydroxyacid dehydrogenase 0.36 RPSI07_RS13655 septum formation inhibitor Maf low > 81
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS26130 2-hydroxyacid dehydrogenase 0.37 QEN71_RS24425 Maf family protein low > 153
Agrobacterium fabrum C58 0.58 Atu3870 D-lactate dehydrogenase 0.33 Atu0533 putative inhibitor of septum formation low > 89
Shewanella sp. ANA-3 0.57 Shewana3_3319 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) 0.44 Shewana3_3645 maf protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.55 SO0968 ldhA D-lactate dehydrogenase (NCBI ptt file) 0.44 SO4095 maf maf protein (NCBI ptt file) low > 76
Synechococcus elongatus PCC 7942 0.55 Synpcc7942_1347 ldhA 2-hydroxyacid dehydrogenase-like 0.21 Synpcc7942_0209 maf Maf-like protein low > 38
Shewanella amazonensis SB2B 0.54 Sama_0612 D-lactate dehydrogenase (RefSeq) 0.47 Sama_0470 maf protein (RefSeq) low > 62
Pontibacter actiniarum KMM 6156, DSM 19842 0.53 CA264_08545 2-hydroxyacid dehydrogenase 0.24 CA264_05595 septum formation protein Maf low > 74
Shewanella loihica PV-4 0.53 Shew_0787 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) 0.44 Shew_0406 maf protein (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_14945 2-hydroxyacid dehydrogenase 0.41 CSW01_02200 septum formation inhibitor Maf low > 62
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS12550 D-lactate dehydrogenase 0.40 HSERO_RS17785 septum formation inhibitor Maf low > 78
Pantoea sp. MT58 0.52 IAI47_09495 2-hydroxyacid dehydrogenase 0.47 IAI47_02450 septum formation inhibitor Maf low > 76
Escherichia coli ECOR38 0.52 HEPCGN_26050 ldhA D-lactate dehydrogenase 0.46 HEPCGN_16605 yhdE nucleoside triphosphate pyrophosphatase YhdE low > 87
Escherichia coli ECOR27 0.52 NOLOHH_19530 ldhA D-lactate dehydrogenase 0.46 NOLOHH_09525 yhdE nucleoside triphosphate pyrophosphatase YhdE low > 75
Escherichia coli BW25113 0.52 b1380 ldhA D-lactate dehydrogenase (NCBI) 0.45 b3248 yhdE Maf-like protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_02331 D-lactate dehydrogenase 0.45 OHPLBJKB_00457 Maf-like protein YhdE low > 73
Escherichia coli ECRC99 0.52 KEDOAH_26640 ldhA D-lactate dehydrogenase 0.45 KEDOAH_10410 yhdE nucleoside triphosphate pyrophosphatase YhdE — —
Escherichia coli ECRC98 0.52 JDDGAC_04285 ldhA D-lactate dehydrogenase 0.45 JDDGAC_21365 yhdE nucleoside triphosphate pyrophosphatase YhdE low > 86
Escherichia coli Nissle 1917 0.52 ECOLIN_RS08110 D-lactate dehydrogenase 0.45 ECOLIN_RS18610 nucleoside triphosphate pyrophosphatase YhdE low > 55
Escherichia coli ECRC100 0.52 OKFHMN_01795 ldhA D-lactate dehydrogenase 0.45 OKFHMN_17740 yhdE nucleoside triphosphate pyrophosphatase YhdE low > 80
Escherichia coli ECRC102 0.52 NIAGMN_25930 ldhA D-lactate dehydrogenase 0.45 NIAGMN_15500 yhdE nucleoside triphosphate pyrophosphatase YhdE — —
Escherichia coli BL21 0.52 ECD_01352 fermentative D-lactate dehydrogenase, NAD-dependent 0.45 ECD_03107 dTTP/UTP pyrophosphatase; m(5)UTP/m(5)CTP/pseudo-UTP pyrophosphatase low > 61
Escherichia fergusonii Becca 0.52 EFB2_02576 D-lactate dehydrogenase 0.45 EFB2_00583 dTTP/UTP pyrophosphatase low > 86
Escherichia coli ECRC62 0.52 BNILDI_17985 ldhA D-lactate dehydrogenase 0.46 BNILDI_01995 yhdE nucleoside triphosphate pyrophosphatase YhdE low > 75
Escherichia coli ECRC101 0.52 MCAODC_16140 ldhA D-lactate dehydrogenase 0.46 MCAODC_08260 yhdE nucleoside triphosphate pyrophosphatase YhdE low > 87
Serratia liquefaciens MT49 0.51 IAI46_13355 2-hydroxyacid dehydrogenase 0.44 IAI46_22705 septum formation inhibitor Maf low > 86
Echinicola vietnamensis KMM 6221, DSM 17526 0.51 Echvi_3161 Lactate dehydrogenase and related dehydrogenases 0.28 Echvi_3964 MAF protein low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.51 CA265_RS10420 hydroxyacid dehydrogenase 0.30 CA265_RS03535 septum formation protein Maf low > 88
Klebsiella michiganensis M5al 0.51 BWI76_RS12790 lactate dehydrogenase 0.45 BWI76_RS25485 septum formation protein Maf low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF2638 D-lactate dehydrogenase (EC 1.1.1.28) 0.46 GFF2137 Septum formation protein Maf low > 78
Enterobacter asburiae PDN3 0.51 EX28DRAFT_1435 Lactate dehydrogenase and related dehydrogenases 0.46 EX28DRAFT_3298 MAF protein low > 76
Enterobacter sp. TBS_079 0.51 MPMX20_02132 D-lactate dehydrogenase 0.46 MPMX20_04154 dTTP/UTP pyrophosphatase low > 85
Dickeya dadantii 3937 0.50 DDA3937_RS12295 2-hydroxyacid dehydrogenase 0.42 DDA3937_RS01445 septum formation inhibitor Maf low > 74
Rahnella sp. WP5 0.49 EX31_RS06470 2-hydroxyacid dehydrogenase 0.43 EX31_RS12250 septum formation inhibitor Maf low > 89
Alteromonas macleodii MIT1002 0.49 MIT1002_01974 D-lactate dehydrogenase 0.41 MIT1002_00223 Maf-like protein YhdE low > 70
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_0219 Lactate dehydrogenase and related dehydrogenases 0.36 Ga0059261_1909 MAF protein low > 68
Pectobacterium carotovorum WPP14 0.48 HER17_RS09630 2-hydroxyacid dehydrogenase 0.46 HER17_RS20155 Maf-like protein low > 75
Bacteroides stercoris CC31F 0.47 HMPREF1181_RS11170 2-hydroxyacid dehydrogenase 0.27 HMPREF1181_RS05465 septum formation protein Maf low > 56
Bacteroides thetaiotaomicron VPI-5482 0.46 BT1575 putative dehydrogenase (NCBI ptt file) 0.26 BT1676 Maf protein (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.45 BACOVA_04316 4-phosphoerythronate dehydrogenase 0.27 BACOVA_04420 septum formation protein Maf low > 94
Phocaeicola dorei CL03T12C01 0.44 ABI39_RS12465 2-hydroxyacid dehydrogenase 0.26 ABI39_RS12460 septum formation protein Maf low > 72
Parabacteroides merdae CL09T00C40 0.44 HMPREF1078_RS01675 2-hydroxyacid dehydrogenase 0.29 HMPREF1078_RS00035 Maf-like protein low > 61
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS16545 2-hydroxyacid dehydrogenase 0.25 HMPREF1058_RS16540 septum formation protein Maf low > 67
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS05620 2-hydroxyacid dehydrogenase 0.27 ABZR88_RS07930 Maf family nucleotide pyrophosphatase low > 71
Fusobacterium nucleatum SB010 0.25 HUW76_07605 lactate dehydrogenase 0.29 HUW76_04640 septum formation protein Maf low > 35

Not shown: 1 genomes with orthologs for Pf1N1B4_3500 only; 37 genomes with orthologs for Pf1N1B4_1096 only